RNA–Protein interactions for RNA: ENST00000560314.1

LINC02253-202, Transcript of long intergenic non-protein coding RNA 2253, humanhuman

TSL 5 BASIC

Gene LINC02253, Length 565 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02253-202ENST00000560314 LAMA3Q16787 3333 aa13.68□□□□□ -0.22
LINC02253-202ENST00000560314 POLA2Q14181 598 aa13.67□□□□□ -0.22
LINC02253-202ENST00000560314 RRP1BQ14684 758 aaKnown RBP13.67□□□□□ -0.22
LINC02253-202ENST00000560314 FOXP4Q8IVH2 680 aaPredicted RBP13.67□□□□□ -0.22
LINC02253-202ENST00000560314 CRACR2BQ8N4Y2 399 aaPredicted RBP13.67□□□□□ -0.22
LINC02253-202ENST00000560314 FRAT1Q92837 279 aaPredicted RBP13.67□□□□□ -0.22
LINC02253-202ENST00000560314 HMX1Q9NP08 348 aaPredicted RBP13.67□□□□□ -0.22
LINC02253-202ENST00000560314 GJD2Q9UKL4 321 aa13.67□□□□□ -0.22
LINC02253-202ENST00000560314 USP17L10C9JJH3 530 aa13.66□□□□□ -0.22
LINC02253-202ENST00000560314 HLA-DOAP06340 250 aa13.66□□□□□ -0.22
LINC02253-202ENST00000560314 XRCC5P13010 732 aaKnown RBP13.66□□□□□ -0.22
LINC02253-202ENST00000560314 OS9Q13438 667 aaPredicted RBP13.66□□□□□ -0.22
LINC02253-202ENST00000560314 TMED8Q6PL24 325 aaPredicted RBP13.66□□□□□ -0.22
LINC02253-202ENST00000560314 TRMT44Q8IYL2 757 aaKnown RBP13.66□□□□□ -0.22
LINC02253-202ENST00000560314 SSH3Q8TE77 659 aa13.66□□□□□ -0.22
LINC02253-202ENST00000560314 TGFBRAP1Q8WUH2 860 aa13.66□□□□□ -0.22
LINC02253-202ENST00000560314 CLUAP1Q96AJ1 413 aa13.66□□□□□ -0.22
LINC02253-202ENST00000560314 PAWRQ96IZ0 340 aaKnown RBP13.66□□□□□ -0.22
LINC02253-202ENST00000560314 NUDT12Q9BQG2 462 aa13.66□□□□□ -0.22
LINC02253-202ENST00000560314 DBNDD2Q9BQY9 259 aa13.66□□□□□ -0.22
LINC02253-202ENST00000560314 DNAJC18Q9H819 358 aa13.66□□□□□ -0.22
LINC02253-202ENST00000560314 BCAR3O75815 825 aa13.65□□□□□ -0.22
LINC02253-202ENST00000560314 CYP2E1P05181 493 aaPredicted RBP13.65□□□□□ -0.22
LINC02253-202ENST00000560314 MAPK4P31152 587 aa13.65□□□□□ -0.22
LINC02253-202ENST00000560314 HERVK_113P62684 666 aa13.65□□□□□ -0.22
LINC02253-202ENST00000560314 PDE3AQ14432 1141 aa13.65□□□□□ -0.22
LINC02253-202ENST00000560314 MAP3K21Q5TCX8 1036 aa13.65□□□□□ -0.22
LINC02253-202ENST00000560314 ZKSCAN2Q63HK3 967 aa13.65□□□□□ -0.22
LINC02253-202ENST00000560314 MAPKAPK5Q8IW41 473 aa13.65□□□□□ -0.22
LINC02253-202ENST00000560314 GPRC5AQ8NFJ5 357 aa13.65□□□□□ -0.22
LINC02253-202ENST00000560314 TRIB2Q92519 343 aa13.65□□□□□ -0.22
LINC02253-202ENST00000560314 NBPF3Q9H094 633 aa13.65□□□□□ -0.22
LINC02253-202ENST00000560314 ZBTB21Q9ULJ3 1066 aa13.65□□□□□ -0.22
LINC02253-202ENST00000560314 ADGRA1Q86SQ6 560 aa13.64□□□□□ -0.23
LINC02253-202ENST00000560314 TMEM57Q8N5G2 664 aa13.64□□□□□ -0.23
LINC02253-202ENST00000560314 DIS3LQ8TF46 1054 aaKnown RBP13.64□□□□□ -0.23
LINC02253-202ENST00000560314 SNRKQ9NRH2 765 aa13.64□□□□□ -0.23
LINC02253-202ENST00000560314 TNNQ9UQP3 1299 aa13.64□□□□□ -0.23
LINC02253-202ENST00000560314 FRMPD3Q5JV73 1810 aa13.64□□□□□ -0.23
LINC02253-202ENST00000560314 SURF6O75683 361 aaKnown RBP13.63□□□□□ -0.23
LINC02253-202ENST00000560314 PRKAR2AP13861 404 aaKnown RBP13.63□□□□□ -0.23
LINC02253-202ENST00000560314 BMP8BP34820 402 aa13.63□□□□□ -0.23
LINC02253-202ENST00000560314 ATP8B2P98198 1209 aa13.63□□□□□ -0.23
LINC02253-202ENST00000560314 USP17L2Q6R6M4 530 aa13.63□□□□□ -0.23
LINC02253-202ENST00000560314 EHD4Q9H223 541 aa13.63□□□□□ -0.23
LINC02253-202ENST00000560314 DBNLQ9UJU6 430 aaKnown RBP13.63□□□□□ -0.23
LINC02253-202ENST00000560314 OGDHLQ9ULD0 1010 aa13.63□□□□□ -0.23
LINC02253-202ENST00000560314 PALD1Q9ULE6 856 aa13.63□□□□□ -0.23
LINC02253-202ENST00000560314 NOP58Q9Y2X3 529 aaKnown RBP13.63□□□□□ -0.23
LINC02253-202ENST00000560314 NAV1Q8NEY1 1877 aa13.62□□□□□ -0.23
LINC02253-202ENST00000560314 GDF11O95390 407 aa13.62□□□□□ -0.23
LINC02253-202ENST00000560314 ZKSCAN1P17029 563 aaPredicted RBP13.62□□□□□ -0.23
LINC02253-202ENST00000560314 ZAP70P43403 619 aa13.62□□□□□ -0.23
LINC02253-202ENST00000560314 ERVK-9P63128 1117 aa13.62□□□□□ -0.23
LINC02253-202ENST00000560314 ERVK-24P63145 666 aa13.62□□□□□ -0.23
LINC02253-202ENST00000560314 GPR153Q6NV75 609 aa13.62□□□□□ -0.23
LINC02253-202ENST00000560314 CCAR1Q8IX12 1150 aaKnown RBP13.62□□□□□ -0.23
LINC02253-202ENST00000560314 FTSJ3Q8IY81 847 aaKnown RBP13.62□□□□□ -0.23
LINC02253-202ENST00000560314 C12orf42Q96LP6 360 aa13.62□□□□□ -0.23
LINC02253-202ENST00000560314 P2RX7Q99572 595 aaKnown RBP13.62□□□□□ -0.23
LINC02253-202ENST00000560314 APBA2Q99767 749 aa13.62□□□□□ -0.23
LINC02253-202ENST00000560314 GDF15Q99988 308 aa13.62□□□□□ -0.23
LINC02253-202ENST00000560314 C11orf49Q9H6J7 331 aa13.62□□□□□ -0.23
LINC02253-202ENST00000560314 TXNRD2Q9NNW7 524 aa13.62□□□□□ -0.23
LINC02253-202ENST00000560314 CYP2B6P20813 491 aa13.61□□□□□ -0.23
LINC02253-202ENST00000560314 CYP7A1P22680 504 aa13.61□□□□□ -0.23
LINC02253-202ENST00000560314 RGS2P41220 211 aa13.61□□□□□ -0.23
LINC02253-202ENST00000560314 MNX1P50219 401 aaPredicted RBP13.61□□□□□ -0.23
LINC02253-202ENST00000560314 USP14P54578 494 aa13.61□□□□□ -0.23
LINC02253-202ENST00000560314 CCNA1P78396 465 aa13.61□□□□□ -0.23
LINC02253-202ENST00000560314 GPR142Q7Z601 462 aa13.61□□□□□ -0.23
LINC02253-202ENST00000560314 C7orf61Q8IZ16 206 aa13.61□□□□□ -0.23
LINC02253-202ENST00000560314 PIH1D3Q9NQM4 214 aaKnown RBP13.61□□□□□ -0.23
LINC02253-202ENST00000560314 STAP2Q9UGK3 403 aa13.61□□□□□ -0.23
LINC02253-202ENST00000560314 SERPINB13Q9UIV8 391 aa13.61□□□□□ -0.23
LINC02253-202ENST00000560314 IDH1O75874 414 aaKnown RBP13.6□□□□□ -0.23
LINC02253-202ENST00000560314 GH2P01242 217 aa13.6□□□□□ -0.23
LINC02253-202ENST00000560314 USP5P45974 858 aa13.6□□□□□ -0.23
LINC02253-202ENST00000560314 JAG1P78504 1218 aa13.6□□□□□ -0.23
LINC02253-202ENST00000560314 TRIM32Q13049 653 aa13.6□□□□□ -0.23
LINC02253-202ENST00000560314 TATDN1Q6P1N9 297 aa13.6□□□□□ -0.23
LINC02253-202ENST00000560314 PLEKHH3Q7Z736 793 aa13.6□□□□□ -0.23
LINC02253-202ENST00000560314 USP6NLQ92738 828 aa13.6□□□□□ -0.23
LINC02253-202ENST00000560314 FEZ1Q99689 392 aa13.6□□□□□ -0.23
LINC02253-202ENST00000560314 RBPJLQ9UBG7 517 aa13.6□□□□□ -0.23
LINC02253-202ENST00000560314 SAP30BPQ9UHR5 308 aaKnown RBP13.6□□□□□ -0.23
LINC02253-202ENST00000560314 RABGAP1Q9Y3P9 1069 aa13.6□□□□□ -0.23
LINC02253-202ENST00000560314 ZNF236Q9UL36 1845 aa13.6□□□□□ -0.23
LINC02253-202ENST00000560314 MYH8P13535 1937 aa13.59□□□□□ -0.23
LINC02253-202ENST00000560314 USP17L15C9J2P7 530 aa13.59□□□□□ -0.23
LINC02253-202ENST00000560314 USP17L13C9JLJ4 530 aa13.59□□□□□ -0.23
LINC02253-202ENST00000560314 USP17L11C9JVI0 530 aa13.59□□□□□ -0.23
LINC02253-202ENST00000560314 USP17L18D6R9N7 530 aa13.59□□□□□ -0.23
LINC02253-202ENST00000560314 USP17L22D6RA61 530 aa13.59□□□□□ -0.23
LINC02253-202ENST00000560314 USP17L17D6RBQ6 530 aa13.59□□□□□ -0.23
LINC02253-202ENST00000560314 USP17L19D6RCP7 530 aa13.59□□□□□ -0.23
LINC02253-202ENST00000560314 USP17L20D6RJB6 530 aa13.59□□□□□ -0.23
LINC02253-202ENST00000560314 GLRX3O76003 335 aaKnown RBP13.59□□□□□ -0.23
LINC02253-202ENST00000560314 USP17L24Q0WX57 530 aa13.59□□□□□ -0.23
LINC02253-202ENST00000560314 MAP3K12Q12852 859 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms