RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 TNKSO95271 1327 aa11.95□□□□□ -0.5
SMG1-208ENST00000563448 TSPY2A6NKD2 308 aa11.95□□□□□ -0.5
SMG1-208ENST00000563448 HSP90AA1P07900 732 aaKnown RBP11.95□□□□□ -0.5
SMG1-208ENST00000563448 SHMT1P34896 483 aa11.95□□□□□ -0.5
SMG1-208ENST00000563448 LIFRP42702 1097 aa11.95□□□□□ -0.5
SMG1-208ENST00000563448 NT5C2P49902 561 aa11.95□□□□□ -0.5
SMG1-208ENST00000563448 HIRAP54198 1017 aaPredicted RBP11.95□□□□□ -0.5
SMG1-208ENST00000563448 SGMS1Q86VZ5 419 aa11.95□□□□□ -0.5
SMG1-208ENST00000563448 CCDC83Q8IWF9 413 aa11.95□□□□□ -0.5
SMG1-208ENST00000563448 ZNF274Q96GC6 653 aaPredicted RBP11.95□□□□□ -0.5
SMG1-208ENST00000563448 HACL1Q9UJ83 578 aa11.95□□□□□ -0.5
SMG1-208ENST00000563448 SCAF8Q9UPN6 1271 aaKnown RBP11.95□□□□□ -0.5
SMG1-208ENST00000563448 ZC3H4Q9UPT8 1303 aaKnown RBP11.95□□□□□ -0.5
SMG1-208ENST00000563448 KLF18A0A0U1RQI7 1052 aa11.94□□□□□ -0.5
SMG1-208ENST00000563448 NMT2O60551 498 aa11.94□□□□□ -0.5
SMG1-208ENST00000563448 PFKFB2O60825 505 aa11.94□□□□□ -0.5
SMG1-208ENST00000563448 PDIA3P30101 505 aaKnown RBP11.94□□□□□ -0.5
SMG1-208ENST00000563448 WTAPQ15007 396 aa11.94□□□□□ -0.5
SMG1-208ENST00000563448 SART3Q15020 963 aaKnown RBP11.94□□□□□ -0.5
SMG1-208ENST00000563448 DPY19L2Q6NUT2 758 aa11.94□□□□□ -0.5
SMG1-208ENST00000563448 METTL16Q86W50 562 aaKnown RBP11.94□□□□□ -0.5
SMG1-208ENST00000563448 FOXP4Q8IVH2 680 aaPredicted RBP11.94□□□□□ -0.5
SMG1-208ENST00000563448 ENAHQ8N8S7 591 aaPredicted RBP11.94□□□□□ -0.5
SMG1-208ENST00000563448 UBAC1Q9BSL1 405 aa11.94□□□□□ -0.5
SMG1-208ENST00000563448 TMEM39BQ9GZU3 492 aa11.94□□□□□ -0.5
SMG1-208ENST00000563448 SLKQ9H2G2 1235 aaPredicted RBP11.94□□□□□ -0.5
SMG1-208ENST00000563448 IL17RBQ9NRM6 502 aa11.94□□□□□ -0.5
SMG1-208ENST00000563448 ERICH2A1L162 156 aa11.94□□□□□ -0.5
SMG1-208ENST00000563448 FAM196BA6NMK8 535 aa11.94□□□□□ -0.5
SMG1-208ENST00000563448 TSPY3P0CV98 308 aa11.94□□□□□ -0.5
SMG1-208ENST00000563448 TSPY8P0CW00 308 aa11.94□□□□□ -0.5
SMG1-208ENST00000563448 SCRN1Q12765 414 aa11.94□□□□□ -0.5
SMG1-208ENST00000563448 IQCA1Q86XH1 822 aa11.94□□□□□ -0.5
SMG1-208ENST00000563448 CDAN1Q8IWY9 1227 aa11.94□□□□□ -0.5
SMG1-208ENST00000563448 GTF3C6Q969F1 213 aa11.94□□□□□ -0.5
SMG1-208ENST00000563448 INTS4Q96HW7 963 aaKnown RBP11.94□□□□□ -0.5
SMG1-208ENST00000563448 CSRNP1Q96S65 589 aa11.94□□□□□ -0.5
SMG1-208ENST00000563448 TCP11L1Q9NUJ3 509 aa11.94□□□□□ -0.5
SMG1-208ENST00000563448 LMOD1P29536 600 aaPredicted RBP11.93□□□□□ -0.5
SMG1-208ENST00000563448 DDIT3P35638 169 aa11.93□□□□□ -0.5
SMG1-208ENST00000563448 TNNI2P48788 182 aa11.93□□□□□ -0.5
SMG1-208ENST00000563448 CRACR2BQ8N4Y2 399 aaPredicted RBP11.93□□□□□ -0.5
SMG1-208ENST00000563448 NEDD1Q8NHV4 660 aa11.93□□□□□ -0.5
SMG1-208ENST00000563448 L3MBTL3Q96JM7 780 aaPredicted RBP11.93□□□□□ -0.5
SMG1-208ENST00000563448 NAP1L2Q9ULW6 460 aaPredicted RBP11.93□□□□□ -0.5
SMG1-208ENST00000563448 HPS5Q9UPZ3 1129 aa11.93□□□□□ -0.5
SMG1-208ENST00000563448 PLIN4Q96Q06 1357 aa11.93□□□□□ -0.5
SMG1-208ENST00000563448 GLTPD2A6NH11 291 aa11.93□□□□□ -0.5
SMG1-208ENST00000563448 CCDC69A6NI79 296 aa11.93□□□□□ -0.5
SMG1-208ENST00000563448 AKR1B1P15121 316 aa11.93□□□□□ -0.5
SMG1-208ENST00000563448 CCT2P78371 535 aaKnown RBP11.93□□□□□ -0.5
SMG1-208ENST00000563448 RASA3Q14644 834 aa11.93□□□□□ -0.5
SMG1-208ENST00000563448 ANGEL2Q5VTE6 544 aaKnown RBP11.93□□□□□ -0.5
SMG1-208ENST00000563448 RCSD1Q6JBY9 416 aa11.93□□□□□ -0.5
SMG1-208ENST00000563448 TATDN1Q6P1N9 297 aa11.93□□□□□ -0.5
SMG1-208ENST00000563448 APOA5Q6Q788 366 aa11.93□□□□□ -0.5
SMG1-208ENST00000563448 NFXL1Q6ZNB6 911 aa11.93□□□□□ -0.5
SMG1-208ENST00000563448 RAB11FIP4Q86YS3 637 aa11.93□□□□□ -0.5
SMG1-208ENST00000563448 TMTC2Q8N394 836 aa11.93□□□□□ -0.5
SMG1-208ENST00000563448 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.93□□□□□ -0.5
SMG1-208ENST00000563448 ADARB2Q9NS39 739 aaKnown RBP11.93□□□□□ -0.5
SMG1-208ENST00000563448 TAOK2Q9UL54 1235 aa11.93□□□□□ -0.5
SMG1-208ENST00000563448 DOCK1Q14185 1865 aa11.92□□□□□ -0.5
SMG1-208ENST00000563448 DTNBO60941 627 aa11.92□□□□□ -0.5
SMG1-208ENST00000563448 TNFAIP1Q13829 316 aa11.92□□□□□ -0.5
SMG1-208ENST00000563448 IFIT1BQ5T764 474 aaKnown RBP11.92□□□□□ -0.5
SMG1-208ENST00000563448 ANKS1AQ92625 1134 aa11.92□□□□□ -0.5
SMG1-208ENST00000563448 TEPSINQ96N21 525 aa11.92□□□□□ -0.5
SMG1-208ENST00000563448 TRIM34Q9BYJ4 488 aa11.92□□□□□ -0.5
SMG1-208ENST00000563448 GOLGA8BA8MQT2 603 aa11.91□□□□□ -0.5
SMG1-208ENST00000563448 RXRAP19793 462 aa11.91□□□□□ -0.5
SMG1-208ENST00000563448 CCDC178Q5BJE1 867 aa11.91□□□□□ -0.5
SMG1-208ENST00000563448 DGKHQ86XP1 1220 aa11.91□□□□□ -0.5
SMG1-208ENST00000563448 MYL10Q9BUA6 226 aa11.91□□□□□ -0.5
SMG1-208ENST00000563448 NCOA5Q9HCD5 579 aaKnown RBP11.91□□□□□ -0.5
SMG1-208ENST00000563448 HERC5Q9UII4 1024 aaKnown RBP11.91□□□□□ -0.5
SMG1-208ENST00000563448 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.91□□□□□ -0.5
SMG1-208ENST00000563448 NID2Q14112 1375 aa11.91□□□□□ -0.5
SMG1-208ENST00000563448 IGKV6D-41A0A0C4DH26 115 aa11.91□□□□□ -0.5
SMG1-208ENST00000563448 TBC1D12O60347 775 aa11.91□□□□□ -0.5
SMG1-208ENST00000563448 CTDNEP1O95476 244 aa11.91□□□□□ -0.5
SMG1-208ENST00000563448 RRP1BQ14684 758 aaKnown RBP11.91□□□□□ -0.5
SMG1-208ENST00000563448 CERKLQ49MI3 558 aaPredicted RBP11.91□□□□□ -0.5
SMG1-208ENST00000563448 APOBEC3FQ8IUX4 373 aaKnown RBP11.91□□□□□ -0.5
SMG1-208ENST00000563448 ZNF654Q8IZM8 581 aa11.91□□□□□ -0.5
SMG1-208ENST00000563448 CCDC17Q96LX7 622 aa11.91□□□□□ -0.5
SMG1-208ENST00000563448 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.91□□□□□ -0.5
SMG1-208ENST00000563448 GGA3Q9NZ52 723 aa11.91□□□□□ -0.5
SMG1-208ENST00000563448 SLC12A7Q9Y666 1083 aa11.91□□□□□ -0.5
SMG1-208ENST00000563448 POTECB2RU33 542 aa11.9□□□□□ -0.5
SMG1-208ENST00000563448 ZBTB43O43298 467 aa11.9□□□□□ -0.5
SMG1-208ENST00000563448 NOVP48745 357 aa11.9□□□□□ -0.5
SMG1-208ENST00000563448 MAP3K10Q02779 954 aa11.9□□□□□ -0.5
SMG1-208ENST00000563448 SHROOM1Q2M3G4 852 aaPredicted RBP11.9□□□□□ -0.5
SMG1-208ENST00000563448 CEP95Q96GE4 821 aa11.9□□□□□ -0.5
SMG1-208ENST00000563448 DEFB129Q9H1M3 183 aa11.9□□□□□ -0.5
SMG1-208ENST00000563448 CWC22Q9HCG8 908 aaKnown RBP11.9□□□□□ -0.5
SMG1-208ENST00000563448 BAZ2BQ9UIF8 2168 aaKnown RBP11.9□□□□□ -0.5
SMG1-208ENST00000563448 PHIPQ8WWQ0 1821 aa11.9□□□□□ -0.5
SMG1-208ENST00000563448 TCHHQ07283 1943 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms