RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 PPIL2Q13356 520 aa11.49□□□□□ -0.57
RABGGTA-221ENST00000561055 OPTNQ96CV9 577 aa11.49□□□□□ -0.57
RABGGTA-221ENST00000561055 CCDC17Q96LX7 622 aa11.49□□□□□ -0.57
RABGGTA-221ENST00000561055 TRIM34Q9BYJ4 488 aa11.49□□□□□ -0.57
RABGGTA-221ENST00000561055 ELP3Q9H9T3 547 aa11.49□□□□□ -0.57
RABGGTA-221ENST00000561055 KCNH4Q9UQ05 1017 aa11.49□□□□□ -0.57
RABGGTA-221ENST00000561055 MANSC4A6NHS7 340 aaPredicted RBP11.48□□□□□ -0.57
RABGGTA-221ENST00000561055 SMIM22K7EJ46 135 aa11.48□□□□□ -0.57
RABGGTA-221ENST00000561055 FGRP09769 529 aa11.48□□□□□ -0.57
RABGGTA-221ENST00000561055 CDK8P49336 464 aa11.48□□□□□ -0.57
RABGGTA-221ENST00000561055 JAG1P78504 1218 aa11.48□□□□□ -0.57
RABGGTA-221ENST00000561055 SLC4A8Q2Y0W8 1093 aa11.48□□□□□ -0.57
RABGGTA-221ENST00000561055 CERKLQ49MI3 558 aaPredicted RBP11.48□□□□□ -0.57
RABGGTA-221ENST00000561055 MS4A4AQ96JQ5 239 aa11.48□□□□□ -0.57
RABGGTA-221ENST00000561055 WDR18Q9BV38 432 aa11.48□□□□□ -0.57
RABGGTA-221ENST00000561055 PICK1Q9NRD5 415 aa11.48□□□□□ -0.57
RABGGTA-221ENST00000561055 AFG3L2Q9Y4W6 797 aa11.48□□□□□ -0.57
RABGGTA-221ENST00000561055 PARP14Q460N5 1801 aa11.48□□□□□ -0.57
RABGGTA-221ENST00000561055 USP17L5A8MUK1 530 aa11.47□□□□□ -0.57
RABGGTA-221ENST00000561055 MINDY4BA8MYZ0 360 aa11.47□□□□□ -0.57
RABGGTA-221ENST00000561055 CXCL11O14625 94 aa11.47□□□□□ -0.57
RABGGTA-221ENST00000561055 IRF6O14896 467 aa11.47□□□□□ -0.57
RABGGTA-221ENST00000561055 CDC45O75419 566 aa11.47□□□□□ -0.57
RABGGTA-221ENST00000561055 SLC3A2P08195 630 aaKnown RBP11.47□□□□□ -0.57
RABGGTA-221ENST00000561055 PCP11498 1178 aaKnown RBP11.47□□□□□ -0.57
RABGGTA-221ENST00000561055 KIF23Q02241 960 aaPredicted RBP11.47□□□□□ -0.57
RABGGTA-221ENST00000561055 PPARAQ07869 468 aa11.47□□□□□ -0.57
RABGGTA-221ENST00000561055 PAXIP1Q6ZW49 1069 aaPredicted RBP11.47□□□□□ -0.57
RABGGTA-221ENST00000561055 CNKSR2Q8WXI2 1034 aa11.47□□□□□ -0.57
RABGGTA-221ENST00000561055 MAP4K1Q92918 833 aa11.47□□□□□ -0.57
RABGGTA-221ENST00000561055 DYNLL2Q96FJ2 89 aa11.47□□□□□ -0.57
RABGGTA-221ENST00000561055 ZIC5Q96T25 663 aa11.47□□□□□ -0.57
RABGGTA-221ENST00000561055 ESYT1Q9BSJ8 1104 aa11.47□□□□□ -0.57
RABGGTA-221ENST00000561055 ZNF287Q9HBT7 754 aa11.47□□□□□ -0.57
RABGGTA-221ENST00000561055 CTNNA3Q9UI47 895 aa11.47□□□□□ -0.57
RABGGTA-221ENST00000561055 ZBTB21Q9ULJ3 1066 aa11.47□□□□□ -0.57
RABGGTA-221ENST00000561055 AOC2O75106 756 aa11.46□□□□□ -0.57
RABGGTA-221ENST00000561055 RASA1P20936 1047 aa11.46□□□□□ -0.57
RABGGTA-221ENST00000561055 NT5C2P49902 561 aa11.46□□□□□ -0.57
RABGGTA-221ENST00000561055 GTF2A2P52657 109 aa11.46□□□□□ -0.57
RABGGTA-221ENST00000561055 MAP2K1Q02750 393 aaPredicted RBP11.46□□□□□ -0.57
RABGGTA-221ENST00000561055 PDE4BQ07343 736 aa11.46□□□□□ -0.57
RABGGTA-221ENST00000561055 ABCB5Q2M3G0 1257 aa11.46□□□□□ -0.57
RABGGTA-221ENST00000561055 TMEM179Q6ZVK1 233 aa11.46□□□□□ -0.57
RABGGTA-221ENST00000561055 SLC44A5Q8NCS7 719 aa11.46□□□□□ -0.57
RABGGTA-221ENST00000561055 OTUD5Q96G74 571 aa11.46□□□□□ -0.57
RABGGTA-221ENST00000561055 AS3MTQ9HBK9 375 aa11.46□□□□□ -0.57
RABGGTA-221ENST00000561055 ZCCHC17Q9NP64 241 aaKnown RBP11.46□□□□□ -0.57
RABGGTA-221ENST00000561055 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.46□□□□□ -0.57
RABGGTA-221ENST00000561055 RLFQ13129 1914 aa11.45□□□□□ -0.58
RABGGTA-221ENST00000561055 PLIN4Q96Q06 1357 aa11.45□□□□□ -0.58
RABGGTA-221ENST00000561055 ORC4O43929 436 aa11.45□□□□□ -0.58
RABGGTA-221ENST00000561055 GH2P01242 217 aa11.45□□□□□ -0.58
RABGGTA-221ENST00000561055 GUCY1A2P33402 732 aa11.45□□□□□ -0.58
RABGGTA-221ENST00000561055 PTH1RQ03431 593 aa11.45□□□□□ -0.58
RABGGTA-221ENST00000561055 SREBF2Q12772 1141 aa11.45□□□□□ -0.58
RABGGTA-221ENST00000561055 SNAPC2Q13487 334 aa11.45□□□□□ -0.58
RABGGTA-221ENST00000561055 SH3D19Q5HYK7 790 aa11.45□□□□□ -0.58
RABGGTA-221ENST00000561055 CASC1Q6TDU7 716 aa11.45□□□□□ -0.58
RABGGTA-221ENST00000561055 ZNF280CQ8ND82 737 aa11.45□□□□□ -0.58
RABGGTA-221ENST00000561055 CFHR5Q9BXR6 569 aa11.45□□□□□ -0.58
RABGGTA-221ENST00000561055 MKNK2Q9HBH9 465 aa11.45□□□□□ -0.58
RABGGTA-221ENST00000561055 CABP5Q9NP86 173 aa11.45□□□□□ -0.58
RABGGTA-221ENST00000561055 WBP1LQ9NX94 342 aa11.45□□□□□ -0.58
RABGGTA-221ENST00000561055 ZHX2Q9Y6X8 837 aa11.45□□□□□ -0.58
RABGGTA-221ENST00000561055 A0A0G2JLL6 359 aaPredicted RBP11.44□□□□□ -0.58
RABGGTA-221ENST00000561055 C19orf81C9J6K1 198 aa11.44□□□□□ -0.58
RABGGTA-221ENST00000561055 ZNF213O14771 459 aa11.44□□□□□ -0.58
RABGGTA-221ENST00000561055 GDF11O95390 407 aa11.44□□□□□ -0.58
RABGGTA-221ENST00000561055 CETPP11597 493 aa11.44□□□□□ -0.58
RABGGTA-221ENST00000561055 AKR1B1P15121 316 aa11.44□□□□□ -0.58
RABGGTA-221ENST00000561055 GRM1Q13255 1194 aa11.44□□□□□ -0.58
RABGGTA-221ENST00000561055 MOGSQ13724 837 aa11.44□□□□□ -0.58
RABGGTA-221ENST00000561055 SHROOM1Q2M3G4 852 aaPredicted RBP11.44□□□□□ -0.58
RABGGTA-221ENST00000561055 AKNAD1Q5T1N1 836 aa11.44□□□□□ -0.58
RABGGTA-221ENST00000561055 COL13A1Q5TAT6 717 aaPredicted RBP11.44□□□□□ -0.58
RABGGTA-221ENST00000561055 PRRT2Q7Z6L0 340 aaPredicted RBP11.44□□□□□ -0.58
RABGGTA-221ENST00000561055 ZNF444Q8N0Y2 327 aaPredicted RBP11.44□□□□□ -0.58
RABGGTA-221ENST00000561055 STAG1Q8WVM7 1258 aa11.44□□□□□ -0.58
RABGGTA-221ENST00000561055 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.44□□□□□ -0.58
RABGGTA-221ENST00000561055 LSG1Q9H089 658 aaKnown RBP11.44□□□□□ -0.58
RABGGTA-221ENST00000561055 NBPF3Q9H094 633 aa11.44□□□□□ -0.58
RABGGTA-221ENST00000561055 TACC3Q9Y6A5 838 aa11.44□□□□□ -0.58
RABGGTA-221ENST00000561055 U3KPZ7 1027 aaPredicted RBP11.44□□□□□ -0.58
RABGGTA-221ENST00000561055 MGAMO43451 1857 aa11.44□□□□□ -0.58
RABGGTA-221ENST00000561055 IGKV6D-41A0A0C4DH26 115 aa11.43□□□□□ -0.58
RABGGTA-221ENST00000561055 EPB41L2O43491 1005 aaKnown RBP11.43□□□□□ -0.58
RABGGTA-221ENST00000561055 CA12O43570 354 aa11.43□□□□□ -0.58
RABGGTA-221ENST00000561055 BACE1P56817 501 aa11.43□□□□□ -0.58
RABGGTA-221ENST00000561055 CTDSPL2Q05D32 466 aa11.43□□□□□ -0.58
RABGGTA-221ENST00000561055 SPP2Q13103 211 aa11.43□□□□□ -0.58
RABGGTA-221ENST00000561055 SEPT2Q15019 361 aa11.43□□□□□ -0.58
RABGGTA-221ENST00000561055 IMMTQ16891 758 aaKnown RBP11.43□□□□□ -0.58
RABGGTA-221ENST00000561055 KIAA1211Q6ZU35 1233 aa11.43□□□□□ -0.58
RABGGTA-221ENST00000561055 IFNL1Q8IU54 200 aa11.43□□□□□ -0.58
RABGGTA-221ENST00000561055 SIAH1Q8IUQ4 282 aa11.43□□□□□ -0.58
RABGGTA-221ENST00000561055 PROCA1Q8NCQ7 364 aaPredicted RBP11.43□□□□□ -0.58
RABGGTA-221ENST00000561055 NEDD1Q8NHV4 660 aa11.43□□□□□ -0.58
RABGGTA-221ENST00000561055 BRI3BPQ8WY22 251 aa11.43□□□□□ -0.58
RABGGTA-221ENST00000561055 PTPN18Q99952 460 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms