RNA–Protein interactions for RNA: ENST00000566052.1

IFT140-207, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 544 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-207ENST00000566052 CRISPLD2Q9H0B8 497 aa18.14■□□□□ 0.49
IFT140-207ENST00000566052 PALD1Q9ULE6 856 aa18.14■□□□□ 0.49
IFT140-207ENST00000566052 HNRNPUQ00839 825 aaKnown RBP eCLIP18.13■□□□□ 0.49
IFT140-207ENST00000566052 MTMR2Q13614 643 aa18.13■□□□□ 0.49
IFT140-207ENST00000566052 ITPRIPQ8IWB1 547 aa18.13■□□□□ 0.49
IFT140-207ENST00000566052 TLR7Q9NYK1 1049 aaKnown RBP18.13■□□□□ 0.49
IFT140-207ENST00000566052 CRACR2BQ8N4Y2 399 aaPredicted RBP18.12■□□□□ 0.49
IFT140-207ENST00000566052 DEFB118Q96PH6 123 aa18.12■□□□□ 0.49
IFT140-207ENST00000566052 CCDC8Q9H0W5 538 aaPredicted RBP18.12■□□□□ 0.49
IFT140-207ENST00000566052 CYP7A1P22680 504 aa18.11■□□□□ 0.49
IFT140-207ENST00000566052 DYNLL1P63167 89 aaKnown RBP18.11■□□□□ 0.49
IFT140-207ENST00000566052 CEP85Q6P2H3 762 aa18.11■□□□□ 0.49
IFT140-207ENST00000566052 P2RX7Q99572 595 aaKnown RBP18.11■□□□□ 0.49
IFT140-207ENST00000566052 PRO3102Q9H379 93 aa18.11■□□□□ 0.49
IFT140-207ENST00000566052 TMOD4Q9NZQ9 345 aa18.11■□□□□ 0.49
IFT140-207ENST00000566052 ZBTB21Q9ULJ3 1066 aa18.11■□□□□ 0.49
IFT140-207ENST00000566052 NR2E3Q9Y5X4 410 aa18.11■□□□□ 0.49
IFT140-207ENST00000566052 ALPK3Q96L96 1907 aa18.11■□□□□ 0.49
IFT140-207ENST00000566052 USP17L10C9JJH3 530 aa18.1■□□□□ 0.49
IFT140-207ENST00000566052 TFRCP02786 760 aaKnown RBP18.1■□□□□ 0.49
IFT140-207ENST00000566052 HMGCRP04035 888 aa18.1■□□□□ 0.49
IFT140-207ENST00000566052 HLA-DOAP06340 250 aa18.1■□□□□ 0.49
IFT140-207ENST00000566052 IRX3P78415 501 aaPredicted RBP18.1■□□□□ 0.49
IFT140-207ENST00000566052 SHROOM1Q2M3G4 852 aaPredicted RBP18.1■□□□□ 0.49
IFT140-207ENST00000566052 TATDN1Q6P1N9 297 aa18.1■□□□□ 0.49
IFT140-207ENST00000566052 CHRDL2Q6WN34 429 aa18.1■□□□□ 0.49
IFT140-207ENST00000566052 TRIM34Q9BYJ4 488 aa18.1■□□□□ 0.49
IFT140-207ENST00000566052 TAOK2Q9UL54 1235 aa18.1■□□□□ 0.49
IFT140-207ENST00000566052 IDH1O75874 414 aaKnown RBP18.09■□□□□ 0.49
IFT140-207ENST00000566052 GDF11O95390 407 aa18.09■□□□□ 0.49
IFT140-207ENST00000566052 HERVK_113P62684 666 aa18.09■□□□□ 0.49
IFT140-207ENST00000566052 ERC1Q8IUD2 1116 aa18.09■□□□□ 0.49
IFT140-207ENST00000566052 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.09■□□□□ 0.49
IFT140-207ENST00000566052 EHD4Q9H223 541 aa18.09■□□□□ 0.49
IFT140-207ENST00000566052 SAP30BPQ9UHR5 308 aaKnown RBP18.09■□□□□ 0.49
IFT140-207ENST00000566052 RPTORQ8N122 1335 aa18.08■□□□□ 0.49
IFT140-207ENST00000566052 MAP3K12Q12852 859 aa18.08■□□□□ 0.48
IFT140-207ENST00000566052 MIER1Q8N108 512 aa18.08■□□□□ 0.48
IFT140-207ENST00000566052 MAGEB6Q8N7X4 407 aa18.08■□□□□ 0.48
IFT140-207ENST00000566052 ANKLE1Q8NAG6 615 aa18.08■□□□□ 0.48
IFT140-207ENST00000566052 GPRC5AQ8NFJ5 357 aa18.08■□□□□ 0.48
IFT140-207ENST00000566052 TXNRD2Q9NNW7 524 aa18.08■□□□□ 0.48
IFT140-207ENST00000566052 EMILIN3Q9NT22 766 aa18.08■□□□□ 0.48
IFT140-207ENST00000566052 RBM27Q9P2N5 1060 aaKnown RBP18.08■□□□□ 0.48
IFT140-207ENST00000566052 RBPJLQ9UBG7 517 aa18.08■□□□□ 0.48
IFT140-207ENST00000566052 DDX60LQ5H9U9 1706 aaKnown RBP18.08■□□□□ 0.48
IFT140-207ENST00000566052 XRCC5P13010 732 aaKnown RBP18.07■□□□□ 0.48
IFT140-207ENST00000566052 MIGA1Q8NAN2 632 aa18.07■□□□□ 0.48
IFT140-207ENST00000566052 GTF3C2Q8WUA4 911 aaPredicted RBP18.07■□□□□ 0.48
IFT140-207ENST00000566052 ANTXR1Q9H6X2 564 aa18.07■□□□□ 0.48
IFT140-207ENST00000566052 SERPINB13Q9UIV8 391 aa18.07■□□□□ 0.48
IFT140-207ENST00000566052 ZBED9Q6R2W3 1325 aa18.06■□□□□ 0.48
IFT140-207ENST00000566052 GH2P01242 217 aa18.06■□□□□ 0.48
IFT140-207ENST00000566052 USP5P45974 858 aa18.06■□□□□ 0.48
IFT140-207ENST00000566052 HSP90AB4PQ58FF6 505 aa18.06■□□□□ 0.48
IFT140-207ENST00000566052 MAP3K21Q5TCX8 1036 aa18.06■□□□□ 0.48
IFT140-207ENST00000566052 USP17L2Q6R6M4 530 aa18.06■□□□□ 0.48
IFT140-207ENST00000566052 POTEEQ6S8J3 1075 aa18.06■□□□□ 0.48
IFT140-207ENST00000566052 AACSQ86V21 672 aa18.06■□□□□ 0.48
IFT140-207ENST00000566052 PANK1Q8TE04 598 aa18.06■□□□□ 0.48
IFT140-207ENST00000566052 PAWRQ96IZ0 340 aaKnown RBP18.06■□□□□ 0.48
IFT140-207ENST00000566052 C12orf42Q96LP6 360 aa18.06■□□□□ 0.48
IFT140-207ENST00000566052 RIOK1Q9BRS2 568 aaKnown RBP18.06■□□□□ 0.48
IFT140-207ENST00000566052 HMX1Q9NP08 348 aaPredicted RBP18.06■□□□□ 0.48
IFT140-207ENST00000566052 EXOC6BQ9Y2D4 811 aa18.06■□□□□ 0.48
IFT140-207ENST00000566052 NDUFB9Q9Y6M9 179 aa18.06■□□□□ 0.48
IFT140-207ENST00000566052 EVI5O60447 810 aa18.05■□□□□ 0.48
IFT140-207ENST00000566052 MAPK4P31152 587 aa18.05■□□□□ 0.48
IFT140-207ENST00000566052 ERVK-9P63128 1117 aa18.05■□□□□ 0.48
IFT140-207ENST00000566052 ERVK-24P63145 666 aa18.05■□□□□ 0.48
IFT140-207ENST00000566052 TRIM32Q13049 653 aa18.05■□□□□ 0.48
IFT140-207ENST00000566052 NECAB2Q7Z6G3 386 aa18.05■□□□□ 0.48
IFT140-207ENST00000566052 TTC6Q86TZ1 520 aa18.05■□□□□ 0.48
IFT140-207ENST00000566052 SOCS4Q8WXH5 440 aa18.05■□□□□ 0.48
IFT140-207ENST00000566052 TRIB2Q92519 343 aa18.05■□□□□ 0.48
IFT140-207ENST00000566052 USP6NLQ92738 828 aa18.05■□□□□ 0.48
IFT140-207ENST00000566052 NUDT12Q9BQG2 462 aa18.05■□□□□ 0.48
IFT140-207ENST00000566052 NAV1Q8NEY1 1877 aa18.05■□□□□ 0.48
IFT140-207ENST00000566052 PEX10O60683 326 aa18.04■□□□□ 0.48
IFT140-207ENST00000566052 TTF1Q15361 905 aaPredicted RBP18.04■□□□□ 0.48
IFT140-207ENST00000566052 Q3C1V9 767 aa18.04■□□□□ 0.48
IFT140-207ENST00000566052 TRMT44Q8IYL2 757 aaKnown RBP18.04■□□□□ 0.48
IFT140-207ENST00000566052 RHPN1Q8TCX5 695 aa18.04■□□□□ 0.48
IFT140-207ENST00000566052 LAMA3Q16787 3333 aa18.03■□□□□ 0.48
IFT140-207ENST00000566052 A0A1W2PPC1 479 aa18.03■□□□□ 0.48
IFT140-207ENST00000566052 MS4A1P11836 297 aa18.03■□□□□ 0.48
IFT140-207ENST00000566052 CYP2B6P20813 491 aa18.03■□□□□ 0.48
IFT140-207ENST00000566052 MNX1P50219 401 aaPredicted RBP18.03■□□□□ 0.48
IFT140-207ENST00000566052 USP14P54578 494 aa18.03■□□□□ 0.48
IFT140-207ENST00000566052 DIS3LQ8TF46 1054 aaKnown RBP18.03■□□□□ 0.48
IFT140-207ENST00000566052 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.03■□□□□ 0.48
IFT140-207ENST00000566052 KIAA1683Q9H0B3 1180 aa18.03■□□□□ 0.48
IFT140-207ENST00000566052 PORCNQ9H237 461 aa18.03■□□□□ 0.48
IFT140-207ENST00000566052 OGDHLQ9ULD0 1010 aa18.03■□□□□ 0.48
IFT140-207ENST00000566052 USP17L15C9J2P7 530 aa18.02■□□□□ 0.48
IFT140-207ENST00000566052 USP17L13C9JLJ4 530 aa18.02■□□□□ 0.48
IFT140-207ENST00000566052 USP17L11C9JVI0 530 aa18.02■□□□□ 0.48
IFT140-207ENST00000566052 USP17L18D6R9N7 530 aa18.02■□□□□ 0.48
IFT140-207ENST00000566052 USP17L22D6RA61 530 aa18.02■□□□□ 0.48
IFT140-207ENST00000566052 USP17L17D6RBQ6 530 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms