RNA–Protein interactions for RNA: ENST00000559218.1

CLPX-205, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 4

Gene CLPX, Length 533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-205ENST00000559218 COL2A1P02458 1487 aaPredicted RBP10.65□□□□□ -0.7
CLPX-205ENST00000559218 A0A1W2PPC1 479 aa10.64□□□□□ -0.71
CLPX-205ENST00000559218 PABPC4Q13310 644 aaKnown RBP eCLIP10.64□□□□□ -0.71
CLPX-205ENST00000559218 SH3D19Q5HYK7 790 aa10.64□□□□□ -0.71
CLPX-205ENST00000559218 ADGRA1Q86SQ6 560 aa10.64□□□□□ -0.71
CLPX-205ENST00000559218 TRIB2Q92519 343 aa10.64□□□□□ -0.71
CLPX-205ENST00000559218 P2RX7Q99572 595 aaKnown RBP10.64□□□□□ -0.71
CLPX-205ENST00000559218 WDR18Q9BV38 432 aa10.64□□□□□ -0.71
CLPX-205ENST00000559218 DNAJC18Q9H819 358 aa10.64□□□□□ -0.71
CLPX-205ENST00000559218 TXNRD2Q9NNW7 524 aa10.64□□□□□ -0.71
CLPX-205ENST00000559218 AATFQ9NY61 560 aaKnown RBP eCLIP10.64□□□□□ -0.71
CLPX-205ENST00000559218 MORF4L1Q9UBU8 362 aa10.64□□□□□ -0.71
CLPX-205ENST00000559218 HERC5Q9UII4 1024 aaKnown RBP10.64□□□□□ -0.71
CLPX-205ENST00000559218 ZMYND8Q9ULU4 1186 aaPredicted RBP10.64□□□□□ -0.71
CLPX-205ENST00000559218 RPTORQ8N122 1335 aa10.63□□□□□ -0.71
CLPX-205ENST00000559218 LOC285556D6RIA3 1793 aa10.63□□□□□ -0.71
CLPX-205ENST00000559218 GNAI2P04899 355 aa10.63□□□□□ -0.71
CLPX-205ENST00000559218 TRIM27P14373 513 aa10.63□□□□□ -0.71
CLPX-205ENST00000559218 CAPN2P17655 700 aa10.63□□□□□ -0.71
CLPX-205ENST00000559218 CYP2B6P20813 491 aa10.63□□□□□ -0.71
CLPX-205ENST00000559218 BACE1P56817 501 aa10.63□□□□□ -0.71
CLPX-205ENST00000559218 IRX3P78415 501 aaPredicted RBP10.63□□□□□ -0.71
CLPX-205ENST00000559218 NAA16Q6N069 864 aaPredicted RBP10.63□□□□□ -0.71
CLPX-205ENST00000559218 POTEEQ6S8J3 1075 aa10.63□□□□□ -0.71
CLPX-205ENST00000559218 MAPKAPK5Q8IW41 473 aa10.63□□□□□ -0.71
CLPX-205ENST00000559218 ANKLE1Q8NAG6 615 aa10.63□□□□□ -0.71
CLPX-205ENST00000559218 TGFBRAP1Q8WUH2 860 aa10.63□□□□□ -0.71
CLPX-205ENST00000559218 GDF15Q99988 308 aa10.63□□□□□ -0.71
CLPX-205ENST00000559218 TBC1D2Q9BYX2 928 aa10.63□□□□□ -0.71
CLPX-205ENST00000559218 HMX1Q9NP08 348 aaPredicted RBP10.63□□□□□ -0.71
CLPX-205ENST00000559218 PI4KBQ9UBF8 816 aa10.63□□□□□ -0.71
CLPX-205ENST00000559218 UNC80Q8N2C7 3258 aa10.63□□□□□ -0.71
CLPX-205ENST00000559218 BCAR3O75815 825 aa10.62□□□□□ -0.71
CLPX-205ENST00000559218 GDF11O95390 407 aa10.62□□□□□ -0.71
CLPX-205ENST00000559218 UQCRFS1P1P0C7P4 283 aa10.62□□□□□ -0.71
CLPX-205ENST00000559218 SYN1P17600 705 aa10.62□□□□□ -0.71
CLPX-205ENST00000559218 PPP4CP60510 307 aa10.62□□□□□ -0.71
CLPX-205ENST00000559218 HERVK_113P62684 666 aa10.62□□□□□ -0.71
CLPX-205ENST00000559218 G3BP1Q13283 466 aaKnown RBP eCLIP10.62□□□□□ -0.71
CLPX-205ENST00000559218 MAP3K21Q5TCX8 1036 aa10.62□□□□□ -0.71
CLPX-205ENST00000559218 METTL16Q86W50 562 aaKnown RBP10.62□□□□□ -0.71
CLPX-205ENST00000559218 SLC17A8Q8NDX2 589 aa10.62□□□□□ -0.71
CLPX-205ENST00000559218 GPRC5AQ8NFJ5 357 aa10.62□□□□□ -0.71
CLPX-205ENST00000559218 CLUAP1Q96AJ1 413 aa10.62□□□□□ -0.71
CLPX-205ENST00000559218 MS4A3Q96HJ5 214 aa10.62□□□□□ -0.71
CLPX-205ENST00000559218 DBNDD2Q9BQY9 259 aa10.62□□□□□ -0.71
CLPX-205ENST00000559218 NBPF3Q9H094 633 aa10.62□□□□□ -0.71
CLPX-205ENST00000559218 DHX36Q9H2U1 1008 aaKnown RBP10.62□□□□□ -0.71
CLPX-205ENST00000559218 AS3MTQ9HBK9 375 aa10.62□□□□□ -0.71
CLPX-205ENST00000559218 TMOD4Q9NZQ9 345 aa10.62□□□□□ -0.71
CLPX-205ENST00000559218 RBPJLQ9UBG7 517 aa10.62□□□□□ -0.71
CLPX-205ENST00000559218 SAP30BPQ9UHR5 308 aaKnown RBP10.62□□□□□ -0.71
CLPX-205ENST00000559218 OGDHLQ9ULD0 1010 aa10.62□□□□□ -0.71
CLPX-205ENST00000559218 PALD1Q9ULE6 856 aa10.62□□□□□ -0.71
CLPX-205ENST00000559218 ALPK3Q96L96 1907 aa10.62□□□□□ -0.71
CLPX-205ENST00000559218 FLT1P17948 1338 aa10.61□□□□□ -0.71
CLPX-205ENST00000559218 BAG3O95817 575 aa10.61□□□□□ -0.71
CLPX-205ENST00000559218 CYP2E1P05181 493 aaPredicted RBP10.61□□□□□ -0.71
CLPX-205ENST00000559218 ASNSP08243 561 aa10.61□□□□□ -0.71
CLPX-205ENST00000559218 HOXA7P31268 230 aaPredicted RBP10.61□□□□□ -0.71
CLPX-205ENST00000559218 MAGEA10P43363 369 aaPredicted RBP10.61□□□□□ -0.71
CLPX-205ENST00000559218 TTC39AQ5SRH9 613 aa10.61□□□□□ -0.71
CLPX-205ENST00000559218 USP6NLQ92738 828 aa10.61□□□□□ -0.71
CLPX-205ENST00000559218 FRAT1Q92837 279 aaPredicted RBP10.61□□□□□ -0.71
CLPX-205ENST00000559218 NOL10Q9BSC4 688 aaKnown RBP10.61□□□□□ -0.71
CLPX-205ENST00000559218 PORCNQ9H237 461 aa10.61□□□□□ -0.71
CLPX-205ENST00000559218 C11orf49Q9H6J7 331 aa10.61□□□□□ -0.71
CLPX-205ENST00000559218 PIH1D3Q9NQM4 214 aaKnown RBP10.61□□□□□ -0.71
CLPX-205ENST00000559218 EMILIN3Q9NT22 766 aa10.61□□□□□ -0.71
CLPX-205ENST00000559218 ZBTB21Q9ULJ3 1066 aa10.61□□□□□ -0.71
CLPX-205ENST00000559218 SIPA1L1O43166 1804 aa10.61□□□□□ -0.71
CLPX-205ENST00000559218 PFASO15067 1338 aa10.6□□□□□ -0.71
CLPX-205ENST00000559218 DLL1O00548 723 aa10.6□□□□□ -0.71
CLPX-205ENST00000559218 PLCG2P16885 1265 aa10.6□□□□□ -0.71
CLPX-205ENST00000559218 BMP8BP34820 402 aa10.6□□□□□ -0.71
CLPX-205ENST00000559218 DYNLL1P63167 89 aaKnown RBP10.6□□□□□ -0.71
CLPX-205ENST00000559218 CACNB2Q08289 660 aaPredicted RBP10.6□□□□□ -0.71
CLPX-205ENST00000559218 CCL14Q16627 93 aa10.6□□□□□ -0.71
CLPX-205ENST00000559218 Q3C1V9 767 aa10.6□□□□□ -0.71
CLPX-205ENST00000559218 TNNI3KQ59H18 835 aa10.6□□□□□ -0.71
CLPX-205ENST00000559218 ASTLQ6HA08 431 aaPredicted RBP10.6□□□□□ -0.71
CLPX-205ENST00000559218 ATF7IPQ6VMQ6 1270 aa10.6□□□□□ -0.71
CLPX-205ENST00000559218 Q7L0L9 218 aa10.6□□□□□ -0.71
CLPX-205ENST00000559218 FOXP4Q8IVH2 680 aaPredicted RBP10.6□□□□□ -0.71
CLPX-205ENST00000559218 CRACR2BQ8N4Y2 399 aaPredicted RBP10.6□□□□□ -0.71
CLPX-205ENST00000559218 NUDT12Q9BQG2 462 aa10.6□□□□□ -0.71
CLPX-205ENST00000559218 PAGR1Q9BTK6 254 aa10.6□□□□□ -0.71
CLPX-205ENST00000559218 FPGT-TNNI3KV9GXZ4 949 aa10.6□□□□□ -0.71
CLPX-205ENST00000559218 PLXNB2O15031 1838 aa10.59□□□□□ -0.71
CLPX-205ENST00000559218 ATAD5Q96QE3 1844 aa10.59□□□□□ -0.71
CLPX-205ENST00000559218 C19orf81C9J6K1 198 aa10.59□□□□□ -0.71
CLPX-205ENST00000559218 USP17L10C9JJH3 530 aa10.59□□□□□ -0.71
CLPX-205ENST00000559218 IPO8O15397 1037 aaKnown RBP10.59□□□□□ -0.71
CLPX-205ENST00000559218 GH2P01242 217 aa10.59□□□□□ -0.71
CLPX-205ENST00000559218 COL6A1P12109 1028 aa10.59□□□□□ -0.71
CLPX-205ENST00000559218 XRCC5P13010 732 aaKnown RBP10.59□□□□□ -0.71
CLPX-205ENST00000559218 ZKSCAN1P17029 563 aaPredicted RBP10.59□□□□□ -0.71
CLPX-205ENST00000559218 CCND3P30281 292 aaPredicted RBP10.59□□□□□ -0.71
CLPX-205ENST00000559218 MAPK4P31152 587 aa10.59□□□□□ -0.71
CLPX-205ENST00000559218 ZAP70P43403 619 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms