RNA–Protein interactions for RNA: ENST00000559827.1

LINS1-206, Transcript of lines homolog 1, humanhuman

TSL 4

Gene LINS1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-206ENST00000559827 PPIL2Q13356 520 aa23.4■■□□□ 1.34
LINS1-206ENST00000559827 JMYQ8N9B5 988 aa23.4■■□□□ 1.34
LINS1-206ENST00000559827 SLC44A5Q8NCS7 719 aa23.4■■□□□ 1.34
LINS1-206ENST00000559827 PICK1Q9NRD5 415 aa23.4■■□□□ 1.34
LINS1-206ENST00000559827 MINDY4BA8MYZ0 360 aa23.39■■□□□ 1.33
LINS1-206ENST00000559827 CDK8P49336 464 aa23.39■■□□□ 1.33
LINS1-206ENST00000559827 CNKSR2Q8WXI2 1034 aa23.39■■□□□ 1.33
LINS1-206ENST00000559827 ESYT1Q9BSJ8 1104 aa23.39■■□□□ 1.33
LINS1-206ENST00000559827 ZBTB21Q9ULJ3 1066 aa23.39■■□□□ 1.33
LINS1-206ENST00000559827 AOC2O75106 756 aa23.38■■□□□ 1.33
LINS1-206ENST00000559827 JAG1P78504 1218 aa23.38■■□□□ 1.33
LINS1-206ENST00000559827 GRM1Q13255 1194 aa23.38■■□□□ 1.33
LINS1-206ENST00000559827 CERKLQ49MI3 558 aaPredicted RBP23.38■■□□□ 1.33
LINS1-206ENST00000559827 IFFO2Q5TF58 517 aa23.38■■□□□ 1.33
LINS1-206ENST00000559827 OTUD5Q96G74 571 aa23.38■■□□□ 1.33
LINS1-206ENST00000559827 TBC1D2Q9BYX2 928 aa23.38■■□□□ 1.33
LINS1-206ENST00000559827 GDF11O95390 407 aa23.37■■□□□ 1.33
LINS1-206ENST00000559827 CASC1Q6TDU7 716 aa23.37■■□□□ 1.33
LINS1-206ENST00000559827 REM2Q8IYK8 340 aaPredicted RBP23.37■■□□□ 1.33
LINS1-206ENST00000559827 CCDC17Q96LX7 622 aa23.37■■□□□ 1.33
LINS1-206ENST00000559827 ZIC5Q96T25 663 aa23.37■■□□□ 1.33
LINS1-206ENST00000559827 KCNH4Q9UQ05 1017 aa23.37■■□□□ 1.33
LINS1-206ENST00000559827 IRF6O14896 467 aa23.36■■□□□ 1.33
LINS1-206ENST00000559827 SLC3A2P08195 630 aaKnown RBP23.36■■□□□ 1.33
LINS1-206ENST00000559827 SHROOM1Q2M3G4 852 aaPredicted RBP23.36■■□□□ 1.33
LINS1-206ENST00000559827 ZNF287Q9HBT7 754 aa23.36■■□□□ 1.33
LINS1-206ENST00000559827 MANSC4A6NHS7 340 aaPredicted RBP23.35■■□□□ 1.33
LINS1-206ENST00000559827 GH2P01242 217 aa23.35■■□□□ 1.33
LINS1-206ENST00000559827 FGRP09769 529 aa23.35■■□□□ 1.33
LINS1-206ENST00000559827 KIF23Q02241 960 aaPredicted RBP23.35■■□□□ 1.33
LINS1-206ENST00000559827 ABCB5Q2M3G0 1257 aa23.35■■□□□ 1.33
LINS1-206ENST00000559827 MS4A4AQ96JQ5 239 aa23.35■■□□□ 1.33
LINS1-206ENST00000559827 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.35■■□□□ 1.33
LINS1-206ENST00000559827 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.35■■□□□ 1.33
LINS1-206ENST00000559827 AFG3L2Q9Y4W6 797 aa23.35■■□□□ 1.33
LINS1-206ENST00000559827 LOC285556D6RIA3 1793 aa23.35■■□□□ 1.33
LINS1-206ENST00000559827 TESPA1A2RU30 521 aaPredicted RBP23.34■■□□□ 1.33
LINS1-206ENST00000559827 USP17L5A8MUK1 530 aa23.34■■□□□ 1.33
LINS1-206ENST00000559827 RASA1P20936 1047 aa23.34■■□□□ 1.33
LINS1-206ENST00000559827 GTF2A2P52657 109 aa23.34■■□□□ 1.33
LINS1-206ENST00000559827 PTH1RQ03431 593 aa23.34■■□□□ 1.33
LINS1-206ENST00000559827 PDE4BQ07343 736 aa23.34■■□□□ 1.33
LINS1-206ENST00000559827 MKRN3Q13064 507 aaKnown RBP23.34■■□□□ 1.33
LINS1-206ENST00000559827 CTNNA3Q9UI47 895 aa23.34■■□□□ 1.33
LINS1-206ENST00000559827 GTF3C3Q9Y5Q9 886 aa23.34■■□□□ 1.33
LINS1-206ENST00000559827 ZHX2Q9Y6X8 837 aa23.34■■□□□ 1.33
LINS1-206ENST00000559827 PLIN4Q96Q06 1357 aa23.33■■□□□ 1.33
LINS1-206ENST00000559827 CXCL11O14625 94 aa23.33■■□□□ 1.33
LINS1-206ENST00000559827 PCP11498 1178 aaKnown RBP23.33■■□□□ 1.33
LINS1-206ENST00000559827 INHBEP58166 350 aa23.33■■□□□ 1.33
LINS1-206ENST00000559827 SREBF2Q12772 1141 aa23.33■■□□□ 1.33
LINS1-206ENST00000559827 TMEM179Q6ZVK1 233 aa23.33■■□□□ 1.33
LINS1-206ENST00000559827 MAP4K1Q92918 833 aa23.33■■□□□ 1.33
LINS1-206ENST00000559827 WDR18Q9BV38 432 aa23.33■■□□□ 1.33
LINS1-206ENST00000559827 NBPF3Q9H094 633 aa23.33■■□□□ 1.33
LINS1-206ENST00000559827 CABP5Q9NP86 173 aa23.33■■□□□ 1.33
LINS1-206ENST00000559827 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.33■■□□□ 1.33
LINS1-206ENST00000559827 ORC4O43929 436 aa23.32■■□□□ 1.32
LINS1-206ENST00000559827 AKR1B1P15121 316 aa23.32■■□□□ 1.32
LINS1-206ENST00000559827 GUCY1A2P33402 732 aa23.32■■□□□ 1.32
LINS1-206ENST00000559827 TM4SF4P48230 202 aa23.32■■□□□ 1.32
LINS1-206ENST00000559827 CTDSPL2Q05D32 466 aa23.32■■□□□ 1.32
LINS1-206ENST00000559827 SNAPC2Q13487 334 aa23.32■■□□□ 1.32
LINS1-206ENST00000559827 CCDC84Q86UT8 332 aaPredicted RBP23.32■■□□□ 1.32
LINS1-206ENST00000559827 LSG1Q9H089 658 aaKnown RBP23.32■■□□□ 1.32
LINS1-206ENST00000559827 MKNK2Q9HBH9 465 aa23.32■■□□□ 1.32
LINS1-206ENST00000559827 AS3MTQ9HBK9 375 aa23.32■■□□□ 1.32
LINS1-206ENST00000559827 U3KPZ7 1027 aaPredicted RBP23.32■■□□□ 1.32
LINS1-206ENST00000559827 MAP2K1Q02750 393 aaPredicted RBP23.31■■□□□ 1.32
LINS1-206ENST00000559827 IMMTQ16891 758 aaKnown RBP23.31■■□□□ 1.32
LINS1-206ENST00000559827 ZNF280CQ8ND82 737 aa23.31■■□□□ 1.32
LINS1-206ENST00000559827 STAG1Q8WVM7 1258 aa23.31■■□□□ 1.32
LINS1-206ENST00000559827 TACC3Q9Y6A5 838 aa23.31■■□□□ 1.32
LINS1-206ENST00000559827 A0A0G2JLL6 359 aaPredicted RBP23.3■■□□□ 1.32
LINS1-206ENST00000559827 ZNF213O14771 459 aa23.3■■□□□ 1.32
LINS1-206ENST00000559827 CETPP11597 493 aa23.3■■□□□ 1.32
LINS1-206ENST00000559827 KIAA1211Q6ZU35 1233 aa23.3■■□□□ 1.32
LINS1-206ENST00000559827 PRRT2Q7Z6L0 340 aaPredicted RBP23.3■■□□□ 1.32
LINS1-206ENST00000559827 TBC1D10CQ8IV04 446 aa23.3■■□□□ 1.32
LINS1-206ENST00000559827 PRDM1O75626 825 aa23.29■■□□□ 1.32
LINS1-206ENST00000559827 HSPA1AP0DMV8 641 aaKnown RBP23.29■■□□□ 1.32
LINS1-206ENST00000559827 HSPA1BP0DMV9 641 aaKnown RBP23.29■■□□□ 1.32
LINS1-206ENST00000559827 NT5C2P49902 561 aa23.29■■□□□ 1.32
LINS1-206ENST00000559827 HAND2P61296 217 aa23.29■■□□□ 1.32
LINS1-206ENST00000559827 MOGSQ13724 837 aa23.29■■□□□ 1.32
LINS1-206ENST00000559827 SEPT2Q15019 361 aa23.29■■□□□ 1.32
LINS1-206ENST00000559827 AKNAD1Q5T1N1 836 aa23.29■■□□□ 1.32
LINS1-206ENST00000559827 STK11IPQ8N1F8 1099 aa23.29■■□□□ 1.32
LINS1-206ENST00000559827 BRI3BPQ8WY22 251 aa23.29■■□□□ 1.32
LINS1-206ENST00000559827 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.29■■□□□ 1.32
LINS1-206ENST00000559827 CCL15-CCL14A0A0B4J2E2 113 aa23.28■■□□□ 1.32
LINS1-206ENST00000559827 MPHOSPH10O00566 681 aaKnown RBP23.28■■□□□ 1.32
LINS1-206ENST00000559827 SPP2Q13103 211 aa23.28■■□□□ 1.32
LINS1-206ENST00000559827 RAB3GAP1Q15042 981 aa23.28■■□□□ 1.32
LINS1-206ENST00000559827 CCL15Q16663 113 aa23.28■■□□□ 1.32
LINS1-206ENST00000559827 SH3D19Q5HYK7 790 aa23.28■■□□□ 1.32
LINS1-206ENST00000559827 ZNF444Q8N0Y2 327 aaPredicted RBP23.28■■□□□ 1.32
LINS1-206ENST00000559827 RNF41Q9H4P4 317 aaPredicted RBP23.28■■□□□ 1.32
LINS1-206ENST00000559827 ANO2Q9NQ90 1003 aa23.28■■□□□ 1.32
LINS1-206ENST00000559827 WBP1LQ9NX94 342 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms