RNA–Protein interactions for RNA: ENST00000566133.1

FANCA-219, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-219ENST00000566133 COL2A1P02458 1487 aaPredicted RBP13.7□□□□□ -0.22
FANCA-219ENST00000566133 USP17L10C9JJH3 530 aa13.7□□□□□ -0.22
FANCA-219ENST00000566133 H0YGN5 161 aa13.7□□□□□ -0.22
FANCA-219ENST00000566133 GDF11O95390 407 aa13.7□□□□□ -0.22
FANCA-219ENST00000566133 TFRCP02786 760 aaKnown RBP13.7□□□□□ -0.22
FANCA-219ENST00000566133 INHAP05111 366 aa13.7□□□□□ -0.22
FANCA-219ENST00000566133 HOXD11P31277 338 aaPredicted RBP13.7□□□□□ -0.22
FANCA-219ENST00000566133 MAP3K12Q12852 859 aa13.7□□□□□ -0.22
FANCA-219ENST00000566133 MTMR2Q13614 643 aa13.7□□□□□ -0.22
FANCA-219ENST00000566133 HSP90AB4PQ58FF6 505 aa13.7□□□□□ -0.22
FANCA-219ENST00000566133 RHPN1Q8TCX5 695 aa13.7□□□□□ -0.22
FANCA-219ENST00000566133 GINM1Q9NU53 330 aa13.7□□□□□ -0.22
FANCA-219ENST00000566133 COLQQ9Y215 455 aaPredicted RBP13.7□□□□□ -0.22
FANCA-219ENST00000566133 CENPFP49454 3210 aa13.69□□□□□ -0.22
FANCA-219ENST00000566133 HOXA7P31268 230 aaPredicted RBP13.69□□□□□ -0.22
FANCA-219ENST00000566133 IRX3P78415 501 aaPredicted RBP13.69□□□□□ -0.22
FANCA-219ENST00000566133 SHROOM1Q2M3G4 852 aaPredicted RBP13.69□□□□□ -0.22
FANCA-219ENST00000566133 DEFB118Q96PH6 123 aa13.69□□□□□ -0.22
FANCA-219ENST00000566133 GJD2Q9UKL4 321 aa13.69□□□□□ -0.22
FANCA-219ENST00000566133 HTTP42858 3142 aa13.68□□□□□ -0.22
FANCA-219ENST00000566133 RBBP6Q7Z6E9 1792 aaKnown RBP13.68□□□□□ -0.22
FANCA-219ENST00000566133 ZBED9Q6R2W3 1325 aa13.68□□□□□ -0.22
FANCA-219ENST00000566133 APBB1O00213 710 aa13.68□□□□□ -0.22
FANCA-219ENST00000566133 TTC6Q86TZ1 520 aa13.68□□□□□ -0.22
FANCA-219ENST00000566133 CERS3Q8IU89 383 aa13.68□□□□□ -0.22
FANCA-219ENST00000566133 RPAP2Q8IXW5 612 aaPredicted RBP13.68□□□□□ -0.22
FANCA-219ENST00000566133 CLASRPQ8N2M8 674 aaKnown RBP13.68□□□□□ -0.22
FANCA-219ENST00000566133 HTATIP2Q9BUP3 242 aa13.68□□□□□ -0.22
FANCA-219ENST00000566133 ZBTB21Q9ULJ3 1066 aa13.68□□□□□ -0.22
FANCA-219ENST00000566133 PEX10O60683 326 aa13.67□□□□□ -0.22
FANCA-219ENST00000566133 GH2P01242 217 aa13.67□□□□□ -0.22
FANCA-219ENST00000566133 TTF1Q15361 905 aaPredicted RBP13.67□□□□□ -0.22
FANCA-219ENST00000566133 Q3C1V9 767 aa13.67□□□□□ -0.22
FANCA-219ENST00000566133 TATDN1Q6P1N9 297 aa13.67□□□□□ -0.22
FANCA-219ENST00000566133 UBE2Q1Q7Z7E8 422 aa13.67□□□□□ -0.22
FANCA-219ENST00000566133 GPRC5AQ8NFJ5 357 aa13.67□□□□□ -0.22
FANCA-219ENST00000566133 EMILIN3Q9NT22 766 aa13.67□□□□□ -0.22
FANCA-219ENST00000566133 SERPINB13Q9UIV8 391 aa13.67□□□□□ -0.22
FANCA-219ENST00000566133 COG6Q9Y2V7 657 aa13.67□□□□□ -0.22
FANCA-219ENST00000566133 DOCK1Q14185 1865 aa13.67□□□□□ -0.22
FANCA-219ENST00000566133 CDK5RAP2Q96SN8 1893 aa13.67□□□□□ -0.22
FANCA-219ENST00000566133 PHIPQ8WWQ0 1821 aa13.67□□□□□ -0.22
FANCA-219ENST00000566133 FARP2O94887 1054 aaPredicted RBP13.66□□□□□ -0.22
FANCA-219ENST00000566133 POLR3DP05423 398 aaPredicted RBP13.66□□□□□ -0.22
FANCA-219ENST00000566133 IFIT2P09913 472 aaKnown RBP13.66□□□□□ -0.22
FANCA-219ENST00000566133 CAPN2P17655 700 aa13.66□□□□□ -0.22
FANCA-219ENST00000566133 CYP2B6P20813 491 aa13.66□□□□□ -0.22
FANCA-219ENST00000566133 HERVK_113P62684 666 aa13.66□□□□□ -0.22
FANCA-219ENST00000566133 RAB3GAP1Q15042 981 aa13.66□□□□□ -0.22
FANCA-219ENST00000566133 CERKLQ49MI3 558 aaPredicted RBP13.66□□□□□ -0.22
FANCA-219ENST00000566133 SLC9C2Q5TAH2 1124 aa13.66□□□□□ -0.22
FANCA-219ENST00000566133 TMED8Q6PL24 325 aaPredicted RBP13.66□□□□□ -0.22
FANCA-219ENST00000566133 USP17L2Q6R6M4 530 aa13.66□□□□□ -0.22
FANCA-219ENST00000566133 CCAR1Q8IX12 1150 aaKnown RBP13.66□□□□□ -0.22
FANCA-219ENST00000566133 KIF1BPQ96EK5 621 aa13.66□□□□□ -0.22
FANCA-219ENST00000566133 TXNRD2Q9NNW7 524 aa13.66□□□□□ -0.22
FANCA-219ENST00000566133 CABP5Q9NP86 173 aa13.66□□□□□ -0.22
FANCA-219ENST00000566133 RBPJLQ9UBG7 517 aa13.66□□□□□ -0.22
FANCA-219ENST00000566133 MORF4L1Q9UBU8 362 aa13.66□□□□□ -0.22
FANCA-219ENST00000566133 DDX19BQ9UMR2 479 aa13.66□□□□□ -0.22
FANCA-219ENST00000566133 PTPRFP10586 1907 aa13.66□□□□□ -0.22
FANCA-219ENST00000566133 MKI67P46013 3256 aaKnown RBP13.65□□□□□ -0.22
FANCA-219ENST00000566133 MAGEB6P1A0A0J9YX57 407 aa13.65□□□□□ -0.22
FANCA-219ENST00000566133 HMMRO75330 724 aa13.65□□□□□ -0.22
FANCA-219ENST00000566133 MYCNP04198 464 aaPredicted RBP13.65□□□□□ -0.22
FANCA-219ENST00000566133 PLCD1P51178 756 aa13.65□□□□□ -0.22
FANCA-219ENST00000566133 ZYXQ15942 572 aaKnown RBP13.65□□□□□ -0.22
FANCA-219ENST00000566133 DNAJC2Q99543 621 aaKnown RBP13.65□□□□□ -0.22
FANCA-219ENST00000566133 NUDT12Q9BQG2 462 aa13.65□□□□□ -0.22
FANCA-219ENST00000566133 RIOK1Q9BRS2 568 aaKnown RBP13.65□□□□□ -0.22
FANCA-219ENST00000566133 HMX1Q9NP08 348 aaPredicted RBP13.65□□□□□ -0.22
FANCA-219ENST00000566133 PAK6Q9NQU5 681 aaPredicted RBP13.65□□□□□ -0.22
FANCA-219ENST00000566133 ZBTB40Q9NUA8 1239 aa13.65□□□□□ -0.22
FANCA-219ENST00000566133 NR2E3Q9Y5X4 410 aa13.65□□□□□ -0.22
FANCA-219ENST00000566133 RPTORQ8N122 1335 aa13.64□□□□□ -0.23
FANCA-219ENST00000566133 DOCK3Q8IZD9 2030 aa13.64□□□□□ -0.23
FANCA-219ENST00000566133 MGAMO43451 1857 aa13.64□□□□□ -0.23
FANCA-219ENST00000566133 GOLIM4O00461 696 aa13.64□□□□□ -0.23
FANCA-219ENST00000566133 RAB11FIP3O75154 756 aa13.64□□□□□ -0.23
FANCA-219ENST00000566133 HMGCRP04035 888 aa13.64□□□□□ -0.23
FANCA-219ENST00000566133 TRIM32Q13049 653 aa13.64□□□□□ -0.23
FANCA-219ENST00000566133 ABCB5Q2M3G0 1257 aa13.64□□□□□ -0.23
FANCA-219ENST00000566133 CHRDL2Q6WN34 429 aa13.64□□□□□ -0.23
FANCA-219ENST00000566133 SIRT2Q8IXJ6 389 aa13.64□□□□□ -0.23
FANCA-219ENST00000566133 PAWRQ96IZ0 340 aaKnown RBP13.64□□□□□ -0.23
FANCA-219ENST00000566133 PAGR1Q9BTK6 254 aa13.64□□□□□ -0.23
FANCA-219ENST00000566133 EHD4Q9H223 541 aa13.64□□□□□ -0.23
FANCA-219ENST00000566133 SIPA1L1O43166 1804 aa13.64□□□□□ -0.23
FANCA-219ENST00000566133 BRCA2P51587 3418 aa13.63□□□□□ -0.23
FANCA-219ENST00000566133 USP17L15C9J2P7 530 aa13.63□□□□□ -0.23
FANCA-219ENST00000566133 USP17L13C9JLJ4 530 aa13.63□□□□□ -0.23
FANCA-219ENST00000566133 USP17L11C9JVI0 530 aa13.63□□□□□ -0.23
FANCA-219ENST00000566133 USP17L18D6R9N7 530 aa13.63□□□□□ -0.23
FANCA-219ENST00000566133 USP17L22D6RA61 530 aa13.63□□□□□ -0.23
FANCA-219ENST00000566133 USP17L17D6RBQ6 530 aa13.63□□□□□ -0.23
FANCA-219ENST00000566133 USP17L19D6RCP7 530 aa13.63□□□□□ -0.23
FANCA-219ENST00000566133 USP17L20D6RJB6 530 aa13.63□□□□□ -0.23
FANCA-219ENST00000566133 PDE6AP16499 860 aa13.63□□□□□ -0.23
FANCA-219ENST00000566133 MAPK4P31152 587 aa13.63□□□□□ -0.23
FANCA-219ENST00000566133 FXR1P51114 621 aaKnown RBP eCLIP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms