RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 USP17L5A8MUK1 530 aa19.88■□□□□ 0.77
RNF40-206ENST00000564260 SGSM2O43147 1006 aa19.88■□□□□ 0.77
RNF40-206ENST00000564260 ALDH1A1P00352 501 aa19.88■□□□□ 0.77
RNF40-206ENST00000564260 SNAPC2Q13487 334 aa19.88■□□□□ 0.77
RNF40-206ENST00000564260 OTUD7BQ6GQQ9 843 aa19.88■□□□□ 0.77
RNF40-206ENST00000564260 CCDC129Q6ZRS4 1044 aa19.88■□□□□ 0.77
RNF40-206ENST00000564260 WDR18Q9BV38 432 aa19.88■□□□□ 0.77
RNF40-206ENST00000564260 SAGE1Q9NXZ1 904 aa19.88■□□□□ 0.77
RNF40-206ENST00000564260 FAM196BA6NMK8 535 aa19.87■□□□□ 0.77
RNF40-206ENST00000564260 FGAP02671 866 aa19.87■□□□□ 0.77
RNF40-206ENST00000564260 CETPP11597 493 aa19.87■□□□□ 0.77
RNF40-206ENST00000564260 CDK8P49336 464 aa19.87■□□□□ 0.77
RNF40-206ENST00000564260 KIF23Q02241 960 aaPredicted RBP19.87■□□□□ 0.77
RNF40-206ENST00000564260 PPARAQ07869 468 aa19.87■□□□□ 0.77
RNF40-206ENST00000564260 ABCB5Q2M3G0 1257 aa19.87■□□□□ 0.77
RNF40-206ENST00000564260 TMEM179Q6ZVK1 233 aa19.87■□□□□ 0.77
RNF40-206ENST00000564260 OTUD5Q96G74 571 aa19.87■□□□□ 0.77
RNF40-206ENST00000564260 BEGAINQ9BUH8 593 aa19.87■□□□□ 0.77
RNF40-206ENST00000564260 ZBTB21Q9ULJ3 1066 aa19.87■□□□□ 0.77
RNF40-206ENST00000564260 DOCK1Q14185 1865 aa19.86■□□□□ 0.77
RNF40-206ENST00000564260 MINDY4BA8MYZ0 360 aa19.86■□□□□ 0.77
RNF40-206ENST00000564260 AOC2O75106 756 aa19.86■□□□□ 0.77
RNF40-206ENST00000564260 CDC45O75419 566 aa19.86■□□□□ 0.77
RNF40-206ENST00000564260 GRM1Q13255 1194 aa19.86■□□□□ 0.77
RNF40-206ENST00000564260 PPP4R3BQ5MIZ7 849 aa19.86■□□□□ 0.77
RNF40-206ENST00000564260 VPS53Q5VIR6 699 aa19.86■□□□□ 0.77
RNF40-206ENST00000564260 MS4A4AQ96JQ5 239 aa19.86■□□□□ 0.77
RNF40-206ENST00000564260 WBP1LQ9NX94 342 aa19.86■□□□□ 0.77
RNF40-206ENST00000564260 AFG3L2Q9Y4W6 797 aa19.86■□□□□ 0.77
RNF40-206ENST00000564260 ZHX2Q9Y6X8 837 aa19.86■□□□□ 0.77
RNF40-206ENST00000564260 IRF6O14896 467 aa19.85■□□□□ 0.77
RNF40-206ENST00000564260 FGRP09769 529 aa19.85■□□□□ 0.77
RNF40-206ENST00000564260 CYP2D6P10635 497 aa19.85■□□□□ 0.77
RNF40-206ENST00000564260 GJA5P36382 358 aa19.85■□□□□ 0.77
RNF40-206ENST00000564260 FASTKD5Q7L8L6 764 aaKnown RBP19.85■□□□□ 0.77
RNF40-206ENST00000564260 ZNF280CQ8ND82 737 aa19.85■□□□□ 0.77
RNF40-206ENST00000564260 CFHR5Q9BXR6 569 aa19.85■□□□□ 0.77
RNF40-206ENST00000564260 MKNK2Q9HBH9 465 aa19.85■□□□□ 0.77
RNF40-206ENST00000564260 EIF5BO60841 1220 aaKnown RBP19.84■□□□□ 0.77
RNF40-206ENST00000564260 SLC4A8Q2Y0W8 1093 aa19.84■□□□□ 0.77
RNF40-206ENST00000564260 RNF41Q9H4P4 317 aaPredicted RBP19.84■□□□□ 0.77
RNF40-206ENST00000564260 A0A0G2JLL6 359 aaPredicted RBP19.83■□□□□ 0.77
RNF40-206ENST00000564260 C19orf81C9J6K1 198 aa19.83■□□□□ 0.77
RNF40-206ENST00000564260 GH2P01242 217 aa19.83■□□□□ 0.77
RNF40-206ENST00000564260 RRP1BQ14684 758 aaKnown RBP19.83■□□□□ 0.77
RNF40-206ENST00000564260 IMMTQ16891 758 aaKnown RBP19.83■□□□□ 0.77
RNF40-206ENST00000564260 SH3D19Q5HYK7 790 aa19.83■□□□□ 0.77
RNF40-206ENST00000564260 KIAA1211Q6ZU35 1233 aa19.83■□□□□ 0.77
RNF40-206ENST00000564260 PRRT2Q7Z6L0 340 aaPredicted RBP19.83■□□□□ 0.77
RNF40-206ENST00000564260 PROCA1Q8NCQ7 364 aaPredicted RBP19.83■□□□□ 0.77
RNF40-206ENST00000564260 DYNLL2Q96FJ2 89 aa19.83■□□□□ 0.77
RNF40-206ENST00000564260 SH2D4AQ9H788 454 aa19.83■□□□□ 0.77
RNF40-206ENST00000564260 SYNPO2Q9UMS6 1093 aa19.83■□□□□ 0.77
RNF40-206ENST00000564260 SLC45A1Q9Y2W3 748 aa19.83■□□□□ 0.77
RNF40-206ENST00000564260 PLIN4Q96Q06 1357 aa19.83■□□□□ 0.76
RNF40-206ENST00000564260 CYP2D7A0A087X1C5 515 aa19.82■□□□□ 0.76
RNF40-206ENST00000564260 ZNF213O14771 459 aa19.82■□□□□ 0.76
RNF40-206ENST00000564260 EPB41L2O43491 1005 aaKnown RBP19.82■□□□□ 0.76
RNF40-206ENST00000564260 ORC4O43929 436 aa19.82■□□□□ 0.76
RNF40-206ENST00000564260 GDF11O95390 407 aa19.82■□□□□ 0.76
RNF40-206ENST00000564260 SLURP2P0DP57 97 aa19.82■□□□□ 0.76
RNF40-206ENST00000564260 USP14P54578 494 aa19.82■□□□□ 0.76
RNF40-206ENST00000564260 NOM1Q5C9Z4 860 aaKnown RBP19.82■□□□□ 0.76
RNF40-206ENST00000564260 ZNF444Q8N0Y2 327 aaPredicted RBP19.82■□□□□ 0.76
RNF40-206ENST00000564260 ESYT1Q9BSJ8 1104 aa19.82■□□□□ 0.76
RNF40-206ENST00000564260 KANSL2Q9H9L4 492 aa19.82■□□□□ 0.76
RNF40-206ENST00000564260 U3KPZ7 1027 aaPredicted RBP19.82■□□□□ 0.76
RNF40-206ENST00000564260 BAZ2AQ9UIF9 1905 aaKnown RBP19.82■□□□□ 0.76
RNF40-206ENST00000564260 CCL15-CCL14A0A0B4J2E2 113 aa19.81■□□□□ 0.76
RNF40-206ENST00000564260 BACE1P56817 501 aa19.81■□□□□ 0.76
RNF40-206ENST00000564260 CCL15Q16663 113 aa19.81■□□□□ 0.76
RNF40-206ENST00000564260 IFNL1Q8IU54 200 aa19.81■□□□□ 0.76
RNF40-206ENST00000564260 SLC44A5Q8NCS7 719 aa19.81■□□□□ 0.76
RNF40-206ENST00000564260 STAG1Q8WVM7 1258 aa19.81■□□□□ 0.76
RNF40-206ENST00000564260 CNKSR2Q8WXI2 1034 aa19.81■□□□□ 0.76
RNF40-206ENST00000564260 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.81■□□□□ 0.76
RNF40-206ENST00000564260 PCNTO95613 3336 aa19.81■□□□□ 0.76
RNF40-206ENST00000564260 USP17L10C9JJH3 530 aa19.8■□□□□ 0.76
RNF40-206ENST00000564260 RASA1P20936 1047 aa19.8■□□□□ 0.76
RNF40-206ENST00000564260 PABPC4Q13310 644 aaKnown RBP eCLIP19.8■□□□□ 0.76
RNF40-206ENST00000564260 ANKRD23Q86SG2 305 aa19.8■□□□□ 0.76
RNF40-206ENST00000564260 SKAP1Q86WV1 359 aa19.8■□□□□ 0.76
RNF40-206ENST00000564260 MAP4K1Q92918 833 aa19.8■□□□□ 0.76
RNF40-206ENST00000564260 KIAA1683Q9H0B3 1180 aa19.8■□□□□ 0.76
RNF40-206ENST00000564260 SPP2Q13103 211 aa19.79■□□□□ 0.76
RNF40-206ENST00000564260 RAB3GAP1Q15042 981 aa19.79■□□□□ 0.76
RNF40-206ENST00000564260 AKNAD1Q5T1N1 836 aa19.79■□□□□ 0.76
RNF40-206ENST00000564260 BRI3BPQ8WY22 251 aa19.79■□□□□ 0.76
RNF40-206ENST00000564260 C12orf42Q96LP6 360 aa19.79■□□□□ 0.76
RNF40-206ENST00000564260 ZIC5Q96T25 663 aa19.79■□□□□ 0.76
RNF40-206ENST00000564260 IL25Q9H293 177 aa19.79■□□□□ 0.76
RNF40-206ENST00000564260 ARHGEF10LQ9HCE6 1279 aa19.79■□□□□ 0.76
RNF40-206ENST00000564260 MPHOSPH10O00566 681 aaKnown RBP19.78■□□□□ 0.76
RNF40-206ENST00000564260 AKR1B1P15121 316 aa19.78■□□□□ 0.76
RNF40-206ENST00000564260 EVX2Q03828 476 aa19.78■□□□□ 0.76
RNF40-206ENST00000564260 ICA1Q05084 483 aa19.78■□□□□ 0.76
RNF40-206ENST00000564260 MKRN3Q13064 507 aaKnown RBP19.78■□□□□ 0.76
RNF40-206ENST00000564260 MFSD6Q6ZSS7 791 aa19.78■□□□□ 0.76
RNF40-206ENST00000564260 NEDD1Q8NHV4 660 aa19.78■□□□□ 0.76
RNF40-206ENST00000564260 CNNM2Q9H8M5 875 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms