RNA–Protein interactions for RNA: ENST00000561423.2

PRKXP1-201, Transcript of PRKX pseudogene 1, humanhuman

BASIC

Gene PRKXP1, Length 1,122 nt, Biotype processed pseudogene, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKXP1-201ENST00000561423 PALD1Q9ULE6 856 aa17.36■□□□□ 0.37
PRKXP1-201ENST00000561423 HOXA7P31268 230 aaPredicted RBP17.35■□□□□ 0.37
PRKXP1-201ENST00000561423 MNX1P50219 401 aaPredicted RBP17.35■□□□□ 0.37
PRKXP1-201ENST00000561423 CRACR2BQ8N4Y2 399 aaPredicted RBP17.35■□□□□ 0.37
PRKXP1-201ENST00000561423 C1orf115Q9H7X2 142 aa17.35■□□□□ 0.37
PRKXP1-201ENST00000561423 HMX1Q9NP08 348 aaPredicted RBP17.35■□□□□ 0.37
PRKXP1-201ENST00000561423 TLR7Q9NYK1 1049 aaKnown RBP17.35■□□□□ 0.37
PRKXP1-201ENST00000561423 STAP2Q9UGK3 403 aa17.35■□□□□ 0.37
PRKXP1-201ENST00000561423 SAP30BPQ9UHR5 308 aaKnown RBP17.35■□□□□ 0.37
PRKXP1-201ENST00000561423 ZBTB21Q9ULJ3 1066 aa17.35■□□□□ 0.37
PRKXP1-201ENST00000561423 RPTORQ8N122 1335 aa17.35■□□□□ 0.37
PRKXP1-201ENST00000561423 A0A1W2PPC1 479 aa17.34■□□□□ 0.37
PRKXP1-201ENST00000561423 SOX1O00570 391 aaPredicted RBP17.34■□□□□ 0.37
PRKXP1-201ENST00000561423 CYP2B6P20813 491 aa17.34■□□□□ 0.37
PRKXP1-201ENST00000561423 HERVK_113P62684 666 aa17.34■□□□□ 0.37
PRKXP1-201ENST00000561423 DYNLL1P63167 89 aaKnown RBP17.34■□□□□ 0.37
PRKXP1-201ENST00000561423 ATP8B2P98198 1209 aa17.34■□□□□ 0.37
PRKXP1-201ENST00000561423 OS9Q13438 667 aaPredicted RBP17.34■□□□□ 0.37
PRKXP1-201ENST00000561423 ZKSCAN2Q63HK3 967 aa17.34■□□□□ 0.37
PRKXP1-201ENST00000561423 FOXP4Q8IVH2 680 aaPredicted RBP17.34■□□□□ 0.37
PRKXP1-201ENST00000561423 ANKLE1Q8NAG6 615 aa17.34■□□□□ 0.37
PRKXP1-201ENST00000561423 ZNF512BQ96KM6 892 aaPredicted RBP17.34■□□□□ 0.37
PRKXP1-201ENST00000561423 DBNLQ9UJU6 430 aaKnown RBP17.34■□□□□ 0.37
PRKXP1-201ENST00000561423 C19orf81C9J6K1 198 aa17.33■□□□□ 0.36
PRKXP1-201ENST00000561423 USP17L10C9JJH3 530 aa17.33■□□□□ 0.36
PRKXP1-201ENST00000561423 SURF6O75683 361 aaKnown RBP17.33■□□□□ 0.36
PRKXP1-201ENST00000561423 MAP3K21Q5TCX8 1036 aa17.33■□□□□ 0.36
PRKXP1-201ENST00000561423 POTEEQ6S8J3 1075 aa17.33■□□□□ 0.36
PRKXP1-201ENST00000561423 C7orf61Q8IZ16 206 aa17.33■□□□□ 0.36
PRKXP1-201ENST00000561423 TRIM34Q9BYJ4 488 aa17.33■□□□□ 0.36
PRKXP1-201ENST00000561423 RBPJLQ9UBG7 517 aa17.33■□□□□ 0.36
PRKXP1-201ENST00000561423 GPRC5AQ8NFJ5 357 aa17.32■□□□□ 0.36
PRKXP1-201ENST00000561423 LRCH3Q96II8 777 aa17.32■□□□□ 0.36
PRKXP1-201ENST00000561423 EMILIN3Q9NT22 766 aa17.32■□□□□ 0.36
PRKXP1-201ENST00000561423 GINM1Q9NU53 330 aa17.32■□□□□ 0.36
PRKXP1-201ENST00000561423 OGDHLQ9ULD0 1010 aa17.32■□□□□ 0.36
PRKXP1-201ENST00000561423 ZMYND8Q9ULU4 1186 aaPredicted RBP17.32■□□□□ 0.36
PRKXP1-201ENST00000561423 NOP58Q9Y2X3 529 aaKnown RBP17.32■□□□□ 0.36
PRKXP1-201ENST00000561423 PLXNB2O15031 1838 aa17.32■□□□□ 0.36
PRKXP1-201ENST00000561423 DOCK3Q8IZD9 2030 aa17.31■□□□□ 0.36
PRKXP1-201ENST00000561423 HLA-DOAP06340 250 aa17.31■□□□□ 0.36
PRKXP1-201ENST00000561423 PRKAR2AP13861 404 aaKnown RBP17.31■□□□□ 0.36
PRKXP1-201ENST00000561423 CYP7A1P22680 504 aa17.31■□□□□ 0.36
PRKXP1-201ENST00000561423 Q3C1V9 767 aa17.31■□□□□ 0.36
PRKXP1-201ENST00000561423 SOCS4Q8WXH5 440 aa17.31■□□□□ 0.36
PRKXP1-201ENST00000561423 GDF15Q99988 308 aa17.31■□□□□ 0.36
PRKXP1-201ENST00000561423 NUDT12Q9BQG2 462 aa17.31■□□□□ 0.36
PRKXP1-201ENST00000561423 NBPF3Q9H094 633 aa17.31■□□□□ 0.36
PRKXP1-201ENST00000561423 CCDC8Q9H0W5 538 aaPredicted RBP17.31■□□□□ 0.36
PRKXP1-201ENST00000561423 PORCNQ9H237 461 aa17.31■□□□□ 0.36
PRKXP1-201ENST00000561423 ALPK3Q96L96 1907 aa17.3■□□□□ 0.36
PRKXP1-201ENST00000561423 IGSF3O75054 1194 aa17.3■□□□□ 0.36
PRKXP1-201ENST00000561423 GH2P01242 217 aa17.3■□□□□ 0.36
PRKXP1-201ENST00000561423 XRCC5P13010 732 aaKnown RBP17.3■□□□□ 0.36
PRKXP1-201ENST00000561423 ERVK-9P63128 1117 aa17.3■□□□□ 0.36
PRKXP1-201ENST00000561423 ERVK-24P63145 666 aa17.3■□□□□ 0.36
PRKXP1-201ENST00000561423 MIGA1Q8NAN2 632 aa17.3■□□□□ 0.36
PRKXP1-201ENST00000561423 USP6NLQ92738 828 aa17.3■□□□□ 0.36
PRKXP1-201ENST00000561423 EAF2Q96CJ1 260 aaPredicted RBP17.3■□□□□ 0.36
PRKXP1-201ENST00000561423 PAGR1Q9BTK6 254 aa17.3■□□□□ 0.36
PRKXP1-201ENST00000561423 C11orf49Q9H6J7 331 aa17.3■□□□□ 0.36
PRKXP1-201ENST00000561423 NDUFB9Q9Y6M9 179 aa17.3■□□□□ 0.36
PRKXP1-201ENST00000561423 PFASO15067 1338 aa17.29■□□□□ 0.36
PRKXP1-201ENST00000561423 IDH1O75874 414 aaKnown RBP17.29■□□□□ 0.36
PRKXP1-201ENST00000561423 MAPK4P31152 587 aa17.29■□□□□ 0.36
PRKXP1-201ENST00000561423 GPR142Q7Z601 462 aa17.29■□□□□ 0.36
PRKXP1-201ENST00000561423 FOCADQ5VW36 1801 aa17.28■□□□□ 0.36
PRKXP1-201ENST00000561423 RLBP1P12271 317 aa17.28■□□□□ 0.36
PRKXP1-201ENST00000561423 ZKSCAN1P17029 563 aaPredicted RBP17.28■□□□□ 0.36
PRKXP1-201ENST00000561423 SYN1P17600 705 aa17.28■□□□□ 0.36
PRKXP1-201ENST00000561423 CACNB2Q08289 660 aaPredicted RBP17.28■□□□□ 0.36
PRKXP1-201ENST00000561423 PDE3AQ14432 1141 aa17.28■□□□□ 0.36
PRKXP1-201ENST00000561423 ZYXQ15942 572 aaKnown RBP17.28■□□□□ 0.36
PRKXP1-201ENST00000561423 CCL14Q16627 93 aa17.28■□□□□ 0.36
PRKXP1-201ENST00000561423 MORN1Q5T089 497 aa17.28■□□□□ 0.36
PRKXP1-201ENST00000561423 TATDN1Q6P1N9 297 aa17.28■□□□□ 0.36
PRKXP1-201ENST00000561423 USP17L2Q6R6M4 530 aa17.28■□□□□ 0.36
PRKXP1-201ENST00000561423 MAGEB6Q8N7X4 407 aa17.28■□□□□ 0.36
PRKXP1-201ENST00000561423 GTF3C2Q8WUA4 911 aaPredicted RBP17.28■□□□□ 0.36
PRKXP1-201ENST00000561423 C12orf42Q96LP6 360 aa17.28■□□□□ 0.36
PRKXP1-201ENST00000561423 ANTXR1Q9H6X2 564 aa17.28■□□□□ 0.36
PRKXP1-201ENST00000561423 CDK5RAP2Q96SN8 1893 aa17.28■□□□□ 0.36
PRKXP1-201ENST00000561423 DDX60LQ5H9U9 1706 aaKnown RBP17.27■□□□□ 0.36
PRKXP1-201ENST00000561423 CNMDO75829 334 aa17.27■□□□□ 0.36
PRKXP1-201ENST00000561423 BMP8BP34820 402 aa17.27■□□□□ 0.36
PRKXP1-201ENST00000561423 PLEKHH3Q7Z736 793 aa17.27■□□□□ 0.36
PRKXP1-201ENST00000561423 ITPRIPQ8IWB1 547 aa17.27■□□□□ 0.36
PRKXP1-201ENST00000561423 EHD4Q9H223 541 aa17.27■□□□□ 0.36
PRKXP1-201ENST00000561423 LAMA3Q16787 3333 aa17.26■□□□□ 0.35
PRKXP1-201ENST00000561423 CCND3P30281 292 aaPredicted RBP17.26■□□□□ 0.35
PRKXP1-201ENST00000561423 RGS2P41220 211 aa17.26■□□□□ 0.35
PRKXP1-201ENST00000561423 USP5P45974 858 aa17.26■□□□□ 0.35
PRKXP1-201ENST00000561423 FTSJ3Q8IY81 847 aaKnown RBP17.26■□□□□ 0.35
PRKXP1-201ENST00000561423 TRMT44Q8IYL2 757 aaKnown RBP17.26■□□□□ 0.35
PRKXP1-201ENST00000561423 FEZ1Q99689 392 aa17.26■□□□□ 0.35
PRKXP1-201ENST00000561423 APBA2Q99767 749 aa17.26■□□□□ 0.35
PRKXP1-201ENST00000561423 SERPINB13Q9UIV8 391 aa17.26■□□□□ 0.35
PRKXP1-201ENST00000561423 MYO5AQ9Y4I1 1855 aaKnown RBP17.25■□□□□ 0.35
PRKXP1-201ENST00000561423 COL6A1P12109 1028 aa17.25■□□□□ 0.35
PRKXP1-201ENST00000561423 MAGEA10P43363 369 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms