RNA–Protein interactions for RNA: ENST00000561662.1

COMMD4-204, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-204ENST00000561662 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.53■■□□□ 1.2
COMMD4-204ENST00000561662 ZBED9Q6R2W3 1325 aa22.53■■□□□ 1.2
COMMD4-204ENST00000561662 GDF11O95390 407 aa22.52■■□□□ 1.2
COMMD4-204ENST00000561662 MAPK4P31152 587 aa22.52■■□□□ 1.2
COMMD4-204ENST00000561662 RGS2P41220 211 aa22.52■■□□□ 1.2
COMMD4-204ENST00000561662 ERVK-9P63128 1117 aa22.52■■□□□ 1.2
COMMD4-204ENST00000561662 ERVK-24P63145 666 aa22.52■■□□□ 1.2
COMMD4-204ENST00000561662 TFCP2Q12800 502 aa22.52■■□□□ 1.2
COMMD4-204ENST00000561662 ZNF697Q5TEC3 545 aa22.52■■□□□ 1.2
COMMD4-204ENST00000561662 FAM109BQ6ICB4 259 aaPredicted RBP22.52■■□□□ 1.2
COMMD4-204ENST00000561662 POTEEQ6S8J3 1075 aa22.52■■□□□ 1.2
COMMD4-204ENST00000561662 SH3RF3Q8TEJ3 882 aaPredicted RBP22.52■■□□□ 1.2
COMMD4-204ENST00000561662 NSUN4Q96CB9 384 aaKnown RBP22.52■■□□□ 1.2
COMMD4-204ENST00000561662 HMG20BQ9P0W2 317 aa22.52■■□□□ 1.2
COMMD4-204ENST00000561662 NPM3O75607 178 aaKnown RBP22.51■■□□□ 1.19
COMMD4-204ENST00000561662 HOXA7P31268 230 aaPredicted RBP22.51■■□□□ 1.19
COMMD4-204ENST00000561662 MORN1Q5T089 497 aa22.51■■□□□ 1.19
COMMD4-204ENST00000561662 PLEKHH3Q7Z736 793 aa22.51■■□□□ 1.19
COMMD4-204ENST00000561662 NEUROD6Q96NK8 337 aa22.51■■□□□ 1.19
COMMD4-204ENST00000561662 CDX2Q99626 313 aaPredicted RBP22.51■■□□□ 1.19
COMMD4-204ENST00000561662 WDR18Q9BV38 432 aa22.51■■□□□ 1.19
COMMD4-204ENST00000561662 CWC22Q9HCG8 908 aaKnown RBP22.51■■□□□ 1.19
COMMD4-204ENST00000561662 PDS5AQ29RF7 1337 aaKnown RBP22.51■■□□□ 1.19
COMMD4-204ENST00000561662 COL2A1P02458 1487 aaPredicted RBP22.5■■□□□ 1.19
COMMD4-204ENST00000561662 TRMT44Q8IYL2 757 aaKnown RBP22.5■■□□□ 1.19
COMMD4-204ENST00000561662 APBA2Q99767 749 aa22.5■■□□□ 1.19
COMMD4-204ENST00000561662 FLRT1Q9NZU1 646 aa22.5■■□□□ 1.19
COMMD4-204ENST00000561662 LDHCP07864 332 aa22.49■■□□□ 1.19
COMMD4-204ENST00000561662 CNGA1P29973 690 aa22.49■■□□□ 1.19
COMMD4-204ENST00000561662 GSTO1P78417 241 aa22.49■■□□□ 1.19
COMMD4-204ENST00000561662 MVPQ14764 893 aaKnown RBP22.49■■□□□ 1.19
COMMD4-204ENST00000561662 WDR78Q5VTH9 848 aa22.49■■□□□ 1.19
COMMD4-204ENST00000561662 MAFAQ8NHW3 353 aaPredicted RBP22.49■■□□□ 1.19
COMMD4-204ENST00000561662 DNAJC18Q9H819 358 aa22.49■■□□□ 1.19
COMMD4-204ENST00000561662 COPRSQ9NQ92 184 aa22.49■■□□□ 1.19
COMMD4-204ENST00000561662 HERC5Q9UII4 1024 aaKnown RBP22.49■■□□□ 1.19
COMMD4-204ENST00000561662 MAPKAPK5Q8IW41 473 aa22.48■■□□□ 1.19
COMMD4-204ENST00000561662 SPATA5Q8NB90 893 aa22.48■■□□□ 1.19
COMMD4-204ENST00000561662 SMC4Q9NTJ3 1288 aa22.48■■□□□ 1.19
COMMD4-204ENST00000561662 SIPA1L1O43166 1804 aa22.47■■□□□ 1.19
COMMD4-204ENST00000561662 USP17L10C9JJH3 530 aa22.47■■□□□ 1.19
COMMD4-204ENST00000561662 ASNSP08243 561 aa22.47■■□□□ 1.19
COMMD4-204ENST00000561662 RTP1P59025 263 aa22.47■■□□□ 1.19
COMMD4-204ENST00000561662 ZYXQ15942 572 aaKnown RBP22.47■■□□□ 1.19
COMMD4-204ENST00000561662 MYLIPQ8WY64 445 aa22.47■■□□□ 1.19
COMMD4-204ENST00000561662 AATFQ9NY61 560 aaKnown RBP eCLIP22.47■■□□□ 1.19
COMMD4-204ENST00000561662 PI4KBQ9UBF8 816 aa22.47■■□□□ 1.19
COMMD4-204ENST00000561662 PRKAG2Q9UGJ0 569 aa22.47■■□□□ 1.19
COMMD4-204ENST00000561662 ZBTB22O15209 634 aa22.46■■□□□ 1.19
COMMD4-204ENST00000561662 SHHQ15465 462 aa22.46■■□□□ 1.19
COMMD4-204ENST00000561662 C9orf50Q5SZB4 431 aa22.46■■□□□ 1.19
COMMD4-204ENST00000561662 GORABQ5T7V8 394 aa22.46■■□□□ 1.19
COMMD4-204ENST00000561662 CRACR2BQ8N4Y2 399 aaPredicted RBP22.46■■□□□ 1.19
COMMD4-204ENST00000561662 TGFBRAP1Q8WUH2 860 aa22.46■■□□□ 1.19
COMMD4-204ENST00000561662 MEIS3Q99687 375 aa22.46■■□□□ 1.19
COMMD4-204ENST00000561662 EMILIN3Q9NT22 766 aa22.46■■□□□ 1.19
COMMD4-204ENST00000561662 ATP11BQ9Y2G3 1177 aa22.46■■□□□ 1.19
COMMD4-204ENST00000561662 MAST2Q6P0Q8 1798 aa22.45■■□□□ 1.19
COMMD4-204ENST00000561662 FRMPD3Q5JV73 1810 aa22.45■■□□□ 1.19
COMMD4-204ENST00000561662 MAP2K5Q13163 448 aa22.45■■□□□ 1.18
COMMD4-204ENST00000561662 MFSD14CQ5VZR4 134 aa22.45■■□□□ 1.18
COMMD4-204ENST00000561662 EDC3Q96F86 508 aaKnown RBP22.45■■□□□ 1.18
COMMD4-204ENST00000561662 TRIM34Q9BYJ4 488 aa22.45■■□□□ 1.18
COMMD4-204ENST00000561662 SEMA6BQ9H3T3 888 aa22.45■■□□□ 1.18
COMMD4-204ENST00000561662 PRDM5Q9NQX1 630 aaPredicted RBP22.45■■□□□ 1.18
COMMD4-204ENST00000561662 LRP2BPQ9P2M1 347 aa22.45■■□□□ 1.18
COMMD4-204ENST00000561662 SAP30BPQ9UHR5 308 aaKnown RBP22.45■■□□□ 1.18
COMMD4-204ENST00000561662 PALD1Q9ULE6 856 aa22.45■■□□□ 1.18
COMMD4-204ENST00000561662 ZBTB21Q9ULJ3 1066 aa22.45■■□□□ 1.18
COMMD4-204ENST00000561662 AKAP2Q9Y2D5 859 aa22.45■■□□□ 1.18
COMMD4-204ENST00000561662 C19orf81C9J6K1 198 aa22.44■■□□□ 1.18
COMMD4-204ENST00000561662 CNMDO75829 334 aa22.44■■□□□ 1.18
COMMD4-204ENST00000561662 CYP2C19P33261 490 aa22.44■■□□□ 1.18
COMMD4-204ENST00000561662 PRDM6Q9NQX0 595 aa22.44■■□□□ 1.18
COMMD4-204ENST00000561662 DDX20Q9UHI6 824 aaKnown RBP22.44■■□□□ 1.18
COMMD4-204ENST00000561662 MAP4K4O95819 1239 aaPredicted RBP22.43■■□□□ 1.18
COMMD4-204ENST00000561662 MYCNP04198 464 aaPredicted RBP22.43■■□□□ 1.18
COMMD4-204ENST00000561662 MCAMP43121 646 aa22.43■■□□□ 1.18
COMMD4-204ENST00000561662 GJC2Q5T442 439 aaPredicted RBP22.43■■□□□ 1.18
COMMD4-204ENST00000561662 ANO1Q5XXA6 986 aa22.43■■□□□ 1.18
COMMD4-204ENST00000561662 NOL10Q9BSC4 688 aaKnown RBP22.43■■□□□ 1.18
COMMD4-204ENST00000561662 DHX36Q9H2U1 1008 aaKnown RBP22.43■■□□□ 1.18
COMMD4-204ENST00000561662 SNRKQ9NRH2 765 aa22.43■■□□□ 1.18
COMMD4-204ENST00000561662 FLT1P17948 1338 aa22.42■■□□□ 1.18
COMMD4-204ENST00000561662 SRGAP3O43295 1099 aa22.42■■□□□ 1.18
COMMD4-204ENST00000561662 TRPV1Q8NER1 839 aa22.42■■□□□ 1.18
COMMD4-204ENST00000561662 NPLOC4Q8TAT6 608 aa22.42■■□□□ 1.18
COMMD4-204ENST00000561662 TTYH1Q9H313 450 aaPredicted RBP22.42■■□□□ 1.18
COMMD4-204ENST00000561662 NOB1Q9ULX3 412 aaKnown RBP22.42■■□□□ 1.18
COMMD4-204ENST00000561662 ATP2B2Q01814 1243 aa22.41■■□□□ 1.18
COMMD4-204ENST00000561662 ADGRA1Q86SQ6 560 aa22.41■■□□□ 1.18
COMMD4-204ENST00000561662 LPAR1Q92633 364 aa22.41■■□□□ 1.18
COMMD4-204ENST00000561662 BADQ92934 168 aa22.41■■□□□ 1.18
COMMD4-204ENST00000561662 LTBP2Q14767 1821 aa22.41■■□□□ 1.18
COMMD4-204ENST00000561662 GH2P01242 217 aa22.4■■□□□ 1.18
COMMD4-204ENST00000561662 ARID4AP29374 1257 aaPredicted RBP22.4■■□□□ 1.18
COMMD4-204ENST00000561662 NAA16Q6N069 864 aaPredicted RBP22.4■■□□□ 1.18
COMMD4-204ENST00000561662 USP17L2Q6R6M4 530 aa22.4■■□□□ 1.18
COMMD4-204ENST00000561662 RABGAP1Q9Y3P9 1069 aa22.4■■□□□ 1.18
COMMD4-204ENST00000561662 E9PSI1 815 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms