RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 LRRC59Q96AG4 307 aaKnown RBP8.96□□□□□ -0.98
ZEB1-216ENST00000559496 ABCC6O95255 1503 aa8.95□□□□□ -0.98
ZEB1-216ENST00000559496 PHLPP1O60346 1717 aa8.95□□□□□ -0.98
ZEB1-216ENST00000559496 KIAA0232Q92628 1395 aa8.95□□□□□ -0.98
ZEB1-216ENST00000559496 CARNS1A5YM72 827 aa8.95□□□□□ -0.98
ZEB1-216ENST00000559496 CYP2E1P05181 493 aaPredicted RBP8.95□□□□□ -0.98
ZEB1-216ENST00000559496 NFE2L2Q16236 605 aa8.95□□□□□ -0.98
ZEB1-216ENST00000559496 NCAPG2Q86XI2 1143 aa8.95□□□□□ -0.98
ZEB1-216ENST00000559496 CEP120Q8N960 986 aa8.95□□□□□ -0.98
ZEB1-216ENST00000559496 ANKRD24Q8TF21 1146 aa8.95□□□□□ -0.98
ZEB1-216ENST00000559496 WFDC12Q8WWY7 111 aa8.95□□□□□ -0.98
ZEB1-216ENST00000559496 PHACTR3Q96KR7 559 aa8.95□□□□□ -0.98
ZEB1-216ENST00000559496 CNTN3Q9P232 1028 aa8.95□□□□□ -0.98
ZEB1-216ENST00000559496 USTQ9Y2C2 406 aa8.95□□□□□ -0.98
ZEB1-216ENST00000559496 PPME1Q9Y570 386 aa8.95□□□□□ -0.98
ZEB1-216ENST00000559496 KDRP35968 1356 aa8.94□□□□□ -0.98
ZEB1-216ENST00000559496 RRP9O43818 475 aaKnown RBP8.94□□□□□ -0.98
ZEB1-216ENST00000559496 FAM13AO94988 1023 aa8.94□□□□□ -0.98
ZEB1-216ENST00000559496 RIPK4P57078 832 aa8.94□□□□□ -0.98
ZEB1-216ENST00000559496 RBM10P98175 930 aaKnown RBP8.94□□□□□ -0.98
ZEB1-216ENST00000559496 ATP11AP98196 1134 aa8.94□□□□□ -0.98
ZEB1-216ENST00000559496 SF3B2Q13435 895 aaKnown RBP8.94□□□□□ -0.98
ZEB1-216ENST00000559496 CHRNA2Q15822 529 aa8.94□□□□□ -0.98
ZEB1-216ENST00000559496 C8orf34Q49A92 452 aa8.94□□□□□ -0.98
ZEB1-216ENST00000559496 TAF7LQ5H9L4 462 aa8.94□□□□□ -0.98
ZEB1-216ENST00000559496 PRDM11Q9NQV5 511 aa8.94□□□□□ -0.98
ZEB1-216ENST00000559496 COL18A1P39060 1754 aa8.94□□□□□ -0.98
ZEB1-216ENST00000559496 RGPD5Q99666 1765 aa8.94□□□□□ -0.98
ZEB1-216ENST00000559496 COL16A1Q07092 1604 aaPredicted RBP8.93□□□□□ -0.98
ZEB1-216ENST00000559496 E9PSI1 815 aa8.93□□□□□ -0.98
ZEB1-216ENST00000559496 IREB2P48200 963 aaKnown RBP8.93□□□□□ -0.98
ZEB1-216ENST00000559496 FKBP4Q02790 459 aaKnown RBP eCLIP8.93□□□□□ -0.98
ZEB1-216ENST00000559496 MTMR3Q13615 1198 aa8.93□□□□□ -0.98
ZEB1-216ENST00000559496 SETDB1Q15047 1291 aa8.93□□□□□ -0.98
ZEB1-216ENST00000559496 FOXD4L6Q3SYB3 417 aaPredicted RBP8.93□□□□□ -0.98
ZEB1-216ENST00000559496 FOXD4L3Q6VB84 417 aaPredicted RBP8.93□□□□□ -0.98
ZEB1-216ENST00000559496 WDR63Q8IWG1 891 aa8.93□□□□□ -0.98
ZEB1-216ENST00000559496 USHBP1Q8N6Y0 703 aa8.93□□□□□ -0.98
ZEB1-216ENST00000559496 PMEPA1Q969W9 287 aa8.93□□□□□ -0.98
ZEB1-216ENST00000559496 TP53INP1Q96A56 240 aa8.93□□□□□ -0.98
ZEB1-216ENST00000559496 PBX4Q9BYU1 374 aa8.93□□□□□ -0.98
ZEB1-216ENST00000559496 RASSF4Q9H2L5 321 aa8.93□□□□□ -0.98
ZEB1-216ENST00000559496 NOS3P29474 1203 aa8.92□□□□□ -0.98
ZEB1-216ENST00000559496 SLFN5Q08AF3 891 aa8.92□□□□□ -0.98
ZEB1-216ENST00000559496 LMOD3Q0VAK6 560 aa8.92□□□□□ -0.98
ZEB1-216ENST00000559496 NBPF6Q5VWK0 638 aa8.92□□□□□ -0.98
ZEB1-216ENST00000559496 TMEM130Q8N3G9 435 aa8.92□□□□□ -0.98
ZEB1-216ENST00000559496 C1orf127Q8N9H9 656 aa8.92□□□□□ -0.98
ZEB1-216ENST00000559496 NBPF4Q96M43 638 aa8.92□□□□□ -0.98
ZEB1-216ENST00000559496 MRPL18Q9H0U6 180 aaKnown RBP8.92□□□□□ -0.98
ZEB1-216ENST00000559496 SALL4Q9UJQ4 1053 aa8.92□□□□□ -0.98
ZEB1-216ENST00000559496 POLIQ9UNA4 740 aa8.92□□□□□ -0.98
ZEB1-216ENST00000559496 COL22A1Q8NFW1 1626 aaPredicted RBP8.92□□□□□ -0.98
ZEB1-216ENST00000559496 RGPD2P0DJD1 1756 aa8.92□□□□□ -0.98
ZEB1-216ENST00000559496 CAMTA1Q9Y6Y1 1673 aa8.91□□□□□ -0.98
ZEB1-216ENST00000559496 DLG5Q8TDM6 1919 aa8.91□□□□□ -0.98
ZEB1-216ENST00000559496 CES1P23141 567 aa8.91□□□□□ -0.98
ZEB1-216ENST00000559496 CDC27P30260 824 aa8.91□□□□□ -0.98
ZEB1-216ENST00000559496 PRSS36Q5K4E3 855 aa8.91□□□□□ -0.98
ZEB1-216ENST00000559496 ZMYM1Q5SVZ6 1142 aa8.91□□□□□ -0.98
ZEB1-216ENST00000559496 DUSP27Q5VZP5 1158 aa8.91□□□□□ -0.98
ZEB1-216ENST00000559496 NCAPD2Q15021 1401 aa8.91□□□□□ -0.98
ZEB1-216ENST00000559496 FAM208AQ9UK61 1670 aaKnown RBP8.91□□□□□ -0.98
ZEB1-216ENST00000559496 LINC01387J3KSC0 135 aa8.9□□□□□ -0.98
ZEB1-216ENST00000559496 USP5P45974 858 aa8.9□□□□□ -0.98
ZEB1-216ENST00000559496 B4GALNT3Q6L9W6 998 aa8.9□□□□□ -0.98
ZEB1-216ENST00000559496 TRMT2AQ8IZ69 625 aaKnown RBP8.9□□□□□ -0.98
ZEB1-216ENST00000559496 LACRTQ9GZZ8 138 aa8.9□□□□□ -0.98
ZEB1-216ENST00000559496 MYH16Q9H6N6 1097 aa8.9□□□□□ -0.98
ZEB1-216ENST00000559496 NLRP2Q9NX02 1062 aa8.9□□□□□ -0.98
ZEB1-216ENST00000559496 KANSL3Q9P2N6 904 aa8.9□□□□□ -0.98
ZEB1-216ENST00000559496 LMO7Q8WWI1 1683 aa8.9□□□□□ -0.98
ZEB1-216ENST00000559496 IL16Q14005 1332 aa8.9□□□□□ -0.99
ZEB1-216ENST00000559496 A6NHS1 94 aa8.89□□□□□ -0.99
ZEB1-216ENST00000559496 ABL1P00519 1130 aa8.89□□□□□ -0.99
ZEB1-216ENST00000559496 CALD1Q05682 793 aaKnown RBP8.89□□□□□ -0.99
ZEB1-216ENST00000559496 EHHADHQ08426 723 aa8.89□□□□□ -0.99
ZEB1-216ENST00000559496 MTHFSDQ2M296 383 aaKnown RBP8.89□□□□□ -0.99
ZEB1-216ENST00000559496 IPO9Q96P70 1041 aaKnown RBP8.89□□□□□ -0.99
ZEB1-216ENST00000559496 POP1Q99575 1024 aaKnown RBP8.89□□□□□ -0.99
ZEB1-216ENST00000559496 AKTIPQ9H8T0 292 aa8.89□□□□□ -0.99
ZEB1-216ENST00000559496 FAM83GA6ND36 823 aa8.88□□□□□ -0.99
ZEB1-216ENST00000559496 PTPRAP18433 802 aa8.88□□□□□ -0.99
ZEB1-216ENST00000559496 THUMPD2Q9BTF0 503 aaKnown RBP8.88□□□□□ -0.99
ZEB1-216ENST00000559496 ADAM19Q9H013 955 aa8.88□□□□□ -0.99
ZEB1-216ENST00000559496 RCAN3Q9UKA8 241 aa8.88□□□□□ -0.99
ZEB1-216ENST00000559496 COL5A2P05997 1499 aaPredicted RBP8.88□□□□□ -0.99
ZEB1-216ENST00000559496 FAM177BA6PVY3 158 aa8.87□□□□□ -0.99
ZEB1-216ENST00000559496 F8W735 103 aaPredicted RBP8.87□□□□□ -0.99
ZEB1-216ENST00000559496 FZD6O60353 706 aa8.87□□□□□ -0.99
ZEB1-216ENST00000559496 ANP32AP39687 249 aaKnown RBP8.87□□□□□ -0.99
ZEB1-216ENST00000559496 PLEKHO1Q53GL0 409 aaPredicted RBP8.87□□□□□ -0.99
ZEB1-216ENST00000559496 ADAMTSL4Q6UY14 1074 aa8.87□□□□□ -0.99
ZEB1-216ENST00000559496 RAPGEF4Q8WZA2 1011 aa8.87□□□□□ -0.99
ZEB1-216ENST00000559496 RTF1Q92541 710 aaKnown RBP8.87□□□□□ -0.99
ZEB1-216ENST00000559496 MEGF10Q96KG7 1140 aa8.87□□□□□ -0.99
ZEB1-216ENST00000559496 CHRDQ9H2X0 955 aa8.87□□□□□ -0.99
ZEB1-216ENST00000559496 EGFL7Q9UHF1 273 aa8.87□□□□□ -0.99
ZEB1-216ENST00000559496 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.87□□□□□ -0.99
ZEB1-216ENST00000559496 COL14A1Q05707 1796 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms