RNA–Protein interactions for RNA: ENST00000566279.5

TCF4-231, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-231ENST00000566279 PRAMEF18Q5VWM3 479 aa11.85□□□□□ -0.51
TCF4-231ENST00000566279 SPTY2D1Q68D10 685 aaPredicted RBP11.85□□□□□ -0.51
TCF4-231ENST00000566279 ZBED3Q96IU2 234 aaPredicted RBP11.85□□□□□ -0.51
TCF4-231ENST00000566279 RIOK1Q9BRS2 568 aaKnown RBP11.85□□□□□ -0.51
TCF4-231ENST00000566279 RBSNQ9H1K0 784 aa11.85□□□□□ -0.51
TCF4-231ENST00000566279 VEZTQ9HBM0 779 aa11.85□□□□□ -0.51
TCF4-231ENST00000566279 AATFQ9NY61 560 aaKnown RBP eCLIP11.85□□□□□ -0.51
TCF4-231ENST00000566279 KIF3AQ9Y496 699 aa11.85□□□□□ -0.51
TCF4-231ENST00000566279 MROH7-TTC4A0A0A0MT08 1334 aa11.85□□□□□ -0.51
TCF4-231ENST00000566279 PPFIA3O75145 1194 aa11.84□□□□□ -0.51
TCF4-231ENST00000566279 NASPP49321 788 aaPredicted RBP11.84□□□□□ -0.51
TCF4-231ENST00000566279 FOSBP53539 338 aa11.84□□□□□ -0.51
TCF4-231ENST00000566279 DYNLL1P63167 89 aaKnown RBP11.84□□□□□ -0.51
TCF4-231ENST00000566279 AKNAD1Q5T1N1 836 aa11.84□□□□□ -0.51
TCF4-231ENST00000566279 PNMA8AQ86V59 439 aaPredicted RBP11.84□□□□□ -0.51
TCF4-231ENST00000566279 RAB11FIP4Q86YS3 637 aa11.84□□□□□ -0.51
TCF4-231ENST00000566279 ZDHHC15Q96MV8 337 aa11.84□□□□□ -0.51
TCF4-231ENST00000566279 GLIS2Q9BZE0 524 aaPredicted RBP11.84□□□□□ -0.51
TCF4-231ENST00000566279 ZSCAN16Q9H4T2 348 aaPredicted RBP11.84□□□□□ -0.51
TCF4-231ENST00000566279 SENP2Q9HC62 589 aa11.84□□□□□ -0.51
TCF4-231ENST00000566279 SUGT1Q9Y2Z0 365 aa11.84□□□□□ -0.51
TCF4-231ENST00000566279 BAZ2AQ9UIF9 1905 aaKnown RBP11.84□□□□□ -0.51
TCF4-231ENST00000566279 CDK5RAP2Q96SN8 1893 aa11.84□□□□□ -0.51
TCF4-231ENST00000566279 TRAF5O00463 557 aa11.84□□□□□ -0.51
TCF4-231ENST00000566279 CCDC183Q5T5S1 534 aa11.84□□□□□ -0.51
TCF4-231ENST00000566279 IGDCC4Q8TDY8 1250 aa11.84□□□□□ -0.51
TCF4-231ENST00000566279 STAG1Q8WVM7 1258 aa11.84□□□□□ -0.51
TCF4-231ENST00000566279 TMEM87BQ96K49 555 aa11.84□□□□□ -0.51
TCF4-231ENST00000566279 SCAND2PQ9GZW5 306 aaPredicted RBP11.84□□□□□ -0.51
TCF4-231ENST00000566279 GAKO14976 1311 aa11.84□□□□□ -0.51
TCF4-231ENST00000566279 TCP10L2B9ZVM9 353 aa11.83□□□□□ -0.52
TCF4-231ENST00000566279 DHX16O60231 1041 aaKnown RBP11.83□□□□□ -0.52
TCF4-231ENST00000566279 TPRNQ4KMQ1 711 aa11.83□□□□□ -0.52
TCF4-231ENST00000566279 CDC42EP5Q6NZY7 148 aa11.83□□□□□ -0.52
TCF4-231ENST00000566279 HHIPL2Q6UWX4 724 aa11.83□□□□□ -0.52
TCF4-231ENST00000566279 LDHDQ86WU2 507 aa11.83□□□□□ -0.52
TCF4-231ENST00000566279 CDAN1Q8IWY9 1227 aa11.83□□□□□ -0.52
TCF4-231ENST00000566279 SDR42E1Q8WUS8 393 aa11.83□□□□□ -0.52
TCF4-231ENST00000566279 LEO1Q8WVC0 666 aaPredicted RBP11.83□□□□□ -0.52
TCF4-231ENST00000566279 CNNM2Q9H8M5 875 aa11.83□□□□□ -0.52
TCF4-231ENST00000566279 LY9Q9HBG7 655 aa11.83□□□□□ -0.52
TCF4-231ENST00000566279 TFIP11Q9UBB9 837 aaKnown RBP11.83□□□□□ -0.52
TCF4-231ENST00000566279 KDM4AO75164 1064 aa11.83□□□□□ -0.52
TCF4-231ENST00000566279 NFIAQ12857 509 aa11.83□□□□□ -0.52
TCF4-231ENST00000566279 MFSD6Q6ZSS7 791 aa11.83□□□□□ -0.52
TCF4-231ENST00000566279 SGMS1Q86VZ5 419 aa11.83□□□□□ -0.52
TCF4-231ENST00000566279 MTMR14Q8NCE2 650 aa11.83□□□□□ -0.52
TCF4-231ENST00000566279 SH3RF3Q8TEJ3 882 aaPredicted RBP11.83□□□□□ -0.52
TCF4-231ENST00000566279 KRT23Q9C075 422 aa11.83□□□□□ -0.52
TCF4-231ENST00000566279 ZSWIM5Q9P217 1185 aa11.83□□□□□ -0.52
TCF4-231ENST00000566279 ZNF70Q9UC06 446 aaPredicted RBP11.83□□□□□ -0.52
TCF4-231ENST00000566279 TOMM70O94826 608 aa11.82□□□□□ -0.52
TCF4-231ENST00000566279 ADD1P35611 737 aaKnown RBP11.82□□□□□ -0.52
TCF4-231ENST00000566279 HDLBPQ00341 1268 aaKnown RBP11.82□□□□□ -0.52
TCF4-231ENST00000566279 PPARAQ07869 468 aa11.82□□□□□ -0.52
TCF4-231ENST00000566279 TCP10Q12799 353 aa11.82□□□□□ -0.52
TCF4-231ENST00000566279 PICALMQ13492 652 aa11.82□□□□□ -0.52
TCF4-231ENST00000566279 SLC4A8Q2Y0W8 1093 aa11.82□□□□□ -0.52
TCF4-231ENST00000566279 TMEM67Q5HYA8 995 aa11.82□□□□□ -0.52
TCF4-231ENST00000566279 APOA5Q6Q788 366 aa11.82□□□□□ -0.52
TCF4-231ENST00000566279 SPATA32Q96LK8 384 aa11.82□□□□□ -0.52
TCF4-231ENST00000566279 USP40Q9NVE5 1235 aa11.82□□□□□ -0.52
TCF4-231ENST00000566279 FZD1Q9UP38 647 aa11.82□□□□□ -0.52
TCF4-231ENST00000566279 LIFRP42702 1097 aa11.81□□□□□ -0.52
TCF4-231ENST00000566279 METAP2P50579 478 aaKnown RBP eCLIP11.81□□□□□ -0.52
TCF4-231ENST00000566279 RHBDL3P58872 404 aa11.81□□□□□ -0.52
TCF4-231ENST00000566279 SPDYE2Q495Y8 402 aa11.81□□□□□ -0.52
TCF4-231ENST00000566279 CHADLQ6NUI6 762 aa11.81□□□□□ -0.52
TCF4-231ENST00000566279 DCPSQ96C86 337 aaKnown RBP11.81□□□□□ -0.52
TCF4-231ENST00000566279 DDX4Q9NQI0 724 aaKnown RBP11.81□□□□□ -0.52
TCF4-231ENST00000566279 ORC3Q9UBD5 711 aaPredicted RBP11.81□□□□□ -0.52
TCF4-231ENST00000566279 ANAPC4Q9UJX5 808 aa11.81□□□□□ -0.52
TCF4-231ENST00000566279 LAMB1P07942 1786 aa11.81□□□□□ -0.52
TCF4-231ENST00000566279 GPR75-ASB3A0A0A6YYF3 556 aa11.81□□□□□ -0.52
TCF4-231ENST00000566279 CPLX1O14810 134 aa11.81□□□□□ -0.52
TCF4-231ENST00000566279 MYO1BO43795 1136 aa11.81□□□□□ -0.52
TCF4-231ENST00000566279 SLURP2P0DP57 97 aa11.81□□□□□ -0.52
TCF4-231ENST00000566279 GSTO1P78417 241 aa11.81□□□□□ -0.52
TCF4-231ENST00000566279 GUCY1B3Q02153 619 aa11.81□□□□□ -0.52
TCF4-231ENST00000566279 KRT26Q7Z3Y9 468 aa11.81□□□□□ -0.52
TCF4-231ENST00000566279 ZFPM1Q8IX07 1006 aa11.81□□□□□ -0.52
TCF4-231ENST00000566279 TSPY26PQ9H489 355 aa11.81□□□□□ -0.52
TCF4-231ENST00000566279 ZNF408Q9H9D4 720 aa11.81□□□□□ -0.52
TCF4-231ENST00000566279 IFIT3O14879 490 aaKnown RBP11.8□□□□□ -0.52
TCF4-231ENST00000566279 ZBTB43O43298 467 aa11.8□□□□□ -0.52
TCF4-231ENST00000566279 RXRAP19793 462 aa11.8□□□□□ -0.52
TCF4-231ENST00000566279 RRP12Q5JTH9 1297 aaKnown RBP11.8□□□□□ -0.52
TCF4-231ENST00000566279 MICU3Q86XE3 530 aa11.8□□□□□ -0.52
TCF4-231ENST00000566279 FAM163AQ96GL9 167 aaPredicted RBP11.8□□□□□ -0.52
TCF4-231ENST00000566279 MRIQ9BWK5 157 aa11.8□□□□□ -0.52
TCF4-231ENST00000566279 TMEM39BQ9GZU3 492 aa11.8□□□□□ -0.52
TCF4-231ENST00000566279 RNF41Q9H4P4 317 aaPredicted RBP11.8□□□□□ -0.52
TCF4-231ENST00000566279 PGAP2Q9UHJ9 254 aa11.8□□□□□ -0.52
TCF4-231ENST00000566279 CNTNAP1P78357 1384 aa11.8□□□□□ -0.52
TCF4-231ENST00000566279 NID2Q14112 1375 aa11.8□□□□□ -0.52
TCF4-231ENST00000566279 FOCADQ5VW36 1801 aa11.8□□□□□ -0.52
TCF4-231ENST00000566279 MINDY4BA8MYZ0 360 aa11.8□□□□□ -0.52
TCF4-231ENST00000566279 SMIM22K7EJ46 135 aa11.8□□□□□ -0.52
TCF4-231ENST00000566279 WDHD1O75717 1129 aaPredicted RBP11.8□□□□□ -0.52
TCF4-231ENST00000566279 ITGBL1O95965 494 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms