RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 ADGRA1Q86SQ6 560 aa10.31□□□□□ -0.76
PALB2-202ENST00000561514 TMEM57Q8N5G2 664 aa10.31□□□□□ -0.76
PALB2-202ENST00000561514 DPF3Q92784 378 aa10.31□□□□□ -0.76
PALB2-202ENST00000561514 DEFB118Q96PH6 123 aa10.31□□□□□ -0.76
PALB2-202ENST00000561514 DBNDD2Q9BQY9 259 aa10.31□□□□□ -0.76
PALB2-202ENST00000561514 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.31□□□□□ -0.76
PALB2-202ENST00000561514 AS3MTQ9HBK9 375 aa10.31□□□□□ -0.76
PALB2-202ENST00000561514 TSHZ2Q9NRE2 1034 aa10.31□□□□□ -0.76
PALB2-202ENST00000561514 LRP2BPQ9P2M1 347 aa10.31□□□□□ -0.76
PALB2-202ENST00000561514 SIPA1L1O43166 1804 aa10.3□□□□□ -0.76
PALB2-202ENST00000561514 MAST2Q6P0Q8 1798 aa10.3□□□□□ -0.76
PALB2-202ENST00000561514 C19orf81C9J6K1 198 aa10.3□□□□□ -0.76
PALB2-202ENST00000561514 BAG3O95817 575 aa10.3□□□□□ -0.76
PALB2-202ENST00000561514 XRCC5P13010 732 aaKnown RBP10.3□□□□□ -0.76
PALB2-202ENST00000561514 ZKSCAN2Q63HK3 967 aa10.3□□□□□ -0.76
PALB2-202ENST00000561514 FOXP4Q8IVH2 680 aaPredicted RBP10.3□□□□□ -0.76
PALB2-202ENST00000561514 USP6NLQ92738 828 aa10.3□□□□□ -0.76
PALB2-202ENST00000561514 C12orf42Q96LP6 360 aa10.3□□□□□ -0.76
PALB2-202ENST00000561514 DBNLQ9UJU6 430 aaKnown RBP10.3□□□□□ -0.76
PALB2-202ENST00000561514 RPTORQ8N122 1335 aa10.3□□□□□ -0.76
PALB2-202ENST00000561514 MTMR2Q13614 643 aa10.29□□□□□ -0.76
PALB2-202ENST00000561514 CCDC158Q5M9N0 1113 aa10.29□□□□□ -0.76
PALB2-202ENST00000561514 TTC39AQ5SRH9 613 aa10.29□□□□□ -0.76
PALB2-202ENST00000561514 POTEEQ6S8J3 1075 aa10.29□□□□□ -0.76
PALB2-202ENST00000561514 CERS3Q8IU89 383 aa10.29□□□□□ -0.76
PALB2-202ENST00000561514 GTF3C2Q8WUA4 911 aaPredicted RBP10.29□□□□□ -0.76
PALB2-202ENST00000561514 SOCS4Q8WXH5 440 aa10.29□□□□□ -0.76
PALB2-202ENST00000561514 EHD4Q9H223 541 aa10.29□□□□□ -0.76
PALB2-202ENST00000561514 PIH1D3Q9NQM4 214 aaKnown RBP10.29□□□□□ -0.76
PALB2-202ENST00000561514 AATFQ9NY61 560 aaKnown RBP eCLIP10.29□□□□□ -0.76
PALB2-202ENST00000561514 OGDHLQ9ULD0 1010 aa10.29□□□□□ -0.76
PALB2-202ENST00000561514 ZBTB21Q9ULJ3 1066 aa10.29□□□□□ -0.76
PALB2-202ENST00000561514 MGAMO43451 1857 aa10.28□□□□□ -0.76
PALB2-202ENST00000561514 USP17L10C9JJH3 530 aa10.28□□□□□ -0.76
PALB2-202ENST00000561514 ZAP70P43403 619 aa10.28□□□□□ -0.76
PALB2-202ENST00000561514 HERVK_113P62684 666 aa10.28□□□□□ -0.76
PALB2-202ENST00000561514 SHROOM1Q2M3G4 852 aaPredicted RBP10.28□□□□□ -0.76
PALB2-202ENST00000561514 TATDN1Q6P1N9 297 aa10.28□□□□□ -0.76
PALB2-202ENST00000561514 NECAB2Q7Z6G3 386 aa10.28□□□□□ -0.76
PALB2-202ENST00000561514 MAPKAPK5Q8IW41 473 aa10.28□□□□□ -0.76
PALB2-202ENST00000561514 DIS3LQ8TF46 1054 aaKnown RBP10.28□□□□□ -0.76
PALB2-202ENST00000561514 TGFBRAP1Q8WUH2 860 aa10.28□□□□□ -0.76
PALB2-202ENST00000561514 TRIB2Q92519 343 aa10.28□□□□□ -0.76
PALB2-202ENST00000561514 FRAT1Q92837 279 aaPredicted RBP10.28□□□□□ -0.76
PALB2-202ENST00000561514 CLUAP1Q96AJ1 413 aa10.28□□□□□ -0.76
PALB2-202ENST00000561514 P2RX7Q99572 595 aaKnown RBP10.28□□□□□ -0.76
PALB2-202ENST00000561514 NOL10Q9BSC4 688 aaKnown RBP10.28□□□□□ -0.76
PALB2-202ENST00000561514 TXNRD2Q9NNW7 524 aa10.28□□□□□ -0.76
PALB2-202ENST00000561514 SNRKQ9NRH2 765 aa10.28□□□□□ -0.76
PALB2-202ENST00000561514 EVI5O60447 810 aa10.27□□□□□ -0.77
PALB2-202ENST00000561514 TFRCP02786 760 aaKnown RBP10.27□□□□□ -0.77
PALB2-202ENST00000561514 RLBP1P12271 317 aa10.27□□□□□ -0.77
PALB2-202ENST00000561514 MAPK4P31152 587 aa10.27□□□□□ -0.77
PALB2-202ENST00000561514 BMP8BP34820 402 aa10.27□□□□□ -0.77
PALB2-202ENST00000561514 IRX3P78415 501 aaPredicted RBP10.27□□□□□ -0.77
PALB2-202ENST00000561514 TRIM32Q13049 653 aa10.27□□□□□ -0.77
PALB2-202ENST00000561514 MORN1Q5T089 497 aa10.27□□□□□ -0.77
PALB2-202ENST00000561514 LBX2Q6XYB7 198 aa10.27□□□□□ -0.77
PALB2-202ENST00000561514 TRMT44Q8IYL2 757 aaKnown RBP10.27□□□□□ -0.77
PALB2-202ENST00000561514 GPRC5AQ8NFJ5 357 aa10.27□□□□□ -0.77
PALB2-202ENST00000561514 EAF2Q96CJ1 260 aaPredicted RBP10.27□□□□□ -0.77
PALB2-202ENST00000561514 PAWRQ96IZ0 340 aaKnown RBP10.27□□□□□ -0.77
PALB2-202ENST00000561514 GDF15Q99988 308 aa10.27□□□□□ -0.77
PALB2-202ENST00000561514 HMX1Q9NP08 348 aaPredicted RBP10.27□□□□□ -0.77
PALB2-202ENST00000561514 EMILIN3Q9NT22 766 aa10.27□□□□□ -0.77
PALB2-202ENST00000561514 TLR7Q9NYK1 1049 aaKnown RBP10.27□□□□□ -0.77
PALB2-202ENST00000561514 TMOD4Q9NZQ9 345 aa10.27□□□□□ -0.77
PALB2-202ENST00000561514 RBPJLQ9UBG7 517 aa10.27□□□□□ -0.77
PALB2-202ENST00000561514 PALD1Q9ULE6 856 aa10.27□□□□□ -0.77
PALB2-202ENST00000561514 SURF6O75683 361 aaKnown RBP10.26□□□□□ -0.77
PALB2-202ENST00000561514 GDF11O95390 407 aa10.26□□□□□ -0.77
PALB2-202ENST00000561514 IGHA2P01877 340 aa10.26□□□□□ -0.77
PALB2-202ENST00000561514 HLA-DOAP06340 250 aa10.26□□□□□ -0.77
PALB2-202ENST00000561514 COL6A1P12109 1028 aa10.26□□□□□ -0.77
PALB2-202ENST00000561514 ERVK-9P63128 1117 aa10.26□□□□□ -0.77
PALB2-202ENST00000561514 ERVK-24P63145 666 aa10.26□□□□□ -0.77
PALB2-202ENST00000561514 GPR153Q6NV75 609 aa10.26□□□□□ -0.77
PALB2-202ENST00000561514 NBPF3Q9H094 633 aa10.26□□□□□ -0.77
PALB2-202ENST00000561514 AK9Q5TCS8 1911 aa10.26□□□□□ -0.77
PALB2-202ENST00000561514 SOX1O00570 391 aaPredicted RBP10.25□□□□□ -0.77
PALB2-202ENST00000561514 CNMDO75829 334 aa10.25□□□□□ -0.77
PALB2-202ENST00000561514 PRKAR2AP13861 404 aaKnown RBP10.25□□□□□ -0.77
PALB2-202ENST00000561514 CYP7A1P22680 504 aa10.25□□□□□ -0.77
PALB2-202ENST00000561514 DYNLL1P63167 89 aaKnown RBP10.25□□□□□ -0.77
PALB2-202ENST00000561514 GABPAQ06546 454 aa10.25□□□□□ -0.77
PALB2-202ENST00000561514 CEP85Q6P2H3 762 aa10.25□□□□□ -0.77
PALB2-202ENST00000561514 USP17L2Q6R6M4 530 aa10.25□□□□□ -0.77
PALB2-202ENST00000561514 CRACR2BQ8N4Y2 399 aaPredicted RBP10.25□□□□□ -0.77
PALB2-202ENST00000561514 APBA2Q99767 749 aa10.25□□□□□ -0.77
PALB2-202ENST00000561514 NUDT12Q9BQG2 462 aa10.25□□□□□ -0.77
PALB2-202ENST00000561514 RIOK1Q9BRS2 568 aaKnown RBP10.25□□□□□ -0.77
PALB2-202ENST00000561514 KIAA1683Q9H0B3 1180 aa10.25□□□□□ -0.77
PALB2-202ENST00000561514 PORCNQ9H237 461 aa10.25□□□□□ -0.77
PALB2-202ENST00000561514 RABGAP1Q9Y3P9 1069 aa10.25□□□□□ -0.77
PALB2-202ENST00000561514 PFASO15067 1338 aa10.25□□□□□ -0.77
PALB2-202ENST00000561514 PLXNB2O15031 1838 aa10.24□□□□□ -0.77
PALB2-202ENST00000561514 PEX10O60683 326 aa10.24□□□□□ -0.77
PALB2-202ENST00000561514 GH2P01242 217 aa10.24□□□□□ -0.77
PALB2-202ENST00000561514 HOXC6P09630 235 aa10.24□□□□□ -0.77
PALB2-202ENST00000561514 SHMT1P34896 483 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms