RNA–Protein interactions for RNA: ENST00000559457.1

AC055874.1-202, humanhuman

TSL 3

Gene AC055874.1, Length 462 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055874.1-202ENST00000559457 CDK8P49336 464 aa22.3■■□□□ 1.16
AC055874.1-202ENST00000559457 CERKLQ49MI3 558 aaPredicted RBP22.3■■□□□ 1.16
AC055874.1-202ENST00000559457 C16orf86Q6ZW13 317 aa22.3■■□□□ 1.16
AC055874.1-202ENST00000559457 SWAP70Q9UH65 585 aa22.3■■□□□ 1.16
AC055874.1-202ENST00000559457 PTPRFP10586 1907 aa22.29■■□□□ 1.16
AC055874.1-202ENST00000559457 IRF6O14896 467 aa22.29■■□□□ 1.16
AC055874.1-202ENST00000559457 GH2P01242 217 aa22.29■■□□□ 1.16
AC055874.1-202ENST00000559457 FGAP02671 866 aa22.29■■□□□ 1.16
AC055874.1-202ENST00000559457 PPATQ06203 517 aa22.29■■□□□ 1.16
AC055874.1-202ENST00000559457 PPIL2Q13356 520 aa22.29■■□□□ 1.16
AC055874.1-202ENST00000559457 ZBTB21Q9ULJ3 1066 aa22.29■■□□□ 1.16
AC055874.1-202ENST00000559457 ZHX2Q9Y6X8 837 aa22.29■■□□□ 1.16
AC055874.1-202ENST00000559457 ROBO3Q96MS0 1386 aa22.28■■□□□ 1.16
AC055874.1-202ENST00000559457 SGSM2O43147 1006 aa22.28■■□□□ 1.16
AC055874.1-202ENST00000559457 PPARAQ07869 468 aa22.28■■□□□ 1.16
AC055874.1-202ENST00000559457 ABCB5Q2M3G0 1257 aa22.28■■□□□ 1.16
AC055874.1-202ENST00000559457 LAMA4Q16363 1823 aa22.27■■□□□ 1.16
AC055874.1-202ENST00000559457 ASNSP08243 561 aa22.27■■□□□ 1.16
AC055874.1-202ENST00000559457 CTDSPL2Q05D32 466 aa22.27■■□□□ 1.16
AC055874.1-202ENST00000559457 TAOK2Q9UL54 1235 aa22.27■■□□□ 1.16
AC055874.1-202ENST00000559457 MANSC4A6NHS7 340 aaPredicted RBP22.26■■□□□ 1.15
AC055874.1-202ENST00000559457 MPHOSPH10O00566 681 aaKnown RBP22.26■■□□□ 1.15
AC055874.1-202ENST00000559457 CDC45O75419 566 aa22.26■■□□□ 1.15
AC055874.1-202ENST00000559457 AKR1B1P15121 316 aa22.26■■□□□ 1.15
AC055874.1-202ENST00000559457 HAND2P61296 217 aa22.26■■□□□ 1.15
AC055874.1-202ENST00000559457 MS4A4AQ96JQ5 239 aa22.26■■□□□ 1.15
AC055874.1-202ENST00000559457 DSCC1Q9BVC3 393 aa22.26■■□□□ 1.15
AC055874.1-202ENST00000559457 AFG3L2Q9Y4W6 797 aa22.26■■□□□ 1.15
AC055874.1-202ENST00000559457 ZMYM6O95789 1325 aa22.26■■□□□ 1.15
AC055874.1-202ENST00000559457 USP17L5A8MUK1 530 aa22.25■■□□□ 1.15
AC055874.1-202ENST00000559457 PRDM1O75626 825 aa22.25■■□□□ 1.15
AC055874.1-202ENST00000559457 GTF2A2P52657 109 aa22.25■■□□□ 1.15
AC055874.1-202ENST00000559457 PTH1RQ03431 593 aa22.25■■□□□ 1.15
AC055874.1-202ENST00000559457 ESYT1Q9BSJ8 1104 aa22.25■■□□□ 1.15
AC055874.1-202ENST00000559457 MKNK2Q9HBH9 465 aa22.25■■□□□ 1.15
AC055874.1-202ENST00000559457 CABP5Q9NP86 173 aa22.25■■□□□ 1.15
AC055874.1-202ENST00000559457 GINM1Q9NU53 330 aa22.25■■□□□ 1.15
AC055874.1-202ENST00000559457 KCNH4Q9UQ05 1017 aa22.25■■□□□ 1.15
AC055874.1-202ENST00000559457 CCL15-CCL14A0A0B4J2E2 113 aa22.24■■□□□ 1.15
AC055874.1-202ENST00000559457 TRIM75PA6NK02 468 aa22.24■■□□□ 1.15
AC055874.1-202ENST00000559457 SLC3A2P08195 630 aaKnown RBP22.24■■□□□ 1.15
AC055874.1-202ENST00000559457 GUCY1A2P33402 732 aa22.24■■□□□ 1.15
AC055874.1-202ENST00000559457 MAP2K1Q02750 393 aaPredicted RBP22.24■■□□□ 1.15
AC055874.1-202ENST00000559457 SREBF2Q12772 1141 aa22.24■■□□□ 1.15
AC055874.1-202ENST00000559457 SNAPC2Q13487 334 aa22.24■■□□□ 1.15
AC055874.1-202ENST00000559457 RAB3GAP1Q15042 981 aa22.24■■□□□ 1.15
AC055874.1-202ENST00000559457 CCL15Q16663 113 aa22.24■■□□□ 1.15
AC055874.1-202ENST00000559457 INCENPQ9NQS7 918 aa22.24■■□□□ 1.15
AC055874.1-202ENST00000559457 ANAPC4Q9UJX5 808 aa22.24■■□□□ 1.15
AC055874.1-202ENST00000559457 TACC3Q9Y6A5 838 aa22.24■■□□□ 1.15
AC055874.1-202ENST00000559457 RASA1P20936 1047 aa22.23■■□□□ 1.15
AC055874.1-202ENST00000559457 TM4SF4P48230 202 aa22.23■■□□□ 1.15
AC055874.1-202ENST00000559457 SPP2Q13103 211 aa22.23■■□□□ 1.15
AC055874.1-202ENST00000559457 SEPT2Q15019 361 aa22.23■■□□□ 1.15
AC055874.1-202ENST00000559457 REM2Q8IYK8 340 aaPredicted RBP22.23■■□□□ 1.15
AC055874.1-202ENST00000559457 BRI3BPQ8WY22 251 aa22.23■■□□□ 1.15
AC055874.1-202ENST00000559457 WBP1LQ9NX94 342 aa22.23■■□□□ 1.15
AC055874.1-202ENST00000559457 GREB1LQ9C091 1923 aaPredicted RBP22.22■■□□□ 1.15
AC055874.1-202ENST00000559457 CXCL11O14625 94 aa22.22■■□□□ 1.15
AC055874.1-202ENST00000559457 CETPP11597 493 aa22.22■■□□□ 1.15
AC055874.1-202ENST00000559457 PDE4BQ07343 736 aa22.22■■□□□ 1.15
AC055874.1-202ENST00000559457 CASC1Q6TDU7 716 aa22.22■■□□□ 1.15
AC055874.1-202ENST00000559457 ZNF280CQ8ND82 737 aa22.22■■□□□ 1.15
AC055874.1-202ENST00000559457 CCDC17Q96LX7 622 aa22.22■■□□□ 1.15
AC055874.1-202ENST00000559457 NBPF3Q9H094 633 aa22.22■■□□□ 1.15
AC055874.1-202ENST00000559457 AS3MTQ9HBK9 375 aa22.22■■□□□ 1.15
AC055874.1-202ENST00000559457 GTF3C3Q9Y5Q9 886 aa22.22■■□□□ 1.15
AC055874.1-202ENST00000559457 PCNTO95613 3336 aa22.22■■□□□ 1.15
AC055874.1-202ENST00000559457 TESPA1A2RU30 521 aaPredicted RBP22.21■■□□□ 1.15
AC055874.1-202ENST00000559457 IGF2BP3O00425 579 aaKnown RBP eCLIP22.21■■□□□ 1.15
AC055874.1-202ENST00000559457 INHBEP58166 350 aa22.21■■□□□ 1.15
AC055874.1-202ENST00000559457 TMEM179Q6ZVK1 233 aa22.21■■□□□ 1.15
AC055874.1-202ENST00000559457 IFNL1Q8IU54 200 aa22.21■■□□□ 1.15
AC055874.1-202ENST00000559457 CLEC10AQ8IUN9 316 aa22.21■■□□□ 1.15
AC055874.1-202ENST00000559457 PTPN18Q99952 460 aa22.21■■□□□ 1.15
AC055874.1-202ENST00000559457 WDR18Q9BV38 432 aa22.21■■□□□ 1.15
AC055874.1-202ENST00000559457 ZNF287Q9HBT7 754 aa22.21■■□□□ 1.15
AC055874.1-202ENST00000559457 CTNNA3Q9UI47 895 aa22.21■■□□□ 1.15
AC055874.1-202ENST00000559457 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.21■■□□□ 1.15
AC055874.1-202ENST00000559457 HSPA1AP0DMV8 641 aaKnown RBP22.2■■□□□ 1.14
AC055874.1-202ENST00000559457 HSPA1BP0DMV9 641 aaKnown RBP22.2■■□□□ 1.14
AC055874.1-202ENST00000559457 KIAA1211Q6ZU35 1233 aa22.2■■□□□ 1.14
AC055874.1-202ENST00000559457 TBC1D10CQ8IV04 446 aa22.2■■□□□ 1.14
AC055874.1-202ENST00000559457 ZNF444Q8N0Y2 327 aaPredicted RBP22.2■■□□□ 1.14
AC055874.1-202ENST00000559457 BEGAINQ9BUH8 593 aa22.2■■□□□ 1.14
AC055874.1-202ENST00000559457 TBC1D2Q9BYX2 928 aa22.2■■□□□ 1.14
AC055874.1-202ENST00000559457 A0A0G2JLL6 359 aaPredicted RBP22.19■■□□□ 1.14
AC055874.1-202ENST00000559457 ZNF213O14771 459 aa22.19■■□□□ 1.14
AC055874.1-202ENST00000559457 DGKZQ13574 1117 aa22.19■■□□□ 1.14
AC055874.1-202ENST00000559457 MTMR2Q13614 643 aa22.19■■□□□ 1.14
AC055874.1-202ENST00000559457 MOGSQ13724 837 aa22.19■■□□□ 1.14
AC055874.1-202ENST00000559457 FAM47AQ5JRC9 791 aa22.19■■□□□ 1.14
AC055874.1-202ENST00000559457 GADL1Q6ZQY3 521 aa22.19■■□□□ 1.14
AC055874.1-202ENST00000559457 PRRT2Q7Z6L0 340 aaPredicted RBP22.19■■□□□ 1.14
AC055874.1-202ENST00000559457 ACER1Q8TDN7 264 aa22.19■■□□□ 1.14
AC055874.1-202ENST00000559457 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.19■■□□□ 1.14
AC055874.1-202ENST00000559457 LSG1Q9H089 658 aaKnown RBP22.19■■□□□ 1.14
AC055874.1-202ENST00000559457 RNF186Q9NXI6 227 aa22.19■■□□□ 1.14
AC055874.1-202ENST00000559457 LOC285556D6RIA3 1793 aa22.19■■□□□ 1.14
AC055874.1-202ENST00000559457 MYH4Q9Y623 1939 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms