RNA–Protein interactions for RNA: ENST00000566426.1

PDXDC1-213, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 283 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-213ENST00000566426 PFASO15067 1338 aa24.88■■□□□ 1.57
PDXDC1-213ENST00000566426 USP17L10C9JJH3 530 aa24.88■■□□□ 1.57
PDXDC1-213ENST00000566426 ARID4AP29374 1257 aaPredicted RBP24.88■■□□□ 1.57
PDXDC1-213ENST00000566426 PI16Q6UXB8 463 aa24.88■■□□□ 1.57
PDXDC1-213ENST00000566426 FOXP4Q8IVH2 680 aaPredicted RBP24.88■■□□□ 1.57
PDXDC1-213ENST00000566426 UQCRFS1P1P0C7P4 283 aa24.87■■□□□ 1.57
PDXDC1-213ENST00000566426 RGS2P41220 211 aa24.87■■□□□ 1.57
PDXDC1-213ENST00000566426 CACNB2Q08289 660 aaPredicted RBP24.87■■□□□ 1.57
PDXDC1-213ENST00000566426 MTX1Q13505 466 aa24.87■■□□□ 1.57
PDXDC1-213ENST00000566426 SH3RF3Q8TEJ3 882 aaPredicted RBP24.87■■□□□ 1.57
PDXDC1-213ENST00000566426 TXNRD2Q9NNW7 524 aa24.87■■□□□ 1.57
PDXDC1-213ENST00000566426 PLXNB2O15031 1838 aa24.86■■□□□ 1.57
PDXDC1-213ENST00000566426 COL6A1P12109 1028 aa24.86■■□□□ 1.57
PDXDC1-213ENST00000566426 ERVK-9P63128 1117 aa24.86■■□□□ 1.57
PDXDC1-213ENST00000566426 ERVK-24P63145 666 aa24.86■■□□□ 1.57
PDXDC1-213ENST00000566426 CRACR2BQ8N4Y2 399 aaPredicted RBP24.86■■□□□ 1.57
PDXDC1-213ENST00000566426 CDCA7LQ96GN5 454 aa24.86■■□□□ 1.57
PDXDC1-213ENST00000566426 RBPJLQ9UBG7 517 aa24.86■■□□□ 1.57
PDXDC1-213ENST00000566426 ZNF316A6NFI3 1004 aaPredicted RBP24.85■■□□□ 1.57
PDXDC1-213ENST00000566426 NAA16Q6N069 864 aaPredicted RBP24.85■■□□□ 1.57
PDXDC1-213ENST00000566426 CWC22Q9HCG8 908 aaKnown RBP24.85■■□□□ 1.57
PDXDC1-213ENST00000566426 AATFQ9NY61 560 aaKnown RBP eCLIP24.85■■□□□ 1.57
PDXDC1-213ENST00000566426 MCAMP43121 646 aa24.84■■□□□ 1.57
PDXDC1-213ENST00000566426 G3BP1Q13283 466 aaKnown RBP eCLIP24.84■■□□□ 1.57
PDXDC1-213ENST00000566426 GPR142Q7Z601 462 aa24.84■■□□□ 1.57
PDXDC1-213ENST00000566426 PLEKHH3Q7Z736 793 aa24.84■■□□□ 1.57
PDXDC1-213ENST00000566426 METTL16Q86W50 562 aaKnown RBP24.84■■□□□ 1.57
PDXDC1-213ENST00000566426 USP6NLQ92738 828 aa24.84■■□□□ 1.57
PDXDC1-213ENST00000566426 PEX10O60683 326 aa24.83■■□□□ 1.57
PDXDC1-213ENST00000566426 PPP4CP60510 307 aa24.83■■□□□ 1.57
PDXDC1-213ENST00000566426 Q3C1V9 767 aa24.83■■□□□ 1.57
PDXDC1-213ENST00000566426 MORN1Q5T089 497 aa24.83■■□□□ 1.57
PDXDC1-213ENST00000566426 LHX8Q68G74 356 aa24.83■■□□□ 1.57
PDXDC1-213ENST00000566426 TRMT2AQ8IZ69 625 aaKnown RBP24.83■■□□□ 1.57
PDXDC1-213ENST00000566426 TGFBRAP1Q8WUH2 860 aa24.83■■□□□ 1.57
PDXDC1-213ENST00000566426 APBA2Q99767 749 aa24.83■■□□□ 1.57
PDXDC1-213ENST00000566426 PAGR1Q9BTK6 254 aa24.83■■□□□ 1.57
PDXDC1-213ENST00000566426 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.83■■□□□ 1.57
PDXDC1-213ENST00000566426 GLRX3O76003 335 aaKnown RBP24.82■■□□□ 1.56
PDXDC1-213ENST00000566426 CCND3P30281 292 aaPredicted RBP24.82■■□□□ 1.56
PDXDC1-213ENST00000566426 LRRC26Q2I0M4 334 aa24.82■■□□□ 1.56
PDXDC1-213ENST00000566426 ATF7IPQ6VMQ6 1270 aa24.82■■□□□ 1.56
PDXDC1-213ENST00000566426 ARHGAP45Q92619 1136 aa24.82■■□□□ 1.56
PDXDC1-213ENST00000566426 PORCNQ9H237 461 aa24.82■■□□□ 1.56
PDXDC1-213ENST00000566426 GDF11O95390 407 aa24.81■■□□□ 1.56
PDXDC1-213ENST00000566426 HLA-DOAP06340 250 aa24.81■■□□□ 1.56
PDXDC1-213ENST00000566426 JAG1P78504 1218 aa24.81■■□□□ 1.56
PDXDC1-213ENST00000566426 MDM2Q00987 491 aaPredicted RBP24.81■■□□□ 1.56
PDXDC1-213ENST00000566426 USP17L2Q6R6M4 530 aa24.81■■□□□ 1.56
PDXDC1-213ENST00000566426 MAPKAPK5Q8IW41 473 aa24.81■■□□□ 1.56
PDXDC1-213ENST00000566426 ZBTB21Q9ULJ3 1066 aa24.81■■□□□ 1.56
PDXDC1-213ENST00000566426 FLT1P17948 1338 aa24.81■■□□□ 1.56
PDXDC1-213ENST00000566426 IGSF3O75054 1194 aa24.8■■□□□ 1.56
PDXDC1-213ENST00000566426 CCNA1P78396 465 aa24.8■■□□□ 1.56
PDXDC1-213ENST00000566426 CCL14Q16627 93 aa24.8■■□□□ 1.56
PDXDC1-213ENST00000566426 LBHD1Q9BQE6 289 aaPredicted RBP24.8■■□□□ 1.56
PDXDC1-213ENST00000566426 DNAJC18Q9H819 358 aa24.8■■□□□ 1.56
PDXDC1-213ENST00000566426 PALD1Q9ULE6 856 aa24.8■■□□□ 1.56
PDXDC1-213ENST00000566426 MAP2K5Q13163 448 aa24.79■■□□□ 1.56
PDXDC1-213ENST00000566426 CCDC158Q5M9N0 1113 aa24.79■■□□□ 1.56
PDXDC1-213ENST00000566426 MFSD14CQ5VZR4 134 aa24.79■■□□□ 1.56
PDXDC1-213ENST00000566426 FAM109BQ6ICB4 259 aaPredicted RBP24.79■■□□□ 1.56
PDXDC1-213ENST00000566426 EDC3Q96F86 508 aaKnown RBP24.79■■□□□ 1.56
PDXDC1-213ENST00000566426 EMILIN3Q9NT22 766 aa24.79■■□□□ 1.56
PDXDC1-213ENST00000566426 RABGAP1Q9Y3P9 1069 aa24.79■■□□□ 1.56
PDXDC1-213ENST00000566426 GNAI2P04899 355 aa24.78■■□□□ 1.56
PDXDC1-213ENST00000566426 TTC39AQ5SRH9 613 aa24.78■■□□□ 1.56
PDXDC1-213ENST00000566426 MSCO60682 206 aa24.77■■□□□ 1.56
PDXDC1-213ENST00000566426 SENP6Q9GZR1 1112 aaPredicted RBP24.77■■□□□ 1.56
PDXDC1-213ENST00000566426 SNRKQ9NRH2 765 aa24.77■■□□□ 1.56
PDXDC1-213ENST00000566426 USP17L15C9J2P7 530 aa24.76■■□□□ 1.55
PDXDC1-213ENST00000566426 USP17L13C9JLJ4 530 aa24.76■■□□□ 1.55
PDXDC1-213ENST00000566426 USP17L11C9JVI0 530 aa24.76■■□□□ 1.55
PDXDC1-213ENST00000566426 USP17L18D6R9N7 530 aa24.76■■□□□ 1.55
PDXDC1-213ENST00000566426 USP17L22D6RA61 530 aa24.76■■□□□ 1.55
PDXDC1-213ENST00000566426 USP17L17D6RBQ6 530 aa24.76■■□□□ 1.55
PDXDC1-213ENST00000566426 USP17L19D6RCP7 530 aa24.76■■□□□ 1.55
PDXDC1-213ENST00000566426 USP17L20D6RJB6 530 aa24.76■■□□□ 1.55
PDXDC1-213ENST00000566426 POTEB2H3BUK9 544 aa24.76■■□□□ 1.55
PDXDC1-213ENST00000566426 RARSP54136 660 aaKnown RBP24.76■■□□□ 1.55
PDXDC1-213ENST00000566426 USP17L24Q0WX57 530 aa24.76■■□□□ 1.55
PDXDC1-213ENST00000566426 SHROOM1Q2M3G4 852 aaPredicted RBP24.76■■□□□ 1.55
PDXDC1-213ENST00000566426 FEZ1Q99689 392 aa24.76■■□□□ 1.55
PDXDC1-213ENST00000566426 PRKAG2Q9UGJ0 569 aa24.76■■□□□ 1.55
PDXDC1-213ENST00000566426 SIPA1L1O43166 1804 aa24.76■■□□□ 1.55
PDXDC1-213ENST00000566426 WDR78Q5VTH9 848 aa24.75■■□□□ 1.55
PDXDC1-213ENST00000566426 C12orf42Q96LP6 360 aa24.75■■□□□ 1.55
PDXDC1-213ENST00000566426 GPR108Q9NPR9 543 aa24.75■■□□□ 1.55
PDXDC1-213ENST00000566426 SAP30BPQ9UHR5 308 aaKnown RBP24.75■■□□□ 1.55
PDXDC1-213ENST00000566426 UNC80Q8N2C7 3258 aa24.74■■□□□ 1.55
PDXDC1-213ENST00000566426 SLC15A5A6NIM6 579 aa24.74■■□□□ 1.55
PDXDC1-213ENST00000566426 IPO8O15397 1037 aaKnown RBP24.74■■□□□ 1.55
PDXDC1-213ENST00000566426 GH2P01242 217 aa24.74■■□□□ 1.55
PDXDC1-213ENST00000566426 USP14P54578 494 aa24.74■■□□□ 1.55
PDXDC1-213ENST00000566426 ATP2B2Q01814 1243 aa24.74■■□□□ 1.55
PDXDC1-213ENST00000566426 CERS3Q8IU89 383 aa24.74■■□□□ 1.55
PDXDC1-213ENST00000566426 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.74■■□□□ 1.55
PDXDC1-213ENST00000566426 LPAR1Q92633 364 aa24.74■■□□□ 1.55
PDXDC1-213ENST00000566426 COL25A1Q9BXS0 654 aaPredicted RBP24.74■■□□□ 1.55
PDXDC1-213ENST00000566426 DDX20Q9UHI6 824 aaKnown RBP24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms