RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 PRAM1Q96QH2 718 aa8.12□□□□□ -1.11
UBR1-203ENST00000562173 POP1Q99575 1024 aaKnown RBP8.12□□□□□ -1.11
UBR1-203ENST00000562173 ABCB6Q9NP58 842 aa8.12□□□□□ -1.11
UBR1-203ENST00000562173 SOX13Q9UN79 622 aa8.12□□□□□ -1.11
UBR1-203ENST00000562173 SHANK3Q9BYB0 1731 aa8.12□□□□□ -1.11
UBR1-203ENST00000562173 PARP4Q9UKK3 1724 aaKnown RBP8.12□□□□□ -1.11
UBR1-203ENST00000562173 KAT6BQ8WYB5 2073 aa8.11□□□□□ -1.11
UBR1-203ENST00000562173 CABP4P57796 275 aa8.11□□□□□ -1.11
UBR1-203ENST00000562173 GDF6Q6KF10 455 aaPredicted RBP8.11□□□□□ -1.11
UBR1-203ENST00000562173 DUSP9Q99956 384 aaKnown RBP8.11□□□□□ -1.11
UBR1-203ENST00000562173 C12orf49Q9H741 205 aa8.11□□□□□ -1.11
UBR1-203ENST00000562173 PPP4R2Q9NY27 417 aa8.11□□□□□ -1.11
UBR1-203ENST00000562173 WWC3Q9ULE0 1092 aa8.11□□□□□ -1.11
UBR1-203ENST00000562173 ARHGEF28Q8N1W1 1705 aaKnown RBP8.11□□□□□ -1.11
UBR1-203ENST00000562173 SBNO1A3KN83 1393 aa8.1□□□□□ -1.11
UBR1-203ENST00000562173 ABCC11Q96J66 1382 aa8.1□□□□□ -1.11
UBR1-203ENST00000562173 AKAP12Q02952 1782 aa8.1□□□□□ -1.11
UBR1-203ENST00000562173 H3BRJ5 948 aa8.1□□□□□ -1.11
UBR1-203ENST00000562173 KCNQ2O43526 872 aa8.1□□□□□ -1.11
UBR1-203ENST00000562173 GSTT1P30711 240 aa8.1□□□□□ -1.11
UBR1-203ENST00000562173 RAC1P63000 192 aa8.1□□□□□ -1.11
UBR1-203ENST00000562173 RPS26P11Q5JNZ5 115 aaPredicted RBP8.1□□□□□ -1.11
UBR1-203ENST00000562173 C8orf86Q6ZUL3 223 aa8.1□□□□□ -1.11
UBR1-203ENST00000562173 TMC4Q7Z404 712 aa8.1□□□□□ -1.11
UBR1-203ENST00000562173 GLIS3Q8NEA6 775 aa8.1□□□□□ -1.11
UBR1-203ENST00000562173 ANKRD24Q8TF21 1146 aa8.1□□□□□ -1.11
UBR1-203ENST00000562173 HHIPQ96QV1 700 aa8.1□□□□□ -1.11
UBR1-203ENST00000562173 SETDB2Q96T68 719 aa8.1□□□□□ -1.11
UBR1-203ENST00000562173 BCO2Q9BYV7 579 aa8.1□□□□□ -1.11
UBR1-203ENST00000562173 FAM8A1Q9UBU6 413 aa8.1□□□□□ -1.11
UBR1-203ENST00000562173 PPP1R1BQ9UD71 204 aaPredicted RBP8.1□□□□□ -1.11
UBR1-203ENST00000562173 PPM1HQ9ULR3 514 aa8.1□□□□□ -1.11
UBR1-203ENST00000562173 TOPAZ1Q8N9V7 1692 aa8.09□□□□□ -1.11
UBR1-203ENST00000562173 DAB2P98082 770 aa8.09□□□□□ -1.11
UBR1-203ENST00000562173 FAM117BQ6P1L5 589 aa8.09□□□□□ -1.11
UBR1-203ENST00000562173 PI16Q6UXB8 463 aa8.09□□□□□ -1.11
UBR1-203ENST00000562173 IL22RA1Q8N6P7 574 aa8.09□□□□□ -1.11
UBR1-203ENST00000562173 PPME1Q9Y570 386 aa8.09□□□□□ -1.11
UBR1-203ENST00000562173 ADGRB1O14514 1584 aa8.09□□□□□ -1.11
UBR1-203ENST00000562173 COL18A1P39060 1754 aa8.08□□□□□ -1.12
UBR1-203ENST00000562173 A0A096LPE4 126 aa8.08□□□□□ -1.12
UBR1-203ENST00000562173 TMEM238LA0A1B0GVL6 79 aa8.08□□□□□ -1.12
UBR1-203ENST00000562173 A0A1W2PPZ6 126 aa8.08□□□□□ -1.12
UBR1-203ENST00000562173 ZNF16P17020 682 aaPredicted RBP8.08□□□□□ -1.12
UBR1-203ENST00000562173 EIF4BP23588 611 aaKnown RBP8.08□□□□□ -1.12
UBR1-203ENST00000562173 PRRT3Q5FWE3 981 aa8.08□□□□□ -1.12
UBR1-203ENST00000562173 CD163Q86VB7 1156 aa8.08□□□□□ -1.12
UBR1-203ENST00000562173 ASAP3Q8TDY4 903 aa8.08□□□□□ -1.12
UBR1-203ENST00000562173 PLVAPQ9BX97 442 aa8.08□□□□□ -1.12
UBR1-203ENST00000562173 LACRTQ9GZZ8 138 aa8.08□□□□□ -1.12
UBR1-203ENST00000562173 CLEC4MQ9H2X3 399 aaPredicted RBP8.08□□□□□ -1.12
UBR1-203ENST00000562173 SOX17Q9H6I2 414 aaPredicted RBP8.08□□□□□ -1.12
UBR1-203ENST00000562173 PRDM11Q9NQV5 511 aa8.08□□□□□ -1.12
UBR1-203ENST00000562173 PARP2Q9UGN5 583 aa8.08□□□□□ -1.12
UBR1-203ENST00000562173 SSH2Q76I76 1423 aa8.08□□□□□ -1.12
UBR1-203ENST00000562173 CEP350Q5VT06 3117 aa8.07□□□□□ -1.12
UBR1-203ENST00000562173 C1QTNF9BB2RNN3 333 aa8.07□□□□□ -1.12
UBR1-203ENST00000562173 TRPA1O75762 1119 aa8.07□□□□□ -1.12
UBR1-203ENST00000562173 SPATA31C1P0DKV0 1188 aa8.07□□□□□ -1.12
UBR1-203ENST00000562173 EPHA1P21709 976 aa8.07□□□□□ -1.12
UBR1-203ENST00000562173 CHRNA4P43681 627 aa8.07□□□□□ -1.12
UBR1-203ENST00000562173 GRIA4P48058 902 aa8.07□□□□□ -1.12
UBR1-203ENST00000562173 PSMD2Q13200 908 aa8.07□□□□□ -1.12
UBR1-203ENST00000562173 ZNF576Q9H609 170 aa8.07□□□□□ -1.12
UBR1-203ENST00000562173 SPON1Q9HCB6 807 aa8.07□□□□□ -1.12
UBR1-203ENST00000562173 AK5Q9Y6K8 562 aa8.07□□□□□ -1.12
UBR1-203ENST00000562173 ARHGEF10O15013 1369 aa8.07□□□□□ -1.12
UBR1-203ENST00000562173 ATP7BP35670 1465 aa8.06□□□□□ -1.12
UBR1-203ENST00000562173 ELNP15502 786 aa8.06□□□□□ -1.12
UBR1-203ENST00000562173 C1QTNF8P60827 252 aa8.06□□□□□ -1.12
UBR1-203ENST00000562173 TRAPPC3LQ5T215 181 aa8.06□□□□□ -1.12
UBR1-203ENST00000562173 NXPE4Q6UWF7 544 aa8.06□□□□□ -1.12
UBR1-203ENST00000562173 VN1R5Q7Z5H4 357 aa8.06□□□□□ -1.12
UBR1-203ENST00000562173 FMR1NBQ8N0W7 255 aaPredicted RBP8.06□□□□□ -1.12
UBR1-203ENST00000562173 C3orf58Q8NDZ4 430 aa8.06□□□□□ -1.12
UBR1-203ENST00000562173 CRELD1Q96HD1 420 aa8.06□□□□□ -1.12
UBR1-203ENST00000562173 OSBPL7Q9BZF2 842 aa8.06□□□□□ -1.12
UBR1-203ENST00000562173 MRS2Q9HD23 443 aa8.06□□□□□ -1.12
UBR1-203ENST00000562173 OSGEPQ9NPF4 335 aa8.06□□□□□ -1.12
UBR1-203ENST00000562173 TULP4Q9NRJ4 1543 aa8.06□□□□□ -1.12
UBR1-203ENST00000562173 RGPD3A6NKT7 1758 aaPredicted RBP8.06□□□□□ -1.12
UBR1-203ENST00000562173 RGPD4Q7Z3J3 1758 aa8.06□□□□□ -1.12
UBR1-203ENST00000562173 ITSN1Q15811 1721 aa8.06□□□□□ -1.12
UBR1-203ENST00000562173 GOLGB1Q14789 3259 aaKnown RBP8.05□□□□□ -1.12
UBR1-203ENST00000562173 PAPPAQ13219 1627 aa8.05□□□□□ -1.12
UBR1-203ENST00000562173 A0A0A0MRY4 1105 aa8.05□□□□□ -1.12
UBR1-203ENST00000562173 ADAM23O75077 832 aa8.05□□□□□ -1.12
UBR1-203ENST00000562173 B3GALT4O96024 378 aa8.05□□□□□ -1.12
UBR1-203ENST00000562173 ADAMTSL4Q6UY14 1074 aa8.05□□□□□ -1.12
UBR1-203ENST00000562173 DTHD1Q6ZMT9 781 aa8.05□□□□□ -1.12
UBR1-203ENST00000562173 FAM196AQ6ZSG2 479 aa8.05□□□□□ -1.12
UBR1-203ENST00000562173 KLHL23Q8NBE8 558 aa8.05□□□□□ -1.12
UBR1-203ENST00000562173 NINLQ9Y2I6 1382 aa8.05□□□□□ -1.12
UBR1-203ENST00000562173 BTAF1O14981 1849 aa8.05□□□□□ -1.12
UBR1-203ENST00000562173 RPGRIP1LQ68CZ1 1315 aa8.04□□□□□ -1.12
UBR1-203ENST00000562173 METTL12A8MUP2 240 aa8.04□□□□□ -1.12
UBR1-203ENST00000562173 SORBS3O60504 671 aa8.04□□□□□ -1.12
UBR1-203ENST00000562173 VAMP1P23763 118 aa8.04□□□□□ -1.12
UBR1-203ENST00000562173 PCDH1Q08174 1060 aa8.04□□□□□ -1.12
UBR1-203ENST00000562173 TRIM28Q13263 835 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms