RNA–Protein interactions for RNA: ENST00000566286.5

TCF4-232, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-232ENST00000566286 KRT40Q6A162 431 aa12.53□□□□□ -0.4
TCF4-232ENST00000566286 RSRC2Q7L4I2 434 aaKnown RBP12.53□□□□□ -0.4
TCF4-232ENST00000566286 METTL16Q86W50 562 aaKnown RBP12.53□□□□□ -0.4
TCF4-232ENST00000566286 CCDC191Q8NCU4 936 aa12.53□□□□□ -0.4
TCF4-232ENST00000566286 TMEM232C9JQI7 657 aa12.52□□□□□ -0.4
TCF4-232ENST00000566286 POLR3GO15318 223 aaPredicted RBP12.52□□□□□ -0.4
TCF4-232ENST00000566286 SEC31AO94979 1220 aaKnown RBP12.52□□□□□ -0.4
TCF4-232ENST00000566286 PPP2R2DQ66LE6 453 aa12.52□□□□□ -0.4
TCF4-232ENST00000566286 GOLGA1Q92805 767 aa12.52□□□□□ -0.4
TCF4-232ENST00000566286 MAP3K14Q99558 947 aa12.52□□□□□ -0.4
TCF4-232ENST00000566286 FAM217BQ9NTX9 383 aaPredicted RBP12.52□□□□□ -0.4
TCF4-232ENST00000566286 LIMD1Q9UGP4 676 aa12.52□□□□□ -0.4
TCF4-232ENST00000566286 KCNH3Q9ULD8 1083 aa12.52□□□□□ -0.4
TCF4-232ENST00000566286 OAS2P29728 719 aaKnown RBP12.52□□□□□ -0.41
TCF4-232ENST00000566286 SMC1AQ14683 1233 aaKnown RBP12.52□□□□□ -0.41
TCF4-232ENST00000566286 CARD10Q9BWT7 1032 aa12.52□□□□□ -0.41
TCF4-232ENST00000566286 PCDHA5Q9Y5H7 936 aa12.52□□□□□ -0.41
TCF4-232ENST00000566286 ECM29Q5VYK3 1845 aa12.51□□□□□ -0.41
TCF4-232ENST00000566286 PCDH11XQ9BZA7 1347 aa12.51□□□□□ -0.41
TCF4-232ENST00000566286 PCDH11YQ9BZA8 1340 aa12.51□□□□□ -0.41
TCF4-232ENST00000566286 GPAA1O43292 621 aa12.51□□□□□ -0.41
TCF4-232ENST00000566286 LONRF3Q496Y0 759 aa12.51□□□□□ -0.41
TCF4-232ENST00000566286 RAB11FIP4Q86YS3 637 aa12.51□□□□□ -0.41
TCF4-232ENST00000566286 IFNL1Q8IU54 200 aa12.51□□□□□ -0.41
TCF4-232ENST00000566286 PDILTQ8N807 584 aa12.51□□□□□ -0.41
TCF4-232ENST00000566286 MLKLQ8NB16 471 aa12.51□□□□□ -0.41
TCF4-232ENST00000566286 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.51□□□□□ -0.412e-6■■■■□ 26.4
TCF4-232ENST00000566286 INTS13Q9NVM9 706 aa12.51□□□□□ -0.41
TCF4-232ENST00000566286 CCDC151A5D8V7 595 aa12.5□□□□□ -0.41
TCF4-232ENST00000566286 SASH3O75995 380 aa12.5□□□□□ -0.41
TCF4-232ENST00000566286 CLSTN1O94985 981 aa12.5□□□□□ -0.41
TCF4-232ENST00000566286 GTF2E1P29083 439 aaPredicted RBP12.5□□□□□ -0.41
TCF4-232ENST00000566286 CABP4P57796 275 aa12.5□□□□□ -0.41
TCF4-232ENST00000566286 TUBB4BP68371 445 aa12.5□□□□□ -0.41
TCF4-232ENST00000566286 BRD3Q15059 726 aa12.5□□□□□ -0.41
TCF4-232ENST00000566286 TC2NQ8N9U0 490 aa12.5□□□□□ -0.41
TCF4-232ENST00000566286 TRIML1Q8N9V2 468 aa12.5□□□□□ -0.41
TCF4-232ENST00000566286 ZCRB1Q8TBF4 217 aaKnown RBP12.5□□□□□ -0.41
TCF4-232ENST00000566286 ENOX1Q8TC92 643 aaKnown RBP12.5□□□□□ -0.41
TCF4-232ENST00000566286 KIFC2Q96AC6 838 aa12.5□□□□□ -0.41
TCF4-232ENST00000566286 XAGE2Q96GT9 111 aa12.5□□□□□ -0.41
TCF4-232ENST00000566286 ZNF594Q96JF6 807 aaPredicted RBP12.5□□□□□ -0.41
TCF4-232ENST00000566286 WDR24Q96S15 920 aa12.5□□□□□ -0.41
TCF4-232ENST00000566286 ROBO1Q9Y6N7 1651 aa12.5□□□□□ -0.41
TCF4-232ENST00000566286 SH2B2O14492 632 aaPredicted RBP12.5□□□□□ -0.41
TCF4-232ENST00000566286 ZNF18P17022 549 aa12.5□□□□□ -0.41
TCF4-232ENST00000566286 TXLNAP40222 546 aa12.5□□□□□ -0.41
TCF4-232ENST00000566286 IARSP41252 1262 aaKnown RBP12.5□□□□□ -0.41
TCF4-232ENST00000566286 GOLGA8FQ08AF8 430 aa12.5□□□□□ -0.41
TCF4-232ENST00000566286 GOLGA8DPQ0D2H9 430 aa12.5□□□□□ -0.41
TCF4-232ENST00000566286 CCDC57Q2TAC2 916 aa12.5□□□□□ -0.41
TCF4-232ENST00000566286 NT5DC1Q5TFE4 455 aa12.5□□□□□ -0.41
TCF4-232ENST00000566286 NUTM2AQ8IVF1 878 aaPredicted RBP12.5□□□□□ -0.41
TCF4-232ENST00000566286 TMEM87BQ96K49 555 aa12.5□□□□□ -0.41
TCF4-232ENST00000566286 CLIC6Q96NY7 704 aa12.5□□□□□ -0.41
TCF4-232ENST00000566286 PARD6BQ9BYG5 372 aa12.5□□□□□ -0.41
TCF4-232ENST00000566286 PUS7LQ9H0K6 701 aaKnown RBP12.5□□□□□ -0.41
TCF4-232ENST00000566286 PRDM16Q9HAZ2 1276 aa12.5□□□□□ -0.41
TCF4-232ENST00000566286 UBR2Q8IWV8 1755 aa12.49□□□□□ -0.41
TCF4-232ENST00000566286 STK36Q9NRP7 1315 aa12.49□□□□□ -0.41
TCF4-232ENST00000566286 POTEB2H3BUK9 544 aa12.49□□□□□ -0.41
TCF4-232ENST00000566286 TUBB2AQ13885 445 aa12.49□□□□□ -0.41
TCF4-232ENST00000566286 APOA5Q6Q788 366 aa12.49□□□□□ -0.41
TCF4-232ENST00000566286 FOXP4Q8IVH2 680 aaPredicted RBP12.49□□□□□ -0.41
TCF4-232ENST00000566286 AIFM3Q96NN9 605 aa12.49□□□□□ -0.41
TCF4-232ENST00000566286 TUBB2BQ9BVA1 445 aa12.49□□□□□ -0.41
TCF4-232ENST00000566286 PSD3Q9NYI0 1048 aa12.49□□□□□ -0.41
TCF4-232ENST00000566286 CWC15Q9P013 229 aaKnown RBP12.49□□□□□ -0.41
TCF4-232ENST00000566286 NFE2L3Q9Y4A8 694 aa12.49□□□□□ -0.41
TCF4-232ENST00000566286 PAPPAQ13219 1627 aa12.49□□□□□ -0.41
TCF4-232ENST00000566286 ATRNO75882 1429 aa12.49□□□□□ -0.41
TCF4-232ENST00000566286 NBPF26B4DH59 902 aa12.49□□□□□ -0.41
TCF4-232ENST00000566286 ZBTB43O43298 467 aa12.49□□□□□ -0.41
TCF4-232ENST00000566286 CCDC175P0C221 793 aa12.49□□□□□ -0.41
TCF4-232ENST00000566286 IL2RBP14784 551 aa12.49□□□□□ -0.41
TCF4-232ENST00000566286 PDE4BQ07343 736 aa12.49□□□□□ -0.41
TCF4-232ENST00000566286 POSTNQ15063 836 aa12.49□□□□□ -0.41
TCF4-232ENST00000566286 NBPF14Q5TI25 921 aa12.49□□□□□ -0.41
TCF4-232ENST00000566286 KANK3Q6NY19 840 aa12.49□□□□□ -0.41
TCF4-232ENST00000566286 NBPF10Q6P3W6 841 aaKnown RBP12.49□□□□□ -0.41
TCF4-232ENST00000566286 TOGARAM2Q6ZUX3 1019 aa12.49□□□□□ -0.41
TCF4-232ENST00000566286 NBPF15Q8N660 670 aa12.49□□□□□ -0.41
TCF4-232ENST00000566286 NEK11Q8NG66 645 aa12.49□□□□□ -0.41
TCF4-232ENST00000566286 WASF1Q92558 559 aa12.49□□□□□ -0.41
TCF4-232ENST00000566286 DDX12PQ92771 950 aa12.49□□□□□ -0.41
TCF4-232ENST00000566286 SMARCE1Q969G3 411 aa12.49□□□□□ -0.41
TCF4-232ENST00000566286 EXOC4Q96A65 974 aa12.49□□□□□ -0.41
TCF4-232ENST00000566286 NAA15Q9BXJ9 866 aaKnown RBP12.49□□□□□ -0.41
TCF4-232ENST00000566286 FUT8Q9BYC5 575 aa12.49□□□□□ -0.41
TCF4-232ENST00000566286 PUS3Q9BZE2 481 aaKnown RBP12.49□□□□□ -0.41
TCF4-232ENST00000566286 STRN4Q9NRL3 753 aa12.49□□□□□ -0.41
TCF4-232ENST00000566286 RAI14Q9P0K7 980 aa12.49□□□□□ -0.41
TCF4-232ENST00000566286 MAN1B1Q9UKM7 699 aa12.49□□□□□ -0.41
TCF4-232ENST00000566286 AHDC1Q5TGY3 1603 aaPredicted RBP12.48□□□□□ -0.41
TCF4-232ENST00000566286 BMP6P22004 513 aa12.48□□□□□ -0.41
TCF4-232ENST00000566286 ZAP70P43403 619 aa12.48□□□□□ -0.41
TCF4-232ENST00000566286 RAD51AP2Q09MP3 1159 aa12.48□□□□□ -0.41
TCF4-232ENST00000566286 CT47A1Q5JQC4 288 aaPredicted RBP12.48□□□□□ -0.41
TCF4-232ENST00000566286 CCDC12Q8WUD4 166 aaPredicted RBP12.48□□□□□ -0.41
TCF4-232ENST00000566286 HNRNPLLQ8WVV9 542 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms