RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 TATDN1Q6P1N9 297 aa18.52■□□□□ 0.56
LYSMD2-204ENST00000560491 PTPRFP10586 1907 aa18.52■□□□□ 0.56
LYSMD2-204ENST00000560491 ROBO3Q96MS0 1386 aa18.52■□□□□ 0.55
LYSMD2-204ENST00000560491 RAD50Q92878 1312 aa18.51■□□□□ 0.55
LYSMD2-204ENST00000560491 PTPRAP18433 802 aa18.51■□□□□ 0.55
LYSMD2-204ENST00000560491 PPATQ06203 517 aa18.51■□□□□ 0.55
LYSMD2-204ENST00000560491 PPIL2Q13356 520 aa18.51■□□□□ 0.55
LYSMD2-204ENST00000560491 CERKLQ49MI3 558 aaPredicted RBP18.51■□□□□ 0.55
LYSMD2-204ENST00000560491 C16orf86Q6ZW13 317 aa18.51■□□□□ 0.55
LYSMD2-204ENST00000560491 ZBTB21Q9ULJ3 1066 aa18.51■□□□□ 0.55
LYSMD2-204ENST00000560491 ZHX2Q9Y6X8 837 aa18.51■□□□□ 0.55
LYSMD2-204ENST00000560491 IRF6O14896 467 aa18.5■□□□□ 0.55
LYSMD2-204ENST00000560491 FGAP02671 866 aa18.5■□□□□ 0.55
LYSMD2-204ENST00000560491 CDK8P49336 464 aa18.5■□□□□ 0.55
LYSMD2-204ENST00000560491 PPARAQ07869 468 aa18.5■□□□□ 0.55
LYSMD2-204ENST00000560491 RUFY2Q8WXA3 655 aa18.5■□□□□ 0.55
LYSMD2-204ENST00000560491 SWAP70Q9UH65 585 aa18.5■□□□□ 0.55
LYSMD2-204ENST00000560491 SGSM2O43147 1006 aa18.49■□□□□ 0.55
LYSMD2-204ENST00000560491 GH2P01242 217 aa18.49■□□□□ 0.55
LYSMD2-204ENST00000560491 ALX1Q15699 326 aa18.49■□□□□ 0.55
LYSMD2-204ENST00000560491 ABCB5Q2M3G0 1257 aa18.49■□□□□ 0.55
LYSMD2-204ENST00000560491 ZMYM6O95789 1325 aa18.49■□□□□ 0.55
LYSMD2-204ENST00000560491 ASNSP08243 561 aa18.48■□□□□ 0.55
LYSMD2-204ENST00000560491 AKR1B1P15121 316 aa18.48■□□□□ 0.55
LYSMD2-204ENST00000560491 CTDSPL2Q05D32 466 aa18.48■□□□□ 0.55
LYSMD2-204ENST00000560491 MS4A4AQ96JQ5 239 aa18.48■□□□□ 0.55
LYSMD2-204ENST00000560491 GREB1LQ9C091 1923 aaPredicted RBP18.47■□□□□ 0.55
LYSMD2-204ENST00000560491 MANSC4A6NHS7 340 aaPredicted RBP18.47■□□□□ 0.55
LYSMD2-204ENST00000560491 USP17L5A8MUK1 530 aa18.47■□□□□ 0.55
LYSMD2-204ENST00000560491 MPHOSPH10O00566 681 aaKnown RBP18.47■□□□□ 0.55
LYSMD2-204ENST00000560491 CDC45O75419 566 aa18.47■□□□□ 0.55
LYSMD2-204ENST00000560491 PRDM1O75626 825 aa18.47■□□□□ 0.55
LYSMD2-204ENST00000560491 HAND2P61296 217 aa18.47■□□□□ 0.55
LYSMD2-204ENST00000560491 RAB3GAP1Q15042 981 aa18.47■□□□□ 0.55
LYSMD2-204ENST00000560491 ESYT1Q9BSJ8 1104 aa18.47■□□□□ 0.55
LYSMD2-204ENST00000560491 DSCC1Q9BVC3 393 aa18.47■□□□□ 0.55
LYSMD2-204ENST00000560491 AFG3L2Q9Y4W6 797 aa18.47■□□□□ 0.55
LYSMD2-204ENST00000560491 CCL15-CCL14A0A0B4J2E2 113 aa18.46■□□□□ 0.55
LYSMD2-204ENST00000560491 TRIM75PA6NK02 468 aa18.46■□□□□ 0.55
LYSMD2-204ENST00000560491 GUCY1A2P33402 732 aa18.46■□□□□ 0.55
LYSMD2-204ENST00000560491 GTF2A2P52657 109 aa18.46■□□□□ 0.55
LYSMD2-204ENST00000560491 MAP2K1Q02750 393 aaPredicted RBP18.46■□□□□ 0.55
LYSMD2-204ENST00000560491 PTH1RQ03431 593 aa18.46■□□□□ 0.55
LYSMD2-204ENST00000560491 SREBF2Q12772 1141 aa18.46■□□□□ 0.55
LYSMD2-204ENST00000560491 SNAPC2Q13487 334 aa18.46■□□□□ 0.55
LYSMD2-204ENST00000560491 CCL15Q16663 113 aa18.46■□□□□ 0.55
LYSMD2-204ENST00000560491 BRI3BPQ8WY22 251 aa18.46■□□□□ 0.55
LYSMD2-204ENST00000560491 CABP5Q9NP86 173 aa18.46■□□□□ 0.55
LYSMD2-204ENST00000560491 INCENPQ9NQS7 918 aa18.46■□□□□ 0.55
LYSMD2-204ENST00000560491 GINM1Q9NU53 330 aa18.46■□□□□ 0.55
LYSMD2-204ENST00000560491 TAOK2Q9UL54 1235 aa18.46■□□□□ 0.55
LYSMD2-204ENST00000560491 KCNH4Q9UQ05 1017 aa18.46■□□□□ 0.55
LYSMD2-204ENST00000560491 TACC3Q9Y6A5 838 aa18.46■□□□□ 0.55
LYSMD2-204ENST00000560491 LOC285556D6RIA3 1793 aa18.45■□□□□ 0.54
LYSMD2-204ENST00000560491 RASA1P20936 1047 aa18.45■□□□□ 0.54
LYSMD2-204ENST00000560491 TM4SF4P48230 202 aa18.45■□□□□ 0.54
LYSMD2-204ENST00000560491 SEPT2Q15019 361 aa18.45■□□□□ 0.54
LYSMD2-204ENST00000560491 CLEC10AQ8IUN9 316 aa18.45■□□□□ 0.54
LYSMD2-204ENST00000560491 ZNF280CQ8ND82 737 aa18.45■□□□□ 0.54
LYSMD2-204ENST00000560491 NBPF3Q9H094 633 aa18.45■□□□□ 0.54
LYSMD2-204ENST00000560491 MKNK2Q9HBH9 465 aa18.45■□□□□ 0.54
LYSMD2-204ENST00000560491 WBP1LQ9NX94 342 aa18.45■□□□□ 0.54
LYSMD2-204ENST00000560491 ANAPC4Q9UJX5 808 aa18.45■□□□□ 0.54
LYSMD2-204ENST00000560491 TESPA1A2RU30 521 aaPredicted RBP18.44■□□□□ 0.54
LYSMD2-204ENST00000560491 IGF2BP3O00425 579 aaKnown RBP eCLIP18.44■□□□□ 0.54
LYSMD2-204ENST00000560491 CXCL11O14625 94 aa18.44■□□□□ 0.54
LYSMD2-204ENST00000560491 SLC3A2P08195 630 aaKnown RBP18.44■□□□□ 0.54
LYSMD2-204ENST00000560491 HSPA1AP0DMV8 641 aaKnown RBP18.44■□□□□ 0.54
LYSMD2-204ENST00000560491 HSPA1BP0DMV9 641 aaKnown RBP18.44■□□□□ 0.54
LYSMD2-204ENST00000560491 PDE4BQ07343 736 aa18.44■□□□□ 0.54
LYSMD2-204ENST00000560491 SPP2Q13103 211 aa18.44■□□□□ 0.54
LYSMD2-204ENST00000560491 DGKZQ13574 1117 aa18.44■□□□□ 0.54
LYSMD2-204ENST00000560491 IFNL1Q8IU54 200 aa18.44■□□□□ 0.54
LYSMD2-204ENST00000560491 REM2Q8IYK8 340 aaPredicted RBP18.44■□□□□ 0.54
LYSMD2-204ENST00000560491 PTPN18Q99952 460 aa18.44■□□□□ 0.54
LYSMD2-204ENST00000560491 AS3MTQ9HBK9 375 aa18.44■□□□□ 0.54
LYSMD2-204ENST00000560491 A0A0G2JLL6 359 aaPredicted RBP18.43■□□□□ 0.54
LYSMD2-204ENST00000560491 CETPP11597 493 aa18.43■□□□□ 0.54
LYSMD2-204ENST00000560491 MOGSQ13724 837 aa18.43■□□□□ 0.54
LYSMD2-204ENST00000560491 CASC1Q6TDU7 716 aa18.43■□□□□ 0.54
LYSMD2-204ENST00000560491 TMEM179Q6ZVK1 233 aa18.43■□□□□ 0.54
LYSMD2-204ENST00000560491 PRRT2Q7Z6L0 340 aaPredicted RBP18.43■□□□□ 0.54
LYSMD2-204ENST00000560491 TBC1D10CQ8IV04 446 aa18.43■□□□□ 0.54
LYSMD2-204ENST00000560491 CCDC17Q96LX7 622 aa18.43■□□□□ 0.54
LYSMD2-204ENST00000560491 WDR18Q9BV38 432 aa18.43■□□□□ 0.54
LYSMD2-204ENST00000560491 TBC1D2Q9BYX2 928 aa18.43■□□□□ 0.54
LYSMD2-204ENST00000560491 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.43■□□□□ 0.54
LYSMD2-204ENST00000560491 GTF3C3Q9Y5Q9 886 aa18.43■□□□□ 0.54
LYSMD2-204ENST00000560491 INHBEP58166 350 aa18.42■□□□□ 0.54
LYSMD2-204ENST00000560491 MTMR2Q13614 643 aa18.42■□□□□ 0.54
LYSMD2-204ENST00000560491 FAM43AQ8N2R8 423 aa18.42■□□□□ 0.54
LYSMD2-204ENST00000560491 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.42■□□□□ 0.54
LYSMD2-204ENST00000560491 LSG1Q9H089 658 aaKnown RBP18.42■□□□□ 0.54
LYSMD2-204ENST00000560491 ZNF287Q9HBT7 754 aa18.42■□□□□ 0.54
LYSMD2-204ENST00000560491 RNF186Q9NXI6 227 aa18.42■□□□□ 0.54
LYSMD2-204ENST00000560491 TSKSQ9UJT2 592 aa18.42■□□□□ 0.54
LYSMD2-204ENST00000560491 BTBD19C9JJ37 291 aa18.41■□□□□ 0.54
LYSMD2-204ENST00000560491 ZNF213O14771 459 aa18.41■□□□□ 0.54
LYSMD2-204ENST00000560491 TRPA1O75762 1119 aa18.41■□□□□ 0.54
LYSMD2-204ENST00000560491 HMGCS2P54868 508 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms