RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 SNAP23O00161 211 aa6.69□□□□□ -1.34
ZEB1-220ENST00000560909 IGSF3O75054 1194 aa6.69□□□□□ -1.34
ZEB1-220ENST00000560909 GLRX3O76003 335 aaKnown RBP6.69□□□□□ -1.34
ZEB1-220ENST00000560909 IFIT2P09913 472 aaKnown RBP6.69□□□□□ -1.34
ZEB1-220ENST00000560909 IFIT1P09914 478 aaKnown RBP6.69□□□□□ -1.34
ZEB1-220ENST00000560909 SLC5A1P13866 664 aa6.69□□□□□ -1.34
ZEB1-220ENST00000560909 MX1P20591 662 aa6.69□□□□□ -1.34
ZEB1-220ENST00000560909 ARID4AP29374 1257 aaPredicted RBP6.69□□□□□ -1.34
ZEB1-220ENST00000560909 ADORA1P30542 326 aa6.69□□□□□ -1.34
ZEB1-220ENST00000560909 CTSOP43234 321 aaPredicted RBP6.69□□□□□ -1.34
ZEB1-220ENST00000560909 CCDC93Q567U6 631 aa6.69□□□□□ -1.34
ZEB1-220ENST00000560909 CCDC102BQ68D86 513 aa6.69□□□□□ -1.34
ZEB1-220ENST00000560909 FOXR1Q6PIV2 292 aa6.69□□□□□ -1.34
ZEB1-220ENST00000560909 OLFM4Q6UX06 510 aa6.69□□□□□ -1.34
ZEB1-220ENST00000560909 LINC00114Q6XXX2 140 aa6.69□□□□□ -1.34
ZEB1-220ENST00000560909 TXNRD3Q86VQ6 643 aa6.69□□□□□ -1.34
ZEB1-220ENST00000560909 ZNF837Q96EG3 531 aaPredicted RBP6.69□□□□□ -1.34
ZEB1-220ENST00000560909 CCDC8Q9H0W5 538 aaPredicted RBP6.69□□□□□ -1.34
ZEB1-220ENST00000560909 TLR7Q9NYK1 1049 aaKnown RBP6.69□□□□□ -1.34
ZEB1-220ENST00000560909 NSFL1CQ9UNZ2 370 aaKnown RBP6.69□□□□□ -1.34
ZEB1-220ENST00000560909 DUOX1Q9NRD9 1551 aa6.69□□□□□ -1.34
ZEB1-220ENST00000560909 SLX4Q8IY92 1834 aa6.69□□□□□ -1.34
ZEB1-220ENST00000560909 APBB1O00213 710 aa6.68□□□□□ -1.34
ZEB1-220ENST00000560909 NFKBIEO00221 500 aa6.68□□□□□ -1.34
ZEB1-220ENST00000560909 C21orf2O43822 256 aa6.68□□□□□ -1.34
ZEB1-220ENST00000560909 UFL1O94874 794 aa6.68□□□□□ -1.34
ZEB1-220ENST00000560909 UQCRFS1P1P0C7P4 283 aa6.68□□□□□ -1.34
ZEB1-220ENST00000560909 IL1R1P14778 569 aa6.68□□□□□ -1.34
ZEB1-220ENST00000560909 KLRK1P26718 216 aa6.68□□□□□ -1.34
ZEB1-220ENST00000560909 PHKA1P46020 1223 aa6.68□□□□□ -1.34
ZEB1-220ENST00000560909 FKBP4Q02790 459 aaKnown RBP eCLIP6.68□□□□□ -1.34
ZEB1-220ENST00000560909 KIAA2012Q0VF49 1180 aa6.68□□□□□ -1.34
ZEB1-220ENST00000560909 BMP2KLQ5H9B9 411 aa6.68□□□□□ -1.34
ZEB1-220ENST00000560909 DPP8Q6V1X1 898 aaPredicted RBP6.68□□□□□ -1.34
ZEB1-220ENST00000560909 SUPT20HQ8NEM7 779 aa6.68□□□□□ -1.34
ZEB1-220ENST00000560909 TDRD7Q8NHU6 1098 aaKnown RBP6.68□□□□□ -1.34
ZEB1-220ENST00000560909 HAUS7Q99871 368 aa6.68□□□□□ -1.34
ZEB1-220ENST00000560909 EVA1BQ9NVM1 165 aa6.68□□□□□ -1.34
ZEB1-220ENST00000560909 ANKIB1Q9P2G1 1089 aa6.68□□□□□ -1.34
ZEB1-220ENST00000560909 TAF1P21675 1872 aa6.68□□□□□ -1.34
ZEB1-220ENST00000560909 BRCA1P38398 1863 aaKnown RBP6.67□□□□□ -1.34
ZEB1-220ENST00000560909 ERC2O15083 957 aa6.67□□□□□ -1.34
ZEB1-220ENST00000560909 KDM4AO75164 1064 aa6.67□□□□□ -1.34
ZEB1-220ENST00000560909 GSPT1P15170 499 aaKnown RBP6.67□□□□□ -1.34
ZEB1-220ENST00000560909 HIBADHP31937 336 aaKnown RBP6.67□□□□□ -1.34
ZEB1-220ENST00000560909 CCDC158Q5M9N0 1113 aa6.67□□□□□ -1.34
ZEB1-220ENST00000560909 TTC22Q5TAA0 569 aa6.67□□□□□ -1.34
ZEB1-220ENST00000560909 SKAP1Q86WV1 359 aa6.67□□□□□ -1.34
ZEB1-220ENST00000560909 GPATCH3Q96I76 525 aa6.67□□□□□ -1.34
ZEB1-220ENST00000560909 NEUROD6Q96NK8 337 aa6.67□□□□□ -1.34
ZEB1-220ENST00000560909 EYA3Q99504 573 aa6.67□□□□□ -1.34
ZEB1-220ENST00000560909 OXCT2Q9BYC2 517 aaPredicted RBP6.67□□□□□ -1.34
ZEB1-220ENST00000560909 COA1Q9GZY4 146 aa6.67□□□□□ -1.34
ZEB1-220ENST00000560909 TMX4Q9H1E5 349 aaPredicted RBP6.67□□□□□ -1.34
ZEB1-220ENST00000560909 CD209Q9NNX6 404 aa6.67□□□□□ -1.34
ZEB1-220ENST00000560909 FAM205AQ6ZU69 1335 aa6.67□□□□□ -1.34
ZEB1-220ENST00000560909 SALL1Q9NSC2 1324 aa6.67□□□□□ -1.34
ZEB1-220ENST00000560909 MCAMP43121 646 aa6.66□□□□□ -1.34
ZEB1-220ENST00000560909 GYG1P46976 350 aa6.66□□□□□ -1.34
ZEB1-220ENST00000560909 PRELPP51888 382 aa6.66□□□□□ -1.34
ZEB1-220ENST00000560909 FKBP1AP62942 108 aaKnown RBP6.66□□□□□ -1.34
ZEB1-220ENST00000560909 KCNH2Q12809 1159 aa6.66□□□□□ -1.34
ZEB1-220ENST00000560909 RASGRF1Q13972 1273 aa6.66□□□□□ -1.34
ZEB1-220ENST00000560909 WASHC4Q2M389 1173 aa6.66□□□□□ -1.34
ZEB1-220ENST00000560909 CAVIN4Q5BKX8 364 aa6.66□□□□□ -1.34
ZEB1-220ENST00000560909 TMED8Q6PL24 325 aaPredicted RBP6.66□□□□□ -1.34
ZEB1-220ENST00000560909 ZC3H12CQ9C0D7 883 aaKnown RBP6.66□□□□□ -1.34
ZEB1-220ENST00000560909 GNL3LQ9NVN8 582 aaKnown RBP6.66□□□□□ -1.34
ZEB1-220ENST00000560909 HMG20BQ9P0W2 317 aa6.66□□□□□ -1.34
ZEB1-220ENST00000560909 PPP1R1BQ9UD71 204 aaPredicted RBP6.66□□□□□ -1.34
ZEB1-220ENST00000560909 A0A1B0GUL6 1792 aa6.65□□□□□ -1.34
ZEB1-220ENST00000560909 C6orf229H3BNL8 230 aa6.65□□□□□ -1.34
ZEB1-220ENST00000560909 PIK3R2O00459 728 aa6.65□□□□□ -1.34
ZEB1-220ENST00000560909 GNB5O14775 395 aa6.65□□□□□ -1.34
ZEB1-220ENST00000560909 CYP2E1P05181 493 aaPredicted RBP6.65□□□□□ -1.34
ZEB1-220ENST00000560909 MX2P20592 715 aa6.65□□□□□ -1.34
ZEB1-220ENST00000560909 KCNJ4P48050 445 aa6.65□□□□□ -1.34
ZEB1-220ENST00000560909 MAP2K5Q13163 448 aa6.65□□□□□ -1.34
ZEB1-220ENST00000560909 TSHZ3Q63HK5 1081 aa6.65□□□□□ -1.34
ZEB1-220ENST00000560909 ZNF804AQ7Z570 1209 aa6.65□□□□□ -1.34
ZEB1-220ENST00000560909 RETREG3Q86VR2 466 aa6.65□□□□□ -1.34
ZEB1-220ENST00000560909 SPATA5Q8NB90 893 aa6.65□□□□□ -1.34
ZEB1-220ENST00000560909 FOXJ1Q92949 421 aa6.65□□□□□ -1.34
ZEB1-220ENST00000560909 EVI5LQ96CN4 794 aa6.65□□□□□ -1.34
ZEB1-220ENST00000560909 GPR101Q96P66 508 aaPredicted RBP6.65□□□□□ -1.34
ZEB1-220ENST00000560909 MRIQ9BWK5 157 aa6.65□□□□□ -1.34
ZEB1-220ENST00000560909 TAOK3Q9H2K8 898 aa6.65□□□□□ -1.34
ZEB1-220ENST00000560909 SNRKQ9NRH2 765 aa6.65□□□□□ -1.34
ZEB1-220ENST00000560909 TPSG1Q9NRR2 321 aa6.65□□□□□ -1.34
ZEB1-220ENST00000560909 DENND2AQ9ULE3 1009 aa6.65□□□□□ -1.34
ZEB1-220ENST00000560909 BCS1LQ9Y276 419 aa6.65□□□□□ -1.34
ZEB1-220ENST00000560909 SUGT1Q9Y2Z0 365 aa6.65□□□□□ -1.34
ZEB1-220ENST00000560909 UTRNP46939 3433 aa6.65□□□□□ -1.35
ZEB1-220ENST00000560909 RFX7Q2KHR2 1363 aa6.65□□□□□ -1.35
ZEB1-220ENST00000560909 COL1A1P02452 1464 aaPredicted RBP6.65□□□□□ -1.35
ZEB1-220ENST00000560909 ARAP2Q8WZ64 1704 aa6.64□□□□□ -1.35
ZEB1-220ENST00000560909 YDJCA8MPS7 323 aa6.64□□□□□ -1.35
ZEB1-220ENST00000560909 FZD9O00144 591 aa6.64□□□□□ -1.35
ZEB1-220ENST00000560909 SDSP20132 328 aa6.64□□□□□ -1.35
ZEB1-220ENST00000560909 FSHRP23945 695 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms