RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 P2RX7Q99572 595 aaKnown RBP10.5□□□□□ -0.73
CAPN3-213ENST00000565173 ANTXR1Q9H6X2 564 aa10.5□□□□□ -0.73
CAPN3-213ENST00000565173 MORF4L1Q9UBU8 362 aa10.5□□□□□ -0.73
CAPN3-213ENST00000565173 SAP30BPQ9UHR5 308 aaKnown RBP10.5□□□□□ -0.73
CAPN3-213ENST00000565173 NDUFB9Q9Y6M9 179 aa10.5□□□□□ -0.73
CAPN3-213ENST00000565173 PEX10O60683 326 aa10.49□□□□□ -0.73
CAPN3-213ENST00000565173 GDF11O95390 407 aa10.49□□□□□ -0.73
CAPN3-213ENST00000565173 CYP7A1P22680 504 aa10.49□□□□□ -0.73
CAPN3-213ENST00000565173 PABPC4Q13310 644 aaKnown RBP eCLIP10.49□□□□□ -0.73
CAPN3-213ENST00000565173 TATDN1Q6P1N9 297 aa10.49□□□□□ -0.73
CAPN3-213ENST00000565173 PANK1Q8TE04 598 aa10.49□□□□□ -0.73
CAPN3-213ENST00000565173 DEFB118Q96PH6 123 aa10.49□□□□□ -0.73
CAPN3-213ENST00000565173 CRISPLD2Q9H0B8 497 aa10.49□□□□□ -0.73
CAPN3-213ENST00000565173 PRO3102Q9H379 93 aa10.49□□□□□ -0.73
CAPN3-213ENST00000565173 AS3MTQ9HBK9 375 aa10.49□□□□□ -0.73
CAPN3-213ENST00000565173 EMILIN3Q9NT22 766 aa10.49□□□□□ -0.73
CAPN3-213ENST00000565173 GINM1Q9NU53 330 aa10.49□□□□□ -0.73
CAPN3-213ENST00000565173 C19orf81C9J6K1 198 aa10.48□□□□□ -0.73
CAPN3-213ENST00000565173 IDH1O75874 414 aaKnown RBP10.48□□□□□ -0.73
CAPN3-213ENST00000565173 FARP2O94887 1054 aaPredicted RBP10.48□□□□□ -0.73
CAPN3-213ENST00000565173 TFRCP02786 760 aaKnown RBP10.48□□□□□ -0.73
CAPN3-213ENST00000565173 CRACR2BQ8N4Y2 399 aaPredicted RBP10.48□□□□□ -0.73
CAPN3-213ENST00000565173 MAGEB6Q8N7X4 407 aa10.48□□□□□ -0.73
CAPN3-213ENST00000565173 MIGA1Q8NAN2 632 aa10.48□□□□□ -0.73
CAPN3-213ENST00000565173 TXNRD2Q9NNW7 524 aa10.48□□□□□ -0.73
CAPN3-213ENST00000565173 RBPJLQ9UBG7 517 aa10.48□□□□□ -0.73
CAPN3-213ENST00000565173 ZBTB21Q9ULJ3 1066 aa10.48□□□□□ -0.73
CAPN3-213ENST00000565173 EXOC6BQ9Y2D4 811 aa10.48□□□□□ -0.73
CAPN3-213ENST00000565173 PLXNB2O15031 1838 aa10.47□□□□□ -0.73
CAPN3-213ENST00000565173 USP17L10C9JJH3 530 aa10.47□□□□□ -0.73
CAPN3-213ENST00000565173 GH2P01242 217 aa10.47□□□□□ -0.73
CAPN3-213ENST00000565173 CAPN2P17655 700 aa10.47□□□□□ -0.73
CAPN3-213ENST00000565173 HERVK_113P62684 666 aa10.47□□□□□ -0.73
CAPN3-213ENST00000565173 TRIM32Q13049 653 aa10.47□□□□□ -0.73
CAPN3-213ENST00000565173 Q3C1V9 767 aa10.47□□□□□ -0.73
CAPN3-213ENST00000565173 CHRDL2Q6WN34 429 aa10.47□□□□□ -0.73
CAPN3-213ENST00000565173 AACSQ86V21 672 aa10.47□□□□□ -0.73
CAPN3-213ENST00000565173 SIRT2Q8IXJ6 389 aa10.47□□□□□ -0.73
CAPN3-213ENST00000565173 RIOK1Q9BRS2 568 aaKnown RBP10.47□□□□□ -0.73
CAPN3-213ENST00000565173 HTATIP2Q9BUP3 242 aa10.47□□□□□ -0.73
CAPN3-213ENST00000565173 TMOD4Q9NZQ9 345 aa10.47□□□□□ -0.73
CAPN3-213ENST00000565173 RBM27Q9P2N5 1060 aaKnown RBP10.47□□□□□ -0.73
CAPN3-213ENST00000565173 TAOK2Q9UL54 1235 aa10.47□□□□□ -0.73
CAPN3-213ENST00000565173 ZBED9Q6R2W3 1325 aa10.47□□□□□ -0.73
CAPN3-213ENST00000565173 TRIOBPQ9H2D6 2365 aa10.46□□□□□ -0.73
CAPN3-213ENST00000565173 HMGCRP04035 888 aa10.46□□□□□ -0.73
CAPN3-213ENST00000565173 HLA-DOAP06340 250 aa10.46□□□□□ -0.73
CAPN3-213ENST00000565173 MNX1P50219 401 aaPredicted RBP10.46□□□□□ -0.73
CAPN3-213ENST00000565173 PLCD1P51178 756 aa10.46□□□□□ -0.73
CAPN3-213ENST00000565173 IRX3P78415 501 aaPredicted RBP10.46□□□□□ -0.73
CAPN3-213ENST00000565173 MAP3K12Q12852 859 aa10.46□□□□□ -0.73
CAPN3-213ENST00000565173 TMED8Q6PL24 325 aaPredicted RBP10.46□□□□□ -0.73
CAPN3-213ENST00000565173 CERS3Q8IU89 383 aa10.46□□□□□ -0.73
CAPN3-213ENST00000565173 ERC1Q8IUD2 1116 aa10.46□□□□□ -0.73
CAPN3-213ENST00000565173 GPRC5AQ8NFJ5 357 aa10.46□□□□□ -0.73
CAPN3-213ENST00000565173 RHPN1Q8TCX5 695 aa10.46□□□□□ -0.73
CAPN3-213ENST00000565173 USP6NLQ92738 828 aa10.46□□□□□ -0.73
CAPN3-213ENST00000565173 PAWRQ96IZ0 340 aaKnown RBP10.46□□□□□ -0.73
CAPN3-213ENST00000565173 TRIM34Q9BYJ4 488 aa10.46□□□□□ -0.73
CAPN3-213ENST00000565173 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.46□□□□□ -0.73
CAPN3-213ENST00000565173 EHD4Q9H223 541 aa10.46□□□□□ -0.73
CAPN3-213ENST00000565173 IL1RAPL2Q9NP60 686 aa10.46□□□□□ -0.73
CAPN3-213ENST00000565173 SERPINB13Q9UIV8 391 aa10.46□□□□□ -0.73
CAPN3-213ENST00000565173 RPTORQ8N122 1335 aa10.46□□□□□ -0.73
CAPN3-213ENST00000565173 LAMA2P24043 3122 aaKnown RBP10.46□□□□□ -0.74
CAPN3-213ENST00000565173 COL6A3P12111 3177 aa10.46□□□□□ -0.74
CAPN3-213ENST00000565173 CNMDO75829 334 aa10.45□□□□□ -0.74
CAPN3-213ENST00000565173 XRCC5P13010 732 aaKnown RBP10.45□□□□□ -0.74
CAPN3-213ENST00000565173 SHMT1P34896 483 aa10.45□□□□□ -0.74
CAPN3-213ENST00000565173 USP5P45974 858 aa10.45□□□□□ -0.74
CAPN3-213ENST00000565173 EVX2Q03828 476 aa10.45□□□□□ -0.74
CAPN3-213ENST00000565173 MAP3K21Q5TCX8 1036 aa10.45□□□□□ -0.74
CAPN3-213ENST00000565173 DIEXFQ68CQ4 756 aaKnown RBP10.45□□□□□ -0.74
CAPN3-213ENST00000565173 USP17L2Q6R6M4 530 aa10.45□□□□□ -0.74
CAPN3-213ENST00000565173 DIS3LQ8TF46 1054 aaKnown RBP10.45□□□□□ -0.74
CAPN3-213ENST00000565173 TRIB2Q92519 343 aa10.45□□□□□ -0.74
CAPN3-213ENST00000565173 C12orf42Q96LP6 360 aa10.45□□□□□ -0.74
CAPN3-213ENST00000565173 PORCNQ9H237 461 aa10.45□□□□□ -0.74
CAPN3-213ENST00000565173 HMX1Q9NP08 348 aaPredicted RBP10.45□□□□□ -0.74
CAPN3-213ENST00000565173 ZBTB40Q9NUA8 1239 aa10.45□□□□□ -0.74
CAPN3-213ENST00000565173 MYH1P12882 1939 aa10.45□□□□□ -0.74
CAPN3-213ENST00000565173 TCRBV5S4A2TA0A5A2 114 aa10.44□□□□□ -0.74
CAPN3-213ENST00000565173 CYP2B6P20813 491 aa10.44□□□□□ -0.74
CAPN3-213ENST00000565173 GUCY1A2P33402 732 aa10.44□□□□□ -0.74
CAPN3-213ENST00000565173 ERVK-9P63128 1117 aa10.44□□□□□ -0.74
CAPN3-213ENST00000565173 ERVK-24P63145 666 aa10.44□□□□□ -0.74
CAPN3-213ENST00000565173 GABPAQ06546 454 aa10.44□□□□□ -0.74
CAPN3-213ENST00000565173 CERKLQ49MI3 558 aaPredicted RBP10.44□□□□□ -0.74
CAPN3-213ENST00000565173 HSP90AB4PQ58FF6 505 aa10.44□□□□□ -0.74
CAPN3-213ENST00000565173 MORN1Q5T089 497 aa10.44□□□□□ -0.74
CAPN3-213ENST00000565173 ACER1Q8TDN7 264 aa10.44□□□□□ -0.74
CAPN3-213ENST00000565173 KIAA1683Q9H0B3 1180 aa10.44□□□□□ -0.74
CAPN3-213ENST00000565173 NR2E3Q9Y5X4 410 aa10.44□□□□□ -0.74
CAPN3-213ENST00000565173 MAGEB6P1A0A0J9YX57 407 aa10.43□□□□□ -0.74
CAPN3-213ENST00000565173 USP17L15C9J2P7 530 aa10.43□□□□□ -0.74
CAPN3-213ENST00000565173 USP17L13C9JLJ4 530 aa10.43□□□□□ -0.74
CAPN3-213ENST00000565173 USP17L11C9JVI0 530 aa10.43□□□□□ -0.74
CAPN3-213ENST00000565173 USP17L18D6R9N7 530 aa10.43□□□□□ -0.74
CAPN3-213ENST00000565173 USP17L22D6RA61 530 aa10.43□□□□□ -0.74
CAPN3-213ENST00000565173 USP17L17D6RBQ6 530 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms