RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 NUP133Q8WUM0 1156 aa18.98■□□□□ 0.63
SPG11-215ENST00000559193 CCDC196A0A1B0GTZ2 297 aa18.98■□□□□ 0.63
SPG11-215ENST00000559193 ZSCAN12O43309 604 aa18.98■□□□□ 0.63
SPG11-215ENST00000559193 ARHGAP29Q52LW3 1261 aa18.98■□□□□ 0.63
SPG11-215ENST00000559193 PDILTQ8N807 584 aa18.98■□□□□ 0.63
SPG11-215ENST00000559193 TC2NQ8N9U0 490 aa18.98■□□□□ 0.63
SPG11-215ENST00000559193 PARP3Q9Y6F1 533 aa18.98■□□□□ 0.63
SPG11-215ENST00000559193 SLFN14P0C7P3 912 aa18.97■□□□□ 0.63
SPG11-215ENST00000559193 ATP2B1P20020 1258 aa18.97■□□□□ 0.63
SPG11-215ENST00000559193 PPARAQ07869 468 aa18.97■□□□□ 0.63
SPG11-215ENST00000559193 TMTC2Q8N394 836 aa18.97■□□□□ 0.63
SPG11-215ENST00000559193 TRIML1Q8N9V2 468 aa18.97■□□□□ 0.63
SPG11-215ENST00000559193 BAG1Q99933 345 aaPredicted RBP18.97■□□□□ 0.63
SPG11-215ENST00000559193 CSRNP2Q9H175 543 aa18.97■□□□□ 0.63
SPG11-215ENST00000559193 DACH1Q9UI36 760 aa18.97■□□□□ 0.63
SPG11-215ENST00000559193 CLCN6P51797 869 aa18.97■□□□□ 0.63
SPG11-215ENST00000559193 SPECC1LQ69YQ0 1117 aa18.97■□□□□ 0.63
SPG11-215ENST00000559193 ADGRA1Q86SQ6 560 aa18.97■□□□□ 0.63
SPG11-215ENST00000559193 RNF41Q9H4P4 317 aaPredicted RBP18.97■□□□□ 0.63
SPG11-215ENST00000559193 CABP5Q9NP86 173 aa18.97■□□□□ 0.63
SPG11-215ENST00000559193 SEC23AQ15436 765 aa18.96■□□□□ 0.63
SPG11-215ENST00000559193 SPATA20Q8TB22 786 aa18.96■□□□□ 0.63
SPG11-215ENST00000559193 FAM205CA6NFA0 338 aa18.96■□□□□ 0.63
SPG11-215ENST00000559193 SMIM22K7EJ46 135 aa18.96■□□□□ 0.63
SPG11-215ENST00000559193 URI1O94763 535 aaPredicted RBP18.96■□□□□ 0.63
SPG11-215ENST00000559193 EIF5P55010 431 aaKnown RBP18.96■□□□□ 0.63
SPG11-215ENST00000559193 UBAC1Q9BSL1 405 aa18.96■□□□□ 0.63
SPG11-215ENST00000559193 LRP2BPQ9P2M1 347 aa18.96■□□□□ 0.63
SPG11-215ENST00000559193 CEP131Q9UPN4 1083 aa18.96■□□□□ 0.63
SPG11-215ENST00000559193 TADA3O75528 432 aa18.95■□□□□ 0.62
SPG11-215ENST00000559193 CDK11BP21127 795 aaKnown RBP18.95■□□□□ 0.62
SPG11-215ENST00000559193 ADKP55263 362 aaKnown RBP18.95■□□□□ 0.62
SPG11-215ENST00000559193 SDR42E1Q8WUS8 393 aa18.95■□□□□ 0.62
SPG11-215ENST00000559193 SAMSN1Q9NSI8 373 aaKnown RBP18.95■□□□□ 0.62
SPG11-215ENST00000559193 TNKSO95271 1327 aa18.95■□□□□ 0.62
SPG11-215ENST00000559193 BCL9LQ86UU0 1499 aa18.95■□□□□ 0.62
SPG11-215ENST00000559193 STX10O60499 249 aa18.95■□□□□ 0.62
SPG11-215ENST00000559193 PLCD1P51178 756 aa18.95■□□□□ 0.62
SPG11-215ENST00000559193 TOGARAM2Q6ZUX3 1019 aa18.95■□□□□ 0.62
SPG11-215ENST00000559193 NUTM2AQ8IVF1 878 aaPredicted RBP18.95■□□□□ 0.62
SPG11-215ENST00000559193 SRRTQ9BXP5 876 aaKnown RBP18.95■□□□□ 0.62
SPG11-215ENST00000559193 RNF26Q9BY78 433 aaPredicted RBP18.95■□□□□ 0.62
SPG11-215ENST00000559193 A0A087X0B3 334 aa18.94■□□□□ 0.62
SPG11-215ENST00000559193 CYP7A1P22680 504 aa18.94■□□□□ 0.62
SPG11-215ENST00000559193 KANK3Q6NY19 840 aa18.94■□□□□ 0.62
SPG11-215ENST00000559193 RAI14Q9P0K7 980 aa18.94■□□□□ 0.62
SPG11-215ENST00000559193 FHOD1Q9Y613 1164 aa18.94■□□□□ 0.62
SPG11-215ENST00000559193 COL4A1P02462 1669 aa18.94■□□□□ 0.62
SPG11-215ENST00000559193 TERF2Q15554 542 aa18.94■□□□□ 0.62
SPG11-215ENST00000559193 EARS2Q5JPH6 523 aaKnown RBP18.94■□□□□ 0.62
SPG11-215ENST00000559193 ZNF771Q7L3S4 317 aaPredicted RBP18.94■□□□□ 0.62
SPG11-215ENST00000559193 FAM177A1Q8N128 213 aaPredicted RBP18.94■□□□□ 0.62
SPG11-215ENST00000559193 UBXN4Q92575 508 aa18.94■□□□□ 0.62
SPG11-215ENST00000559193 NOL10Q9BSC4 688 aaKnown RBP18.94■□□□□ 0.62
SPG11-215ENST00000559193 CARD6Q9BX69 1037 aa18.94■□□□□ 0.62
SPG11-215ENST00000559193 ST7Q9NRC1 585 aa18.94■□□□□ 0.62
SPG11-215ENST00000559193 VPS54Q9P1Q0 977 aa18.94■□□□□ 0.62
SPG11-215ENST00000559193 RTL9Q8NET4 1388 aa18.93■□□□□ 0.62
SPG11-215ENST00000559193 MINDY4BA8MYZ0 360 aa18.93■□□□□ 0.62
SPG11-215ENST00000559193 IGHMBP2P38935 993 aaKnown RBP18.93■□□□□ 0.62
SPG11-215ENST00000559193 PKN1Q16512 942 aa18.93■□□□□ 0.62
SPG11-215ENST00000559193 CCDC152Q4G0S7 254 aa18.93■□□□□ 0.62
SPG11-215ENST00000559193 INTS5Q6P9B9 1019 aaKnown RBP18.93■□□□□ 0.62
SPG11-215ENST00000559193 MNS1Q8NEH6 495 aa18.93■□□□□ 0.62
SPG11-215ENST00000559193 WDR24Q96S15 920 aa18.93■□□□□ 0.62
SPG11-215ENST00000559193 ANAPC4Q9UJX5 808 aa18.93■□□□□ 0.62
SPG11-215ENST00000559193 IQSEC3Q9UPP2 1182 aaPredicted RBP18.93■□□□□ 0.62
SPG11-215ENST00000559193 PHLPP1O60346 1717 aa18.93■□□□□ 0.62
SPG11-215ENST00000559193 CICQ96RK0 1608 aaPredicted RBP18.93■□□□□ 0.62
SPG11-215ENST00000559193 CHRNDQ07001 517 aa18.93■□□□□ 0.62
SPG11-215ENST00000559193 NR1I3Q14994 352 aa18.93■□□□□ 0.62
SPG11-215ENST00000559193 AATFQ9NY61 560 aaKnown RBP eCLIP18.93■□□□□ 0.62
SPG11-215ENST00000559193 ZNF335Q9H4Z2 1342 aaPredicted RBP18.93■□□□□ 0.62
SPG11-215ENST00000559193 TRIM75PA6NK02 468 aa18.92■□□□□ 0.62
SPG11-215ENST00000559193 ERCC5P28715 1186 aaPredicted RBP18.92■□□□□ 0.62
SPG11-215ENST00000559193 FUT2Q10981 343 aa18.92■□□□□ 0.62
SPG11-215ENST00000559193 BMS1Q14692 1282 aaKnown RBP18.92■□□□□ 0.62
SPG11-215ENST00000559193 ESR2Q92731 530 aa18.92■□□□□ 0.62
SPG11-215ENST00000559193 DHX58Q96C10 678 aa18.92■□□□□ 0.62
SPG11-215ENST00000559193 A0A1B0GTH6 734 aa18.92■□□□□ 0.62
SPG11-215ENST00000559193 GOLGA6L9A6NEM1 432 aa18.92■□□□□ 0.62
SPG11-215ENST00000559193 APTXQ7Z2E3 356 aaKnown RBP18.92■□□□□ 0.62
SPG11-215ENST00000559193 ENAHQ8N8S7 591 aaPredicted RBP18.92■□□□□ 0.62
SPG11-215ENST00000559193 EPSTI1Q96J88 318 aa18.92■□□□□ 0.62
SPG11-215ENST00000559193 PHF20Q9BVI0 1012 aa18.92■□□□□ 0.62
SPG11-215ENST00000559193 KAT6BQ8WYB5 2073 aa18.92■□□□□ 0.62
SPG11-215ENST00000559193 DUOX1Q9NRD9 1551 aa18.92■□□□□ 0.62
SPG11-215ENST00000559193 EFCAB8A8MWE9 144 aa18.91■□□□□ 0.62
SPG11-215ENST00000559193 PRDM1O75626 825 aa18.91■□□□□ 0.62
SPG11-215ENST00000559193 GNG11P61952 73 aa18.91■□□□□ 0.62
SPG11-215ENST00000559193 DOT1LQ8TEK3 1739 aa18.91■□□□□ 0.62
SPG11-215ENST00000559193 COL1A1P02452 1464 aaPredicted RBP18.91■□□□□ 0.62
SPG11-215ENST00000559193 hCG_1642624A0A1W2PR95 340 aa18.91■□□□□ 0.62
SPG11-215ENST00000559193 WNT7AO00755 349 aa18.91■□□□□ 0.62
SPG11-215ENST00000559193 CAMTA2O94983 1202 aa18.91■□□□□ 0.62
SPG11-215ENST00000559193 ZRANB2O95218 330 aaKnown RBP eCLIP18.91■□□□□ 0.62
SPG11-215ENST00000559193 NTSR2O95665 410 aa18.91■□□□□ 0.62
SPG11-215ENST00000559193 CCDC87Q9NVE4 849 aa18.91■□□□□ 0.62
SPG11-215ENST00000559193 MYH6P13533 1939 aa18.91■□□□□ 0.62
SPG11-215ENST00000559193 MAGEB6P1A0A0J9YX57 407 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms