RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 AATFQ9NY61 560 aaKnown RBP eCLIP13.65□□□□□ -0.22
HERC1-204ENST00000559715 RBPJLQ9UBG7 517 aa13.65□□□□□ -0.22
HERC1-204ENST00000559715 PNMA3Q9UL41 463 aa13.65□□□□□ -0.22
HERC1-204ENST00000559715 PRUNE2Q8WUY3 3088 aa13.65□□□□□ -0.22
HERC1-204ENST00000559715 FLT1P17948 1338 aa13.64□□□□□ -0.23
HERC1-204ENST00000559715 FRMPD3Q5JV73 1810 aa13.64□□□□□ -0.23
HERC1-204ENST00000559715 TFRCP02786 760 aaKnown RBP13.64□□□□□ -0.23
HERC1-204ENST00000559715 ATP8B2P98198 1209 aa13.64□□□□□ -0.23
HERC1-204ENST00000559715 G3BP1Q13283 466 aaKnown RBP eCLIP13.64□□□□□ -0.23
HERC1-204ENST00000559715 Q3C1V9 767 aa13.64□□□□□ -0.23
HERC1-204ENST00000559715 TGFBRAP1Q8WUH2 860 aa13.64□□□□□ -0.23
HERC1-204ENST00000559715 TRIB2Q92519 343 aa13.64□□□□□ -0.23
HERC1-204ENST00000559715 GDF15Q99988 308 aa13.64□□□□□ -0.23
HERC1-204ENST00000559715 DHX36Q9H2U1 1008 aaKnown RBP13.64□□□□□ -0.23
HERC1-204ENST00000559715 TLR7Q9NYK1 1049 aaKnown RBP13.64□□□□□ -0.23
HERC1-204ENST00000559715 LRP2BPQ9P2M1 347 aa13.64□□□□□ -0.23
HERC1-204ENST00000559715 DBNLQ9UJU6 430 aaKnown RBP13.64□□□□□ -0.23
HERC1-204ENST00000559715 PALD1Q9ULE6 856 aa13.64□□□□□ -0.23
HERC1-204ENST00000559715 NOP58Q9Y2X3 529 aaKnown RBP13.64□□□□□ -0.23
HERC1-204ENST00000559715 NR2E3Q9Y5X4 410 aa13.64□□□□□ -0.23
HERC1-204ENST00000559715 RLFQ13129 1914 aa13.64□□□□□ -0.23
HERC1-204ENST00000559715 CDH23Q9H251 3354 aa13.63□□□□□ -0.23
HERC1-204ENST00000559715 IPO8O15397 1037 aaKnown RBP13.63□□□□□ -0.23
HERC1-204ENST00000559715 HMGCRP04035 888 aa13.63□□□□□ -0.23
HERC1-204ENST00000559715 ZAP70P43403 619 aa13.63□□□□□ -0.23
HERC1-204ENST00000559715 DYNLL1P63167 89 aaKnown RBP13.63□□□□□ -0.23
HERC1-204ENST00000559715 MTMR2Q13614 643 aa13.63□□□□□ -0.23
HERC1-204ENST00000559715 GORABQ5T7V8 394 aa13.63□□□□□ -0.23
HERC1-204ENST00000559715 NAA16Q6N069 864 aaPredicted RBP13.63□□□□□ -0.23
HERC1-204ENST00000559715 FOXP4Q8IVH2 680 aaPredicted RBP13.63□□□□□ -0.23
HERC1-204ENST00000559715 MAPKAPK5Q8IW41 473 aa13.63□□□□□ -0.23
HERC1-204ENST00000559715 EAF2Q96CJ1 260 aaPredicted RBP13.63□□□□□ -0.23
HERC1-204ENST00000559715 EMILIN3Q9NT22 766 aa13.63□□□□□ -0.23
HERC1-204ENST00000559715 STAP2Q9UGK3 403 aa13.63□□□□□ -0.23
HERC1-204ENST00000559715 RPTORQ8N122 1335 aa13.63□□□□□ -0.23
HERC1-204ENST00000559715 ASNSP08243 561 aa13.62□□□□□ -0.23
HERC1-204ENST00000559715 RLBP1P12271 317 aa13.62□□□□□ -0.23
HERC1-204ENST00000559715 HERVK_113P62684 666 aa13.62□□□□□ -0.23
HERC1-204ENST00000559715 ANKLE1Q8NAG6 615 aa13.62□□□□□ -0.23
HERC1-204ENST00000559715 FRAT1Q92837 279 aaPredicted RBP13.62□□□□□ -0.23
HERC1-204ENST00000559715 OGDHLQ9ULD0 1010 aa13.62□□□□□ -0.23
HERC1-204ENST00000559715 A0A1W2PPC1 479 aa13.61□□□□□ -0.23
HERC1-204ENST00000559715 EVI5O60447 810 aa13.61□□□□□ -0.23
HERC1-204ENST00000559715 GDF11O95390 407 aa13.61□□□□□ -0.23
HERC1-204ENST00000559715 XRCC5P13010 732 aaKnown RBP13.61□□□□□ -0.23
HERC1-204ENST00000559715 PABPC4Q13310 644 aaKnown RBP eCLIP13.61□□□□□ -0.23
HERC1-204ENST00000559715 TATDN1Q6P1N9 297 aa13.61□□□□□ -0.23
HERC1-204ENST00000559715 LRCH3Q96II8 777 aa13.61□□□□□ -0.23
HERC1-204ENST00000559715 PORCNQ9H237 461 aa13.61□□□□□ -0.23
HERC1-204ENST00000559715 C1orf115Q9H7X2 142 aa13.61□□□□□ -0.23
HERC1-204ENST00000559715 TAOK2Q9UL54 1235 aa13.61□□□□□ -0.23
HERC1-204ENST00000559715 ZBTB21Q9ULJ3 1066 aa13.61□□□□□ -0.23
HERC1-204ENST00000559715 PFASO15067 1338 aa13.61□□□□□ -0.23
HERC1-204ENST00000559715 SPTBN5Q9NRC6 3674 aaKnown RBP13.6□□□□□ -0.23
HERC1-204ENST00000559715 C19orf81C9J6K1 198 aa13.6□□□□□ -0.23
HERC1-204ENST00000559715 USP17L10C9JJH3 530 aa13.6□□□□□ -0.23
HERC1-204ENST00000559715 IGSF3O75054 1194 aa13.6□□□□□ -0.23
HERC1-204ENST00000559715 CNMDO75829 334 aa13.6□□□□□ -0.23
HERC1-204ENST00000559715 BAG3O95817 575 aa13.6□□□□□ -0.23
HERC1-204ENST00000559715 IGHA2P01877 340 aa13.6□□□□□ -0.23
HERC1-204ENST00000559715 COL6A1P12109 1028 aa13.6□□□□□ -0.23
HERC1-204ENST00000559715 BMP8BP34820 402 aa13.6□□□□□ -0.23
HERC1-204ENST00000559715 TTC39AQ5SRH9 613 aa13.6□□□□□ -0.23
HERC1-204ENST00000559715 MORN1Q5T089 497 aa13.6□□□□□ -0.23
HERC1-204ENST00000559715 LHX8Q68G74 356 aa13.6□□□□□ -0.23
HERC1-204ENST00000559715 NECAB2Q7Z6G3 386 aa13.6□□□□□ -0.23
HERC1-204ENST00000559715 ANTXR1Q9H6X2 564 aa13.6□□□□□ -0.23
HERC1-204ENST00000559715 AS3MTQ9HBK9 375 aa13.6□□□□□ -0.23
HERC1-204ENST00000559715 HMX1Q9NP08 348 aaPredicted RBP13.6□□□□□ -0.23
HERC1-204ENST00000559715 GINM1Q9NU53 330 aa13.6□□□□□ -0.23
HERC1-204ENST00000559715 NDUFB9Q9Y6M9 179 aa13.6□□□□□ -0.23
HERC1-204ENST00000559715 SURF6O75683 361 aaKnown RBP13.59□□□□□ -0.23
HERC1-204ENST00000559715 PLCG2P16885 1265 aa13.59□□□□□ -0.23
HERC1-204ENST00000559715 CYP2B6P20813 491 aa13.59□□□□□ -0.23
HERC1-204ENST00000559715 CACNB2Q08289 660 aaPredicted RBP13.59□□□□□ -0.23
HERC1-204ENST00000559715 CCL14Q16627 93 aa13.59□□□□□ -0.23
HERC1-204ENST00000559715 CCDC158Q5M9N0 1113 aa13.59□□□□□ -0.23
HERC1-204ENST00000559715 ZKSCAN2Q63HK3 967 aa13.59□□□□□ -0.23
HERC1-204ENST00000559715 GPRC5AQ8NFJ5 357 aa13.59□□□□□ -0.23
HERC1-204ENST00000559715 C12orf42Q96LP6 360 aa13.59□□□□□ -0.23
HERC1-204ENST00000559715 CCDC8Q9H0W5 538 aaPredicted RBP13.59□□□□□ -0.23
HERC1-204ENST00000559715 SAP30BPQ9UHR5 308 aaKnown RBP13.59□□□□□ -0.23
HERC1-204ENST00000559715 PRKAR2AP13861 404 aaKnown RBP13.58□□□□□ -0.24
HERC1-204ENST00000559715 GUCY1A2P33402 732 aa13.58□□□□□ -0.24
HERC1-204ENST00000559715 ERVK-9P63128 1117 aa13.58□□□□□ -0.24
HERC1-204ENST00000559715 ERVK-24P63145 666 aa13.58□□□□□ -0.24
HERC1-204ENST00000559715 EVX2Q03828 476 aa13.58□□□□□ -0.24
HERC1-204ENST00000559715 NBPF3Q9H094 633 aa13.58□□□□□ -0.24
HERC1-204ENST00000559715 PARP14Q460N5 1801 aa13.57□□□□□ -0.24
HERC1-204ENST00000559715 GH2P01242 217 aa13.57□□□□□ -0.24
HERC1-204ENST00000559715 CYP7A1P22680 504 aa13.57□□□□□ -0.24
HERC1-204ENST00000559715 CCND3P30281 292 aaPredicted RBP13.57□□□□□ -0.24
HERC1-204ENST00000559715 IRX3P78415 501 aaPredicted RBP13.57□□□□□ -0.24
HERC1-204ENST00000559715 GPR142Q7Z601 462 aa13.57□□□□□ -0.24
HERC1-204ENST00000559715 MIGA1Q8NAN2 632 aa13.57□□□□□ -0.24
HERC1-204ENST00000559715 ACER1Q8TDN7 264 aa13.57□□□□□ -0.24
HERC1-204ENST00000559715 NUDT12Q9BQG2 462 aa13.57□□□□□ -0.24
HERC1-204ENST00000559715 RIOK1Q9BRS2 568 aaKnown RBP13.57□□□□□ -0.24
HERC1-204ENST00000559715 EHD4Q9H223 541 aa13.57□□□□□ -0.24
HERC1-204ENST00000559715 TMOD4Q9NZQ9 345 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 202.8 ms