RNA–Protein interactions for RNA: ENST00000563240.1

LPCAT4-204, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 939 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-204ENST00000563240 CRNKL1Q9BZJ0 848 aaKnown RBP18.47■□□□□ 0.55
LPCAT4-204ENST00000563240 ARMT1Q9H993 441 aa18.47■□□□□ 0.55
LPCAT4-204ENST00000563240 TMOD4Q9NZQ9 345 aa18.47■□□□□ 0.55
LPCAT4-204ENST00000563240 TCRBV5S4A2TA0A5A2 114 aa18.46■□□□□ 0.55
LPCAT4-204ENST00000563240 GH2P01242 217 aa18.46■□□□□ 0.55
LPCAT4-204ENST00000563240 PRMT2P55345 433 aa18.46■□□□□ 0.55
LPCAT4-204ENST00000563240 BACE1P56817 501 aa18.46■□□□□ 0.55
LPCAT4-204ENST00000563240 PRKCZQ05513 592 aa18.46■□□□□ 0.55
LPCAT4-204ENST00000563240 TMED8Q6PL24 325 aaPredicted RBP18.46■□□□□ 0.55
LPCAT4-204ENST00000563240 DCTPP1Q9H773 170 aa18.46■□□□□ 0.55
LPCAT4-204ENST00000563240 PNMA3Q9UL41 463 aa18.46■□□□□ 0.55
LPCAT4-204ENST00000563240 PHIPQ8WWQ0 1821 aa18.46■□□□□ 0.55
LPCAT4-204ENST00000563240 SIPA1L1O43166 1804 aa18.45■□□□□ 0.54
LPCAT4-204ENST00000563240 EVX2Q03828 476 aa18.45■□□□□ 0.54
LPCAT4-204ENST00000563240 PABPC4Q13310 644 aaKnown RBP eCLIP18.45■□□□□ 0.54
LPCAT4-204ENST00000563240 SH3D19Q5HYK7 790 aa18.45■□□□□ 0.54
LPCAT4-204ENST00000563240 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.45■□□□□ 0.548e-7■■■■■ 54.2
LPCAT4-204ENST00000563240 ASCC2Q9H1I8 757 aaPredicted RBP18.45■□□□□ 0.54
LPCAT4-204ENST00000563240 MCM9Q9NXL9 1143 aa18.45■□□□□ 0.54
LPCAT4-204ENST00000563240 BIN2Q9UBW5 565 aaPredicted RBP18.45■□□□□ 0.54
LPCAT4-204ENST00000563240 GABRQQ9UN88 632 aa18.45■□□□□ 0.54
LPCAT4-204ENST00000563240 PCDHB15Q9Y5E8 787 aa18.45■□□□□ 0.54
LPCAT4-204ENST00000563240 USP17L10C9JJH3 530 aa18.44■□□□□ 0.54
LPCAT4-204ENST00000563240 TNPO2O14787 897 aaKnown RBP18.44■□□□□ 0.54
LPCAT4-204ENST00000563240 PRKAB2O43741 272 aa18.44■□□□□ 0.54
LPCAT4-204ENST00000563240 MBD4O95243 580 aa18.44■□□□□ 0.54
LPCAT4-204ENST00000563240 ADD2P35612 726 aa18.44■□□□□ 0.54
LPCAT4-204ENST00000563240 RRP1P56182 461 aaKnown RBP18.44■□□□□ 0.54
LPCAT4-204ENST00000563240 RAB3GAP1Q15042 981 aa18.44■□□□□ 0.54
LPCAT4-204ENST00000563240 CERKLQ49MI3 558 aaPredicted RBP18.44■□□□□ 0.54
LPCAT4-204ENST00000563240 TSHZ3Q63HK5 1081 aa18.44■□□□□ 0.54
LPCAT4-204ENST00000563240 TATDN1Q6P1N9 297 aa18.44■□□□□ 0.54
LPCAT4-204ENST00000563240 EHD4Q9H223 541 aa18.44■□□□□ 0.54
LPCAT4-204ENST00000563240 ECHDC1Q9NTX5 307 aa18.44■□□□□ 0.54
LPCAT4-204ENST00000563240 TAOK2Q9UL54 1235 aa18.44■□□□□ 0.54
LPCAT4-204ENST00000563240 CDK5RAP2Q96SN8 1893 aa18.43■□□□□ 0.54
LPCAT4-204ENST00000563240 CYP2D6P10635 497 aa18.43■□□□□ 0.54
LPCAT4-204ENST00000563240 GRK4P32298 578 aa18.43■□□□□ 0.54
LPCAT4-204ENST00000563240 MTFR1Q15390 333 aa18.43■□□□□ 0.54
LPCAT4-204ENST00000563240 ZYXQ15942 572 aaKnown RBP18.43■□□□□ 0.54
LPCAT4-204ENST00000563240 ABCB5Q2M3G0 1257 aa18.43■□□□□ 0.54
LPCAT4-204ENST00000563240 DCP1AQ9NPI6 582 aaPredicted RBP18.43■□□□□ 0.54
LPCAT4-204ENST00000563240 GINM1Q9NU53 330 aa18.43■□□□□ 0.54
LPCAT4-204ENST00000563240 C19orf81C9J6K1 198 aa18.42■□□□□ 0.54
LPCAT4-204ENST00000563240 PEX10O60683 326 aa18.42■□□□□ 0.54
LPCAT4-204ENST00000563240 SHMT1P34896 483 aa18.42■□□□□ 0.54
LPCAT4-204ENST00000563240 FLT3LGP49771 235 aa18.42■□□□□ 0.54
LPCAT4-204ENST00000563240 IRX3P78415 501 aaPredicted RBP18.42■□□□□ 0.54
LPCAT4-204ENST00000563240 P2RX7Q99572 595 aaKnown RBP18.42■□□□□ 0.54
LPCAT4-204ENST00000563240 FEZ1Q99689 392 aa18.42■□□□□ 0.54
LPCAT4-204ENST00000563240 HTTP42858 3142 aa18.42■□□□□ 0.54
LPCAT4-204ENST00000563240 ATAD5Q96QE3 1844 aa18.42■□□□□ 0.54
LPCAT4-204ENST00000563240 PTPRFP10586 1907 aa18.41■□□□□ 0.54
LPCAT4-204ENST00000563240 MPHOSPH10O00566 681 aaKnown RBP18.41■□□□□ 0.54
LPCAT4-204ENST00000563240 GCLCP48506 637 aaPredicted RBP18.41■□□□□ 0.54
LPCAT4-204ENST00000563240 FAM110CQ1W6H9 321 aa18.41■□□□□ 0.54
LPCAT4-204ENST00000563240 USP17L2Q6R6M4 530 aa18.41■□□□□ 0.54
LPCAT4-204ENST00000563240 DYNLL2Q96FJ2 89 aa18.41■□□□□ 0.54
LPCAT4-204ENST00000563240 CABP5Q9NP86 173 aa18.41■□□□□ 0.54
LPCAT4-204ENST00000563240 EMILIN3Q9NT22 766 aa18.41■□□□□ 0.54
LPCAT4-204ENST00000563240 FOCADQ5VW36 1801 aa18.41■□□□□ 0.54
LPCAT4-204ENST00000563240 ELNP15502 786 aa18.4■□□□□ 0.54
LPCAT4-204ENST00000563240 SLC44A5Q8NCS7 719 aa18.4■□□□□ 0.54
LPCAT4-204ENST00000563240 ACER1Q8TDN7 264 aa18.4■□□□□ 0.54
LPCAT4-204ENST00000563240 COA7Q96BR5 231 aa18.4■□□□□ 0.54
LPCAT4-204ENST00000563240 CRBNQ96SW2 442 aa18.4■□□□□ 0.54
LPCAT4-204ENST00000563240 MYH1P12882 1939 aa18.4■□□□□ 0.54
LPCAT4-204ENST00000563240 CYP2D7A0A087X1C5 515 aa18.39■□□□□ 0.53
LPCAT4-204ENST00000563240 ADCY3O60266 1144 aa18.39■□□□□ 0.53
LPCAT4-204ENST00000563240 HOXA7P31268 230 aaPredicted RBP18.39■□□□□ 0.53
LPCAT4-204ENST00000563240 UBE3CQ15386 1083 aa18.39■□□□□ 0.53
LPCAT4-204ENST00000563240 GPATCH3Q96I76 525 aa18.39■□□□□ 0.53
LPCAT4-204ENST00000563240 PUS7LQ9H0K6 701 aaKnown RBP18.39■□□□□ 0.53
LPCAT4-204ENST00000563240 SLC4A4Q9Y6R1 1079 aa18.39■□□□□ 0.53
LPCAT4-204ENST00000563240 SMIM22K7EJ46 135 aa18.38■□□□□ 0.53
LPCAT4-204ENST00000563240 HERVK_113P62684 666 aa18.38■□□□□ 0.53
LPCAT4-204ENST00000563240 GABPAQ06546 454 aa18.38■□□□□ 0.53
LPCAT4-204ENST00000563240 SEPT2Q15019 361 aa18.38■□□□□ 0.53
LPCAT4-204ENST00000563240 ZSCAN25Q6NSZ9 544 aa18.38■□□□□ 0.53
LPCAT4-204ENST00000563240 KIAA0100Q14667 2235 aaKnown RBP18.38■□□□□ 0.53
LPCAT4-204ENST00000563240 USP17L12C9JPN9 530 aa18.37■□□□□ 0.53
LPCAT4-204ENST00000563240 USP17L21D6R901 530 aa18.37■□□□□ 0.53
LPCAT4-204ENST00000563240 CCL5P13501 91 aa18.37■□□□□ 0.53
LPCAT4-204ENST00000563240 GUCY1A2P33402 732 aa18.37■□□□□ 0.53
LPCAT4-204ENST00000563240 UBXN2AP68543 259 aa18.37■□□□□ 0.53
LPCAT4-204ENST00000563240 SLAIN1Q8ND83 568 aa18.37■□□□□ 0.53
LPCAT4-204ENST00000563240 OTUD7AQ8TE49 926 aaPredicted RBP18.37■□□□□ 0.53
LPCAT4-204ENST00000563240 PAGR1Q9BTK6 254 aa18.37■□□□□ 0.53
LPCAT4-204ENST00000563240 RNF208Q9H0X6 261 aa18.37■□□□□ 0.53
LPCAT4-204ENST00000563240 TXNRD2Q9NNW7 524 aa18.37■□□□□ 0.53
LPCAT4-204ENST00000563240 ATP8A2Q9NTI2 1148 aa18.37■□□□□ 0.53
LPCAT4-204ENST00000563240 LOC285556D6RIA3 1793 aa18.36■□□□□ 0.53
LPCAT4-204ENST00000563240 GPRC5AQ8NFJ5 357 aa18.36■□□□□ 0.53
LPCAT4-204ENST00000563240 DDRGK1Q96HY6 314 aa18.36■□□□□ 0.53
LPCAT4-204ENST00000563240 RBPJLQ9UBG7 517 aa18.36■□□□□ 0.53
LPCAT4-204ENST00000563240 INHAP05111 366 aa18.35■□□□□ 0.53
LPCAT4-204ENST00000563240 USP14P54578 494 aa18.35■□□□□ 0.53
LPCAT4-204ENST00000563240 Q3C1V9 767 aa18.35■□□□□ 0.53
LPCAT4-204ENST00000563240 C12orf60Q5U649 245 aa18.35■□□□□ 0.53
LPCAT4-204ENST00000563240 PRPF38BQ5VTL8 546 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms