RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 MVPQ14764 893 aaKnown RBP20.53■□□□□ 0.88
HERC1-207ENST00000560316 MORN1Q5T089 497 aa20.53■□□□□ 0.88
HERC1-207ENST00000560316 FAM109BQ6ICB4 259 aaPredicted RBP20.53■□□□□ 0.88
HERC1-207ENST00000560316 GPR142Q7Z601 462 aa20.53■□□□□ 0.88
HERC1-207ENST00000560316 RAI14Q9P0K7 980 aa20.53■□□□□ 0.88
HERC1-207ENST00000560316 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.53■□□□□ 0.88
HERC1-207ENST00000560316 ERVK-9P63128 1117 aa20.52■□□□□ 0.88
HERC1-207ENST00000560316 ERVK-24P63145 666 aa20.52■□□□□ 0.88
HERC1-207ENST00000560316 CCAR1Q8IX12 1150 aaKnown RBP20.52■□□□□ 0.88
HERC1-207ENST00000560316 SPATA5Q8NB90 893 aa20.52■□□□□ 0.88
HERC1-207ENST00000560316 SH3RF3Q8TEJ3 882 aaPredicted RBP20.52■□□□□ 0.88
HERC1-207ENST00000560316 NEUROD6Q96NK8 337 aa20.52■□□□□ 0.88
HERC1-207ENST00000560316 PAGR1Q9BTK6 254 aa20.52■□□□□ 0.88
HERC1-207ENST00000560316 SENP6Q9GZR1 1112 aaPredicted RBP20.52■□□□□ 0.88
HERC1-207ENST00000560316 PI4KBQ9UBF8 816 aa20.52■□□□□ 0.88
HERC1-207ENST00000560316 AKAP2Q9Y2D5 859 aa20.52■□□□□ 0.88
HERC1-207ENST00000560316 POTEEQ6S8J3 1075 aa20.51■□□□□ 0.87
HERC1-207ENST00000560316 PLEKHH3Q7Z736 793 aa20.51■□□□□ 0.87
HERC1-207ENST00000560316 APBA2Q99767 749 aa20.51■□□□□ 0.87
HERC1-207ENST00000560316 LBHD1Q9BQE6 289 aaPredicted RBP20.51■□□□□ 0.87
HERC1-207ENST00000560316 SMC4Q9NTJ3 1288 aa20.51■□□□□ 0.87
HERC1-207ENST00000560316 VCANP13611 3396 aa20.51■□□□□ 0.87
HERC1-207ENST00000560316 USP17L10C9JJH3 530 aa20.5■□□□□ 0.87
HERC1-207ENST00000560316 GDF11O95390 407 aa20.5■□□□□ 0.87
HERC1-207ENST00000560316 ASNSP08243 561 aa20.5■□□□□ 0.87
HERC1-207ENST00000560316 DNAJC18Q9H819 358 aa20.5■□□□□ 0.87
HERC1-207ENST00000560316 SIPA1L1O43166 1804 aa20.5■□□□□ 0.87
HERC1-207ENST00000560316 EYSQ5T1H1 3165 aa20.5■□□□□ 0.87
HERC1-207ENST00000560316 C19orf81C9J6K1 198 aa20.49■□□□□ 0.87
HERC1-207ENST00000560316 ATN1P54259 1190 aaPredicted RBP20.49■□□□□ 0.87
HERC1-207ENST00000560316 ALDH1L2Q3SY69 923 aa20.49■□□□□ 0.87
HERC1-207ENST00000560316 ZNF697Q5TEC3 545 aa20.49■□□□□ 0.87
HERC1-207ENST00000560316 MEIS3Q99687 375 aa20.49■□□□□ 0.87
HERC1-207ENST00000560316 NDUFB9Q9Y6M9 179 aa20.49■□□□□ 0.87
HERC1-207ENST00000560316 E9PSI1 815 aa20.48■□□□□ 0.87
HERC1-207ENST00000560316 GORABQ5T7V8 394 aa20.48■□□□□ 0.87
HERC1-207ENST00000560316 DHX36Q9H2U1 1008 aaKnown RBP20.48■□□□□ 0.87
HERC1-207ENST00000560316 CWC22Q9HCG8 908 aaKnown RBP20.48■□□□□ 0.87
HERC1-207ENST00000560316 AATFQ9NY61 560 aaKnown RBP eCLIP20.48■□□□□ 0.87
HERC1-207ENST00000560316 FLRT1Q9NZU1 646 aa20.48■□□□□ 0.87
HERC1-207ENST00000560316 MAP2K5Q13163 448 aa20.47■□□□□ 0.87
HERC1-207ENST00000560316 MAPKAPK5Q8IW41 473 aa20.47■□□□□ 0.87
HERC1-207ENST00000560316 TGFBRAP1Q8WUH2 860 aa20.47■□□□□ 0.87
HERC1-207ENST00000560316 NOL10Q9BSC4 688 aaKnown RBP20.47■□□□□ 0.87
HERC1-207ENST00000560316 EMILIN3Q9NT22 766 aa20.47■□□□□ 0.87
HERC1-207ENST00000560316 LRP2BPQ9P2M1 347 aa20.47■□□□□ 0.87
HERC1-207ENST00000560316 NOB1Q9ULX3 412 aaKnown RBP20.47■□□□□ 0.87
HERC1-207ENST00000560316 HDAC5Q9UQL6 1122 aa20.47■□□□□ 0.87
HERC1-207ENST00000560316 FRMPD3Q5JV73 1810 aa20.46■□□□□ 0.87
HERC1-207ENST00000560316 SRGAP3O43295 1099 aa20.46■□□□□ 0.87
HERC1-207ENST00000560316 ARID4AP29374 1257 aaPredicted RBP20.46■□□□□ 0.87
HERC1-207ENST00000560316 MCAMP43121 646 aa20.46■□□□□ 0.87
HERC1-207ENST00000560316 CRACR2BQ8N4Y2 399 aaPredicted RBP20.46■□□□□ 0.87
HERC1-207ENST00000560316 GTF3C2Q8WUA4 911 aaPredicted RBP20.46■□□□□ 0.87
HERC1-207ENST00000560316 EDC3Q96F86 508 aaKnown RBP20.46■□□□□ 0.87
HERC1-207ENST00000560316 CDX2Q99626 313 aaPredicted RBP20.46■□□□□ 0.87
HERC1-207ENST00000560316 TRIM34Q9BYJ4 488 aa20.46■□□□□ 0.87
HERC1-207ENST00000560316 ZBTB21Q9ULJ3 1066 aa20.46■□□□□ 0.87
HERC1-207ENST00000560316 MAST2Q6P0Q8 1798 aa20.46■□□□□ 0.87
HERC1-207ENST00000560316 CNMDO75829 334 aa20.45■□□□□ 0.86
HERC1-207ENST00000560316 CNGA1P29973 690 aa20.45■□□□□ 0.86
HERC1-207ENST00000560316 SLFN5Q08AF3 891 aa20.45■□□□□ 0.86
HERC1-207ENST00000560316 WDR78Q5VTH9 848 aa20.45■□□□□ 0.86
HERC1-207ENST00000560316 MFSD14CQ5VZR4 134 aa20.45■□□□□ 0.86
HERC1-207ENST00000560316 METTL16Q86W50 562 aaKnown RBP20.45■□□□□ 0.86
HERC1-207ENST00000560316 DDX20Q9UHI6 824 aaKnown RBP20.45■□□□□ 0.86
HERC1-207ENST00000560316 PALD1Q9ULE6 856 aa20.45■□□□□ 0.86
HERC1-207ENST00000560316 FLT1P17948 1338 aa20.45■□□□□ 0.86
HERC1-207ENST00000560316 SPTBN5Q9NRC6 3674 aaKnown RBP20.45■□□□□ 0.86
HERC1-207ENST00000560316 RTP1P59025 263 aa20.44■□□□□ 0.86
HERC1-207ENST00000560316 NAA16Q6N069 864 aaPredicted RBP20.44■□□□□ 0.86
HERC1-207ENST00000560316 USP17L2Q6R6M4 530 aa20.44■□□□□ 0.86
HERC1-207ENST00000560316 FOXP4Q8IVH2 680 aaPredicted RBP20.44■□□□□ 0.86
HERC1-207ENST00000560316 PRKAG2Q9UGJ0 569 aa20.44■□□□□ 0.86
HERC1-207ENST00000560316 PRUNE2Q8WUY3 3088 aa20.44■□□□□ 0.86
HERC1-207ENST00000560316 BAG3O95817 575 aa20.43■□□□□ 0.86
HERC1-207ENST00000560316 SHHQ15465 462 aa20.43■□□□□ 0.86
HERC1-207ENST00000560316 ZYXQ15942 572 aaKnown RBP20.43■□□□□ 0.86
HERC1-207ENST00000560316 ADGRA1Q86SQ6 560 aa20.43■□□□□ 0.86
HERC1-207ENST00000560316 MAFAQ8NHW3 353 aaPredicted RBP20.43■□□□□ 0.86
HERC1-207ENST00000560316 LPAR1Q92633 364 aa20.43■□□□□ 0.86
HERC1-207ENST00000560316 SEMA6BQ9H3T3 888 aa20.43■□□□□ 0.86
HERC1-207ENST00000560316 SNRKQ9NRH2 765 aa20.43■□□□□ 0.86
HERC1-207ENST00000560316 GINM1Q9NU53 330 aa20.43■□□□□ 0.86
HERC1-207ENST00000560316 SAP30BPQ9UHR5 308 aaKnown RBP20.43■□□□□ 0.86
HERC1-207ENST00000560316 RABGAP1Q9Y3P9 1069 aa20.43■□□□□ 0.86
HERC1-207ENST00000560316 PLCG2P16885 1265 aa20.42■□□□□ 0.86
HERC1-207ENST00000560316 C9orf50Q5SZB4 431 aa20.42■□□□□ 0.86
HERC1-207ENST00000560316 TRPV1Q8NER1 839 aa20.42■□□□□ 0.86
HERC1-207ENST00000560316 NPLOC4Q8TAT6 608 aa20.42■□□□□ 0.86
HERC1-207ENST00000560316 CDCA7LQ96GN5 454 aa20.42■□□□□ 0.86
HERC1-207ENST00000560316 API5Q9BZZ5 524 aaKnown RBP20.42■□□□□ 0.86
HERC1-207ENST00000560316 ATP11BQ9Y2G3 1177 aa20.42■□□□□ 0.86
HERC1-207ENST00000560316 SLC15A5A6NIM6 579 aa20.41■□□□□ 0.86
HERC1-207ENST00000560316 DNM1LO00429 736 aa20.41■□□□□ 0.86
HERC1-207ENST00000560316 GLRX3O76003 335 aaKnown RBP20.41■□□□□ 0.86
HERC1-207ENST00000560316 GH2P01242 217 aa20.41■□□□□ 0.86
HERC1-207ENST00000560316 PTPREP23469 700 aa20.41■□□□□ 0.86
HERC1-207ENST00000560316 CYP2C19P33261 490 aa20.41■□□□□ 0.86
HERC1-207ENST00000560316 PPP4CP60510 307 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms