RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 NUDT12Q9BQG2 462 aa12.92□□□□□ -0.34
CDC42BPB-207ENST00000560492 PAGR1Q9BTK6 254 aa12.92□□□□□ -0.34
CDC42BPB-207ENST00000560492 UBE2OQ9C0C9 1292 aaKnown RBP12.92□□□□□ -0.34
CDC42BPB-207ENST00000560492 HMG20BQ9P0W2 317 aa12.92□□□□□ -0.34
CDC42BPB-207ENST00000560492 ZKSCAN1P17029 563 aaPredicted RBP12.91□□□□□ -0.34
CDC42BPB-207ENST00000560492 MAGEA10P43363 369 aaPredicted RBP12.91□□□□□ -0.34
CDC42BPB-207ENST00000560492 TRIB2Q92519 343 aa12.91□□□□□ -0.34
CDC42BPB-207ENST00000560492 NSUN4Q96CB9 384 aaKnown RBP12.91□□□□□ -0.34
CDC42BPB-207ENST00000560492 CDCA7LQ96GN5 454 aa12.91□□□□□ -0.34
CDC42BPB-207ENST00000560492 GDF15Q99988 308 aa12.91□□□□□ -0.34
CDC42BPB-207ENST00000560492 HERC5Q9UII4 1024 aaKnown RBP12.91□□□□□ -0.34
CDC42BPB-207ENST00000560492 MYO5AQ9Y4I1 1855 aaKnown RBP12.91□□□□□ -0.34
CDC42BPB-207ENST00000560492 SIPA1L1O43166 1804 aa12.9□□□□□ -0.34
CDC42BPB-207ENST00000560492 BAG3O95817 575 aa12.9□□□□□ -0.34
CDC42BPB-207ENST00000560492 MAP4K4O95819 1239 aaPredicted RBP12.9□□□□□ -0.34
CDC42BPB-207ENST00000560492 GNAI3P08754 354 aa12.9□□□□□ -0.34
CDC42BPB-207ENST00000560492 BMP8BP34820 402 aa12.9□□□□□ -0.34
CDC42BPB-207ENST00000560492 WDR78Q5VTH9 848 aa12.9□□□□□ -0.34
CDC42BPB-207ENST00000560492 NAA16Q6N069 864 aaPredicted RBP12.9□□□□□ -0.34
CDC42BPB-207ENST00000560492 MAPKAPK5Q8IW41 473 aa12.9□□□□□ -0.34
CDC42BPB-207ENST00000560492 TDHQ8IZJ6 230 aa12.9□□□□□ -0.34
CDC42BPB-207ENST00000560492 GPRC5AQ8NFJ5 357 aa12.9□□□□□ -0.34
CDC42BPB-207ENST00000560492 SH3RF3Q8TEJ3 882 aaPredicted RBP12.9□□□□□ -0.34
CDC42BPB-207ENST00000560492 SOCS4Q8WXH5 440 aa12.9□□□□□ -0.34
CDC42BPB-207ENST00000560492 AATFQ9NY61 560 aaKnown RBP eCLIP12.9□□□□□ -0.34
CDC42BPB-207ENST00000560492 COL2A1P02458 1487 aaPredicted RBP12.9□□□□□ -0.34
CDC42BPB-207ENST00000560492 FRMPD3Q5JV73 1810 aa12.9□□□□□ -0.34
CDC42BPB-207ENST00000560492 FOCADQ5VW36 1801 aa12.9□□□□□ -0.34
CDC42BPB-207ENST00000560492 MYH1P12882 1939 aa12.9□□□□□ -0.35
CDC42BPB-207ENST00000560492 PEX10O60683 326 aa12.89□□□□□ -0.35
CDC42BPB-207ENST00000560492 GDF11O95390 407 aa12.89□□□□□ -0.35
CDC42BPB-207ENST00000560492 ASNSP08243 561 aa12.89□□□□□ -0.35
CDC42BPB-207ENST00000560492 HERVK_113P62684 666 aa12.89□□□□□ -0.35
CDC42BPB-207ENST00000560492 G3BP1Q13283 466 aaKnown RBP eCLIP12.89□□□□□ -0.35
CDC42BPB-207ENST00000560492 OS9Q13438 667 aaPredicted RBP12.89□□□□□ -0.35
CDC42BPB-207ENST00000560492 RRP1BQ14684 758 aaKnown RBP12.89□□□□□ -0.35
CDC42BPB-207ENST00000560492 TTC39AQ5SRH9 613 aa12.89□□□□□ -0.35
CDC42BPB-207ENST00000560492 ZNF384Q8TF68 577 aa12.89□□□□□ -0.35
CDC42BPB-207ENST00000560492 TGFBRAP1Q8WUH2 860 aa12.89□□□□□ -0.35
CDC42BPB-207ENST00000560492 MS4A3Q96HJ5 214 aa12.89□□□□□ -0.35
CDC42BPB-207ENST00000560492 P2RX7Q99572 595 aaKnown RBP12.89□□□□□ -0.35
CDC42BPB-207ENST00000560492 SNRKQ9NRH2 765 aa12.89□□□□□ -0.35
CDC42BPB-207ENST00000560492 PI4KBQ9UBF8 816 aa12.89□□□□□ -0.35
CDC42BPB-207ENST00000560492 GJD2Q9UKL4 321 aa12.89□□□□□ -0.35
CDC42BPB-207ENST00000560492 LAMA3Q16787 3333 aa12.88□□□□□ -0.35
CDC42BPB-207ENST00000560492 USP17L10C9JJH3 530 aa12.88□□□□□ -0.35
CDC42BPB-207ENST00000560492 UQCRFS1P1P0C7P4 283 aa12.88□□□□□ -0.35
CDC42BPB-207ENST00000560492 PLCG2P16885 1265 aa12.88□□□□□ -0.35
CDC42BPB-207ENST00000560492 MAPK4P31152 587 aa12.88□□□□□ -0.35
CDC42BPB-207ENST00000560492 BACE1P56817 501 aa12.88□□□□□ -0.35
CDC42BPB-207ENST00000560492 MDM2Q00987 491 aaPredicted RBP12.88□□□□□ -0.35
CDC42BPB-207ENST00000560492 ZYXQ15942 572 aaKnown RBP12.88□□□□□ -0.35
CDC42BPB-207ENST00000560492 SH3D19Q5HYK7 790 aa12.88□□□□□ -0.35
CDC42BPB-207ENST00000560492 TRMT44Q8IYL2 757 aaKnown RBP12.88□□□□□ -0.35
CDC42BPB-207ENST00000560492 FEZ1Q99689 392 aa12.88□□□□□ -0.35
CDC42BPB-207ENST00000560492 TSPYL2Q9H2G4 693 aaPredicted RBP12.88□□□□□ -0.35
CDC42BPB-207ENST00000560492 DHX36Q9H2U1 1008 aaKnown RBP12.88□□□□□ -0.35
CDC42BPB-207ENST00000560492 MORF4L1Q9UBU8 362 aa12.88□□□□□ -0.35
CDC42BPB-207ENST00000560492 SAP30BPQ9UHR5 308 aaKnown RBP12.88□□□□□ -0.35
CDC42BPB-207ENST00000560492 OGDHLQ9ULD0 1010 aa12.88□□□□□ -0.35
CDC42BPB-207ENST00000560492 HLA-DOAP06340 250 aa12.87□□□□□ -0.35
CDC42BPB-207ENST00000560492 ARID4AP29374 1257 aaPredicted RBP12.87□□□□□ -0.35
CDC42BPB-207ENST00000560492 RGS2P41220 211 aa12.87□□□□□ -0.35
CDC42BPB-207ENST00000560492 MCAMP43121 646 aa12.87□□□□□ -0.35
CDC42BPB-207ENST00000560492 WDR18Q9BV38 432 aa12.87□□□□□ -0.35
CDC42BPB-207ENST00000560492 PFASO15067 1338 aa12.87□□□□□ -0.35
CDC42BPB-207ENST00000560492 C19orf81C9J6K1 198 aa12.86□□□□□ -0.35
CDC42BPB-207ENST00000560492 CT47B1P0C2W7 299 aaPredicted RBP12.86□□□□□ -0.35
CDC42BPB-207ENST00000560492 CNGA1P29973 690 aa12.86□□□□□ -0.35
CDC42BPB-207ENST00000560492 CCND3P30281 292 aaPredicted RBP12.86□□□□□ -0.35
CDC42BPB-207ENST00000560492 ERVK-9P63128 1117 aa12.86□□□□□ -0.35
CDC42BPB-207ENST00000560492 ERVK-24P63145 666 aa12.86□□□□□ -0.35
CDC42BPB-207ENST00000560492 CACNB2Q08289 660 aaPredicted RBP12.86□□□□□ -0.35
CDC42BPB-207ENST00000560492 CCL14Q16627 93 aa12.86□□□□□ -0.35
CDC42BPB-207ENST00000560492 GPR153Q6NV75 609 aa12.86□□□□□ -0.35
CDC42BPB-207ENST00000560492 ATF7IPQ6VMQ6 1270 aa12.86□□□□□ -0.35
CDC42BPB-207ENST00000560492 GPR142Q7Z601 462 aa12.86□□□□□ -0.35
CDC42BPB-207ENST00000560492 PLEKHH3Q7Z736 793 aa12.86□□□□□ -0.35
CDC42BPB-207ENST00000560492 LBHD1Q9BQE6 289 aaPredicted RBP12.86□□□□□ -0.35
CDC42BPB-207ENST00000560492 TXNRD2Q9NNW7 524 aa12.86□□□□□ -0.35
CDC42BPB-207ENST00000560492 PALD1Q9ULE6 856 aa12.86□□□□□ -0.35
CDC42BPB-207ENST00000560492 ZBTB21Q9ULJ3 1066 aa12.86□□□□□ -0.35
CDC42BPB-207ENST00000560492 STXBP5LQ9Y2K9 1186 aa12.86□□□□□ -0.35
CDC42BPB-207ENST00000560492 NDUFB9Q9Y6M9 179 aa12.86□□□□□ -0.35
CDC42BPB-207ENST00000560492 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.86□□□□□ -0.35
CDC42BPB-207ENST00000560492 FLT1P17948 1338 aa12.86□□□□□ -0.35
CDC42BPB-207ENST00000560492 GLRX3O76003 335 aaKnown RBP12.85□□□□□ -0.35
CDC42BPB-207ENST00000560492 GNAI2P04899 355 aa12.85□□□□□ -0.35
CDC42BPB-207ENST00000560492 XRCC5P13010 732 aaKnown RBP12.85□□□□□ -0.35
CDC42BPB-207ENST00000560492 HOXA7P31268 230 aaPredicted RBP12.85□□□□□ -0.35
CDC42BPB-207ENST00000560492 LRRC26Q2I0M4 334 aa12.85□□□□□ -0.35
CDC42BPB-207ENST00000560492 SHROOM1Q2M3G4 852 aaPredicted RBP12.85□□□□□ -0.35
CDC42BPB-207ENST00000560492 LRIT3Q3SXY7 679 aa12.85□□□□□ -0.35
CDC42BPB-207ENST00000560492 CCDC158Q5M9N0 1113 aa12.85□□□□□ -0.35
CDC42BPB-207ENST00000560492 USP17L2Q6R6M4 530 aa12.85□□□□□ -0.35
CDC42BPB-207ENST00000560492 GTF3C2Q8WUA4 911 aaPredicted RBP12.85□□□□□ -0.35
CDC42BPB-207ENST00000560492 FRAT1Q92837 279 aaPredicted RBP12.85□□□□□ -0.35
CDC42BPB-207ENST00000560492 APBA2Q99767 749 aa12.85□□□□□ -0.35
CDC42BPB-207ENST00000560492 PORCNQ9H237 461 aa12.85□□□□□ -0.35
CDC42BPB-207ENST00000560492 PRKAG2Q9UGJ0 569 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms