RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 EMILIN2Q9BXX0 1053 aa7.18□□□□□ -1.26
USP8-216ENST00000561206 SLC6A17Q9H1V8 727 aa7.18□□□□□ -1.26
USP8-216ENST00000561206 OTOL1A6NHN0 477 aaPredicted RBP7.17□□□□□ -1.26
USP8-216ENST00000561206 SASH1O94885 1247 aa7.17□□□□□ -1.26
USP8-216ENST00000561206 NME2P22392 152 aa7.17□□□□□ -1.26
USP8-216ENST00000561206 FGD1P98174 961 aa7.17□□□□□ -1.26
USP8-216ENST00000561206 GRM2Q14416 872 aa7.17□□□□□ -1.26
USP8-216ENST00000561206 MAP1SQ66K74 1059 aaPredicted RBP7.17□□□□□ -1.26
USP8-216ENST00000561206 LILRA2Q8N149 483 aa7.17□□□□□ -1.26
USP8-216ENST00000561206 UBE2FQ969M7 185 aa7.17□□□□□ -1.26
USP8-216ENST00000561206 CAP2P40123 477 aa7.16□□□□□ -1.26
USP8-216ENST00000561206 HK2P52789 917 aa7.16□□□□□ -1.26
USP8-216ENST00000561206 ORC1Q13415 861 aa7.16□□□□□ -1.26
USP8-216ENST00000561206 CCDC74AQ96AQ1 378 aa7.16□□□□□ -1.26
USP8-216ENST00000561206 COX4I2Q96KJ9 171 aa7.16□□□□□ -1.26
USP8-216ENST00000561206 ZNF552Q9H707 407 aaPredicted RBP7.16□□□□□ -1.26
USP8-216ENST00000561206 GPN3Q9UHW5 284 aaPredicted RBP7.16□□□□□ -1.26
USP8-216ENST00000561206 XRCC5P13010 732 aaKnown RBP7.15□□□□□ -1.26
USP8-216ENST00000561206 SPATS1Q496A3 300 aa7.15□□□□□ -1.26
USP8-216ENST00000561206 CDC37L1Q7L3B6 337 aa7.15□□□□□ -1.26
USP8-216ENST00000561206 CCDC97Q96F63 343 aaPredicted RBP7.15□□□□□ -1.26
USP8-216ENST00000561206 NR0B2Q15466 257 aa7.14□□□□□ -1.27
USP8-216ENST00000561206 PDZD8Q8NEN9 1154 aa7.14□□□□□ -1.27
USP8-216ENST00000561206 ADAMTS10Q9H324 1103 aa7.14□□□□□ -1.27
USP8-216ENST00000561206 CWC22Q9HCG8 908 aaKnown RBP7.14□□□□□ -1.27
USP8-216ENST00000561206 TPX2Q9ULW0 747 aaKnown RBP7.14□□□□□ -1.27
USP8-216ENST00000561206 TRHRP34981 398 aaPredicted RBP7.13□□□□□ -1.27
USP8-216ENST00000561206 KIR3DL1P43629 444 aa7.13□□□□□ -1.27
USP8-216ENST00000561206 SSPNQ14714 243 aa7.13□□□□□ -1.27
USP8-216ENST00000561206 SCARA3Q6AZY7 606 aa7.13□□□□□ -1.27
USP8-216ENST00000561206 DTHD1Q6ZMT9 781 aa7.13□□□□□ -1.27
USP8-216ENST00000561206 ZNF605Q86T29 641 aa7.13□□□□□ -1.27
USP8-216ENST00000561206 DACT3Q96B18 629 aaPredicted RBP7.13□□□□□ -1.27
USP8-216ENST00000561206 ACSBG1Q96GR2 724 aa7.13□□□□□ -1.27
USP8-216ENST00000561206 TEPSINQ96N21 525 aa7.13□□□□□ -1.27
USP8-216ENST00000561206 FAM129BQ96TA1 746 aa7.13□□□□□ -1.27
USP8-216ENST00000561206 ZSWIM5Q9P217 1185 aa7.13□□□□□ -1.27
USP8-216ENST00000561206 SERPINA10Q9UK55 444 aa7.13□□□□□ -1.27
USP8-216ENST00000561206 YBX2Q9Y2T7 364 aaKnown RBP7.13□□□□□ -1.27
USP8-216ENST00000561206 GADD45BO75293 160 aaPredicted RBP7.12□□□□□ -1.27
USP8-216ENST00000561206 TRIM37O94972 964 aa7.12□□□□□ -1.27
USP8-216ENST00000561206 SLBPQ14493 270 aaKnown RBP eCLIP7.12□□□□□ -1.27
USP8-216ENST00000561206 ZNF746Q6NUN9 644 aaPredicted RBP7.12□□□□□ -1.27
USP8-216ENST00000561206 C12orf40Q86WS4 652 aa7.12□□□□□ -1.27
USP8-216ENST00000561206 MFSD2AQ8NA29 543 aa7.12□□□□□ -1.27
USP8-216ENST00000561206 PIWIL2Q8TC59 973 aaKnown RBP7.12□□□□□ -1.27
USP8-216ENST00000561206 ZNF507Q8TCN5 953 aa7.12□□□□□ -1.27
USP8-216ENST00000561206 MTMR7Q9Y216 660 aa7.12□□□□□ -1.27
USP8-216ENST00000561206 CSADQ9Y600 493 aa7.12□□□□□ -1.27
USP8-216ENST00000561206 IGHA2P01877 340 aa7.11□□□□□ -1.27
USP8-216ENST00000561206 MPRIPQ6WCQ1 1025 aa7.11□□□□□ -1.27
USP8-216ENST00000561206 INTS4Q96HW7 963 aaKnown RBP7.11□□□□□ -1.27
USP8-216ENST00000561206 MYRFQ9Y2G1 1151 aa7.11□□□□□ -1.27
USP8-216ENST00000561206 DCDC2CA8MYV0 355 aa7.1□□□□□ -1.27
USP8-216ENST00000561206 TNK2Q07912 1038 aa7.1□□□□□ -1.27
USP8-216ENST00000561206 GAB4Q2WGN9 574 aa7.1□□□□□ -1.27
USP8-216ENST00000561206 MIPEPQ99797 713 aa7.1□□□□□ -1.27
USP8-216ENST00000561206 PICK1Q9NRD5 415 aa7.1□□□□□ -1.27
USP8-216ENST00000561206 SLC22A31A6NKX4 558 aa7.09□□□□□ -1.27
USP8-216ENST00000561206 EIF1AYO14602 144 aaKnown RBP7.09□□□□□ -1.27
USP8-216ENST00000561206 ZGLP1P0C6A0 271 aa7.09□□□□□ -1.27
USP8-216ENST00000561206 FCGRTP55899 365 aa7.09□□□□□ -1.27
USP8-216ENST00000561206 PDE3BQ13370 1112 aa7.09□□□□□ -1.27
USP8-216ENST00000561206 TIGD5Q53EQ6 642 aa7.09□□□□□ -1.27
USP8-216ENST00000561206 FITM1A5D6W6 292 aa7.08□□□□□ -1.28
USP8-216ENST00000561206 SUV39H1O43463 412 aa7.08□□□□□ -1.28
USP8-216ENST00000561206 SNX17Q15036 470 aa7.08□□□□□ -1.28
USP8-216ENST00000561206 TMEM132EQ6IEE7 984 aa7.08□□□□□ -1.28
USP8-216ENST00000561206 OXR1Q8N573 874 aa7.08□□□□□ -1.28
USP8-216ENST00000561206 SIGLEC10Q96LC7 697 aa7.08□□□□□ -1.28
USP8-216ENST00000561206 SGPP1Q9BX95 441 aa7.08□□□□□ -1.28
USP8-216ENST00000561206 C19orf44Q9H6X5 657 aa7.08□□□□□ -1.28
USP8-216ENST00000561206 BRPF3Q9ULD4 1205 aa7.08□□□□□ -1.28
USP8-216ENST00000561206 ZC3H12DA2A288 527 aaKnown RBP7.07□□□□□ -1.28
USP8-216ENST00000561206 TMEM88BA6NKF7 163 aa7.07□□□□□ -1.28
USP8-216ENST00000561206 HRKO00198 91 aa7.07□□□□□ -1.28
USP8-216ENST00000561206 BMP6P22004 513 aa7.07□□□□□ -1.28
USP8-216ENST00000561206 LETMD1Q6P1Q0 360 aa7.07□□□□□ -1.28
USP8-216ENST00000561206 SP8Q8IXZ3 490 aa7.07□□□□□ -1.28
USP8-216ENST00000561206 RIN3Q8TB24 985 aa7.07□□□□□ -1.28
USP8-216ENST00000561206 FEZF2Q8TBJ5 459 aa7.07□□□□□ -1.28
USP8-216ENST00000561206 FBRSQ9HAH7 460 aa7.07□□□□□ -1.28
USP8-216ENST00000561206 CBX7O95931 251 aa7.06□□□□□ -1.28
USP8-216ENST00000561206 PI3P19957 117 aa7.06□□□□□ -1.28
USP8-216ENST00000561206 AFF3P51826 1226 aaKnown RBP7.06□□□□□ -1.28
USP8-216ENST00000561206 PHLDB3Q6NSJ2 640 aa7.06□□□□□ -1.28
USP8-216ENST00000561206 GRIN3AQ8TCU5 1115 aa7.06□□□□□ -1.28
USP8-216ENST00000561206 PANK1Q8TE04 598 aa7.06□□□□□ -1.28
USP8-216ENST00000561206 CITED4Q96RK1 184 aa7.06□□□□□ -1.28
USP8-216ENST00000561206 EGFL7Q9UHF1 273 aa7.06□□□□□ -1.28
USP8-216ENST00000561206 CNOT11Q9UKZ1 510 aaKnown RBP7.06□□□□□ -1.28
USP8-216ENST00000561206 ARID3CA6NKF2 412 aa7.05□□□□□ -1.28
USP8-216ENST00000561206 CYP7A1P22680 504 aa7.05□□□□□ -1.28
USP8-216ENST00000561206 FRMD5Q7Z6J6 570 aa7.05□□□□□ -1.28
USP8-216ENST00000561206 EPS8L3Q8TE67 593 aaKnown RBP7.05□□□□□ -1.28
USP8-216ENST00000561206 NECAB3Q96P71 396 aaPredicted RBP7.05□□□□□ -1.28
USP8-216ENST00000561206 CBX8Q9HC52 389 aa7.05□□□□□ -1.28
USP8-216ENST00000561206 LUC7LQ9NQ29 371 aaKnown RBP7.05□□□□□ -1.28
USP8-216ENST00000561206 PPP4R2Q9NY27 417 aa7.05□□□□□ -1.28
USP8-216ENST00000561206 INSRRP14616 1297 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms