RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 C19orf81C9J6K1 198 aa20.18■□□□□ 0.82
TSR3-202ENST00000566296 EVI5O60447 810 aa20.18■□□□□ 0.82
TSR3-202ENST00000566296 CYP7A1P22680 504 aa20.18■□□□□ 0.82
TSR3-202ENST00000566296 CRISPLD2Q9H0B8 497 aa20.18■□□□□ 0.82
TSR3-202ENST00000566296 DNAJC18Q9H819 358 aa20.18■□□□□ 0.82
TSR3-202ENST00000566296 PIH1D3Q9NQM4 214 aaKnown RBP20.18■□□□□ 0.82
TSR3-202ENST00000566296 RBM27Q9P2N5 1060 aaKnown RBP20.18■□□□□ 0.82
TSR3-202ENST00000566296 DBNLQ9UJU6 430 aaKnown RBP20.18■□□□□ 0.82
TSR3-202ENST00000566296 PALD1Q9ULE6 856 aa20.18■□□□□ 0.82
TSR3-202ENST00000566296 ZBTB21Q9ULJ3 1066 aa20.18■□□□□ 0.82
TSR3-202ENST00000566296 NOP58Q9Y2X3 529 aaKnown RBP20.18■□□□□ 0.82
TSR3-202ENST00000566296 USP17L10C9JJH3 530 aa20.17■□□□□ 0.82
TSR3-202ENST00000566296 ZBTB7BO15156 539 aaPredicted RBP20.17■□□□□ 0.82
TSR3-202ENST00000566296 IDH1O75874 414 aaKnown RBP20.17■□□□□ 0.82
TSR3-202ENST00000566296 GDF11O95390 407 aa20.17■□□□□ 0.82
TSR3-202ENST00000566296 METTL16Q86W50 562 aaKnown RBP20.17■□□□□ 0.82
TSR3-202ENST00000566296 CERS3Q8IU89 383 aa20.17■□□□□ 0.82
TSR3-202ENST00000566296 SAP30BPQ9UHR5 308 aaKnown RBP20.17■□□□□ 0.82
TSR3-202ENST00000566296 ZBED9Q6R2W3 1325 aa20.17■□□□□ 0.82
TSR3-202ENST00000566296 HOXA7P31268 230 aaPredicted RBP20.16■□□□□ 0.82
TSR3-202ENST00000566296 GTF3C2Q8WUA4 911 aaPredicted RBP20.16■□□□□ 0.82
TSR3-202ENST00000566296 SOCS4Q8WXH5 440 aa20.16■□□□□ 0.82
TSR3-202ENST00000566296 CCDC8Q9H0W5 538 aaPredicted RBP20.16■□□□□ 0.82
TSR3-202ENST00000566296 TLR7Q9NYK1 1049 aaKnown RBP20.16■□□□□ 0.82
TSR3-202ENST00000566296 USP5P45974 858 aa20.15■□□□□ 0.82
TSR3-202ENST00000566296 HERVK_113P62684 666 aa20.15■□□□□ 0.82
TSR3-202ENST00000566296 DYNLL1P63167 89 aaKnown RBP20.15■□□□□ 0.82
TSR3-202ENST00000566296 PDE3AQ14432 1141 aa20.15■□□□□ 0.82
TSR3-202ENST00000566296 NECAB2Q7Z6G3 386 aa20.15■□□□□ 0.82
TSR3-202ENST00000566296 CCAR1Q8IX12 1150 aaKnown RBP20.15■□□□□ 0.82
TSR3-202ENST00000566296 ANKLE1Q8NAG6 615 aa20.15■□□□□ 0.82
TSR3-202ENST00000566296 HMX1Q9NP08 348 aaPredicted RBP20.15■□□□□ 0.82
TSR3-202ENST00000566296 GJD2Q9UKL4 321 aa20.15■□□□□ 0.82
TSR3-202ENST00000566296 RPTORQ8N122 1335 aa20.15■□□□□ 0.82
TSR3-202ENST00000566296 PLXNB2O15031 1838 aa20.15■□□□□ 0.82
TSR3-202ENST00000566296 ALPK3Q96L96 1907 aa20.14■□□□□ 0.81
TSR3-202ENST00000566296 ERC1Q8IUD2 1116 aa20.14■□□□□ 0.81
TSR3-202ENST00000566296 MIGA1Q8NAN2 632 aa20.14■□□□□ 0.81
TSR3-202ENST00000566296 GPRC5AQ8NFJ5 357 aa20.14■□□□□ 0.81
TSR3-202ENST00000566296 PAWRQ96IZ0 340 aaKnown RBP20.14■□□□□ 0.81
TSR3-202ENST00000566296 P2RX7Q99572 595 aaKnown RBP20.14■□□□□ 0.81
TSR3-202ENST00000566296 FEZ1Q99689 392 aa20.14■□□□□ 0.81
TSR3-202ENST00000566296 NUDT12Q9BQG2 462 aa20.14■□□□□ 0.81
TSR3-202ENST00000566296 CYP2B6P20813 491 aa20.13■□□□□ 0.81
TSR3-202ENST00000566296 JAG1P78504 1218 aa20.13■□□□□ 0.81
TSR3-202ENST00000566296 MAP3K12Q12852 859 aa20.13■□□□□ 0.81
TSR3-202ENST00000566296 SHROOM1Q2M3G4 852 aaPredicted RBP20.13■□□□□ 0.81
TSR3-202ENST00000566296 USP17L2Q6R6M4 530 aa20.13■□□□□ 0.81
TSR3-202ENST00000566296 MAGEB6Q8N7X4 407 aa20.13■□□□□ 0.81
TSR3-202ENST00000566296 EAF2Q96CJ1 260 aaPredicted RBP20.13■□□□□ 0.81
TSR3-202ENST00000566296 RLBP1P12271 317 aa20.12■□□□□ 0.81
TSR3-202ENST00000566296 MAPK4P31152 587 aa20.12■□□□□ 0.81
TSR3-202ENST00000566296 TMED8Q6PL24 325 aaPredicted RBP20.12■□□□□ 0.81
TSR3-202ENST00000566296 DIS3LQ8TF46 1054 aaKnown RBP20.12■□□□□ 0.81
TSR3-202ENST00000566296 TRIB2Q92519 343 aa20.12■□□□□ 0.81
TSR3-202ENST00000566296 YTHDC1Q96MU7 727 aaKnown RBP20.12■□□□□ 0.81
TSR3-202ENST00000566296 PAGR1Q9BTK6 254 aa20.12■□□□□ 0.81
TSR3-202ENST00000566296 PRO3102Q9H379 93 aa20.12■□□□□ 0.81
TSR3-202ENST00000566296 CWC22Q9HCG8 908 aaKnown RBP20.12■□□□□ 0.81
TSR3-202ENST00000566296 DDX60LQ5H9U9 1706 aaKnown RBP20.11■□□□□ 0.81
TSR3-202ENST00000566296 A0A1W2PPC1 479 aa20.11■□□□□ 0.81
TSR3-202ENST00000566296 GH2P01242 217 aa20.11■□□□□ 0.81
TSR3-202ENST00000566296 ERVK-9P63128 1117 aa20.11■□□□□ 0.81
TSR3-202ENST00000566296 ERVK-24P63145 666 aa20.11■□□□□ 0.81
TSR3-202ENST00000566296 TRIM32Q13049 653 aa20.11■□□□□ 0.81
TSR3-202ENST00000566296 CEP85Q6P2H3 762 aa20.11■□□□□ 0.81
TSR3-202ENST00000566296 AACSQ86V21 672 aa20.11■□□□□ 0.81
TSR3-202ENST00000566296 TRMT44Q8IYL2 757 aaKnown RBP20.11■□□□□ 0.81
TSR3-202ENST00000566296 TXNRD2Q9NNW7 524 aa20.11■□□□□ 0.81
TSR3-202ENST00000566296 SERPINB13Q9UIV8 391 aa20.11■□□□□ 0.81
TSR3-202ENST00000566296 NAV1Q8NEY1 1877 aa20.11■□□□□ 0.81
TSR3-202ENST00000566296 PRKAR2AP13861 404 aaKnown RBP20.1■□□□□ 0.81
TSR3-202ENST00000566296 ZKSCAN1P17029 563 aaPredicted RBP20.1■□□□□ 0.81
TSR3-202ENST00000566296 TTC6Q86TZ1 520 aa20.1■□□□□ 0.81
TSR3-202ENST00000566296 NBPF3Q9H094 633 aa20.1■□□□□ 0.81
TSR3-202ENST00000566296 EHD4Q9H223 541 aa20.1■□□□□ 0.81
TSR3-202ENST00000566296 EXOC6BQ9Y2D4 811 aa20.1■□□□□ 0.81
TSR3-202ENST00000566296 XRCC5P13010 732 aaKnown RBP20.09■□□□□ 0.81
TSR3-202ENST00000566296 RGS2P41220 211 aa20.09■□□□□ 0.81
TSR3-202ENST00000566296 USP14P54578 494 aa20.09■□□□□ 0.81
TSR3-202ENST00000566296 HSP90AB4PQ58FF6 505 aa20.09■□□□□ 0.81
TSR3-202ENST00000566296 C12orf42Q96LP6 360 aa20.09■□□□□ 0.81
TSR3-202ENST00000566296 EMILIN3Q9NT22 766 aa20.09■□□□□ 0.81
TSR3-202ENST00000566296 NDUFB9Q9Y6M9 179 aa20.09■□□□□ 0.81
TSR3-202ENST00000566296 PEX10O60683 326 aa20.08■□□□□ 0.81
TSR3-202ENST00000566296 CCNA1P78396 465 aa20.08■□□□□ 0.81
TSR3-202ENST00000566296 RAB3GAP1Q15042 981 aa20.08■□□□□ 0.81
TSR3-202ENST00000566296 ZYXQ15942 572 aaKnown RBP20.08■□□□□ 0.81
TSR3-202ENST00000566296 MAP3K21Q5TCX8 1036 aa20.08■□□□□ 0.81
TSR3-202ENST00000566296 TATDN1Q6P1N9 297 aa20.08■□□□□ 0.81
TSR3-202ENST00000566296 GPR142Q7Z601 462 aa20.08■□□□□ 0.81
TSR3-202ENST00000566296 C7orf61Q8IZ16 206 aa20.08■□□□□ 0.81
TSR3-202ENST00000566296 C11orf49Q9H6J7 331 aa20.08■□□□□ 0.81
TSR3-202ENST00000566296 CABP5Q9NP86 173 aa20.08■□□□□ 0.81
TSR3-202ENST00000566296 RBPJLQ9UBG7 517 aa20.08■□□□□ 0.81
TSR3-202ENST00000566296 RANBP2P49792 3224 aaKnown RBP20.08■□□□□ 0.8
TSR3-202ENST00000566296 USP17L15C9J2P7 530 aa20.07■□□□□ 0.8
TSR3-202ENST00000566296 USP17L13C9JLJ4 530 aa20.07■□□□□ 0.8
TSR3-202ENST00000566296 USP17L11C9JVI0 530 aa20.07■□□□□ 0.8
TSR3-202ENST00000566296 USP17L18D6R9N7 530 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms