RNA–Protein interactions for RNA: ENST00000558635.1

PSMA4-207, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-207ENST00000558635 USP17L21D6R901 530 aa12.42□□□□□ -0.42
PSMA4-207ENST00000558635 CDC45O75419 566 aa12.42□□□□□ -0.42
PSMA4-207ENST00000558635 HLA-DOAP06340 250 aa12.42□□□□□ -0.42
PSMA4-207ENST00000558635 HSPA6P17066 643 aa12.42□□□□□ -0.42
PSMA4-207ENST00000558635 TDO2P48775 406 aa12.42□□□□□ -0.42
PSMA4-207ENST00000558635 PLCD1P51178 756 aa12.42□□□□□ -0.42
PSMA4-207ENST00000558635 FKBP1BP68106 108 aa12.42□□□□□ -0.42
PSMA4-207ENST00000558635 MAP3K10Q02779 954 aa12.42□□□□□ -0.42
PSMA4-207ENST00000558635 GPR153Q6NV75 609 aa12.42□□□□□ -0.42
PSMA4-207ENST00000558635 CTR9Q6PD62 1173 aa12.42□□□□□ -0.42
PSMA4-207ENST00000558635 TTC6Q86TZ1 520 aa12.42□□□□□ -0.42
PSMA4-207ENST00000558635 ZNF341Q9BYN7 854 aa12.42□□□□□ -0.42
PSMA4-207ENST00000558635 NACAP1Q9BZK3 213 aa12.42□□□□□ -0.42
PSMA4-207ENST00000558635 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.42□□□□□ -0.42
PSMA4-207ENST00000558635 PI4KBQ9UBF8 816 aa12.42□□□□□ -0.42
PSMA4-207ENST00000558635 ABT1Q9ULW3 272 aaKnown RBP12.42□□□□□ -0.42
PSMA4-207ENST00000558635 TLL2Q9Y6L7 1015 aa12.42□□□□□ -0.42
PSMA4-207ENST00000558635 RAD50Q92878 1312 aa12.41□□□□□ -0.42
PSMA4-207ENST00000558635 AK9Q5TCS8 1911 aa12.41□□□□□ -0.42
PSMA4-207ENST00000558635 POTEB3A0JP26 581 aa12.41□□□□□ -0.42
PSMA4-207ENST00000558635 FAM196BA6NMK8 535 aa12.41□□□□□ -0.42
PSMA4-207ENST00000558635 SGSM2O43147 1006 aa12.41□□□□□ -0.42
PSMA4-207ENST00000558635 TBC1D12O60347 775 aa12.41□□□□□ -0.42
PSMA4-207ENST00000558635 HSPD1P10809 573 aaKnown RBP12.41□□□□□ -0.42
PSMA4-207ENST00000558635 IREB2P48200 963 aaKnown RBP12.41□□□□□ -0.42
PSMA4-207ENST00000558635 HUNKP57058 714 aa12.41□□□□□ -0.42
PSMA4-207ENST00000558635 HTRA3P83110 453 aa12.41□□□□□ -0.42
PSMA4-207ENST00000558635 MAP3K11Q16584 847 aa12.41□□□□□ -0.42
PSMA4-207ENST00000558635 C12orf60Q5U649 245 aa12.41□□□□□ -0.42
PSMA4-207ENST00000558635 POTEBQ6S5H4 581 aa12.41□□□□□ -0.42
PSMA4-207ENST00000558635 SAPCD2Q86UD0 394 aa12.41□□□□□ -0.42
PSMA4-207ENST00000558635 METTL16Q86W50 562 aaKnown RBP12.41□□□□□ -0.42
PSMA4-207ENST00000558635 FOXP4Q8IVH2 680 aaPredicted RBP12.41□□□□□ -0.42
PSMA4-207ENST00000558635 CRACR2BQ8N4Y2 399 aaPredicted RBP12.41□□□□□ -0.42
PSMA4-207ENST00000558635 KLRG1Q96E93 195 aa12.41□□□□□ -0.42
PSMA4-207ENST00000558635 NAPBQ9H115 298 aa12.41□□□□□ -0.42
PSMA4-207ENST00000558635 CDK5RAP2Q96SN8 1893 aa12.4□□□□□ -0.42
PSMA4-207ENST00000558635 SMIM22K7EJ46 135 aa12.4□□□□□ -0.42
PSMA4-207ENST00000558635 MAP3K9P80192 1104 aa12.4□□□□□ -0.42
PSMA4-207ENST00000558635 ALX1Q15699 326 aa12.4□□□□□ -0.42
PSMA4-207ENST00000558635 SBK1Q52WX2 424 aa12.4□□□□□ -0.42
PSMA4-207ENST00000558635 LDLRAD1Q5T700 205 aa12.4□□□□□ -0.42
PSMA4-207ENST00000558635 AMOTL1Q8IY63 956 aa12.4□□□□□ -0.42
PSMA4-207ENST00000558635 WRNIP1Q96S55 665 aa12.4□□□□□ -0.42
PSMA4-207ENST00000558635 ESYT1Q9BSJ8 1104 aa12.4□□□□□ -0.42
PSMA4-207ENST00000558635 TRIM34Q9BYJ4 488 aa12.4□□□□□ -0.42
PSMA4-207ENST00000558635 EHD4Q9H223 541 aa12.4□□□□□ -0.42
PSMA4-207ENST00000558635 DNAJC18Q9H819 358 aa12.4□□□□□ -0.42
PSMA4-207ENST00000558635 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.4□□□□□ -0.42
PSMA4-207ENST00000558635 ARPP21Q9UBL0 812 aaPredicted RBP12.4□□□□□ -0.42
PSMA4-207ENST00000558635 HERC5Q9UII4 1024 aaKnown RBP12.4□□□□□ -0.42
PSMA4-207ENST00000558635 SERPINB13Q9UIV8 391 aa12.4□□□□□ -0.42
PSMA4-207ENST00000558635 ZNF112Q9UJU3 913 aa12.4□□□□□ -0.42
PSMA4-207ENST00000558635 TRPM7Q96QT4 1865 aa12.4□□□□□ -0.42
PSMA4-207ENST00000558635 FOCADQ5VW36 1801 aa12.39□□□□□ -0.43
PSMA4-207ENST00000558635 PHF20L1A8MW92 1017 aa12.39□□□□□ -0.43
PSMA4-207ENST00000558635 MINDY4BA8MYZ0 360 aa12.39□□□□□ -0.43
PSMA4-207ENST00000558635 FGAP02671 866 aa12.39□□□□□ -0.43
PSMA4-207ENST00000558635 PRKCSHP14314 528 aaPredicted RBP12.39□□□□□ -0.43
PSMA4-207ENST00000558635 INPP5BP32019 993 aa12.39□□□□□ -0.43
PSMA4-207ENST00000558635 CASC1Q6TDU7 716 aa12.39□□□□□ -0.43
PSMA4-207ENST00000558635 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.39□□□□□ -0.43
PSMA4-207ENST00000558635 DYNLL2Q96FJ2 89 aa12.39□□□□□ -0.43
PSMA4-207ENST00000558635 CLMNQ96JQ2 1002 aa12.39□□□□□ -0.43
PSMA4-207ENST00000558635 PAPPA2Q9BXP8 1791 aa12.38□□□□□ -0.43
PSMA4-207ENST00000558635 PTH1RQ03431 593 aa12.38□□□□□ -0.43
PSMA4-207ENST00000558635 GABPAQ06546 454 aa12.38□□□□□ -0.43
PSMA4-207ENST00000558635 RRP1BQ14684 758 aaKnown RBP12.38□□□□□ -0.43
PSMA4-207ENST00000558635 DEFB115Q30KQ5 88 aa12.38□□□□□ -0.43
PSMA4-207ENST00000558635 ARSIQ5FYB1 569 aa12.38□□□□□ -0.43
PSMA4-207ENST00000558635 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.38□□□□□ -0.43
PSMA4-207ENST00000558635 ANKRD13AQ8IZ07 590 aa12.38□□□□□ -0.43
PSMA4-207ENST00000558635 STK11IPQ8N1F8 1099 aa12.38□□□□□ -0.43
PSMA4-207ENST00000558635 ZKSCAN4Q969J2 545 aaPredicted RBP12.38□□□□□ -0.43
PSMA4-207ENST00000558635 DSCC1Q9BVC3 393 aa12.38□□□□□ -0.43
PSMA4-207ENST00000558635 NAV1Q8NEY1 1877 aa12.38□□□□□ -0.43
PSMA4-207ENST00000558635 DDX60LQ5H9U9 1706 aaKnown RBP12.37□□□□□ -0.43
PSMA4-207ENST00000558635 MYH1P12882 1939 aa12.37□□□□□ -0.43
PSMA4-207ENST00000558635 UNCXA6NJT0 531 aa12.37□□□□□ -0.43
PSMA4-207ENST00000558635 RASSF10A6NK89 507 aa12.37□□□□□ -0.43
PSMA4-207ENST00000558635 SHMT1P34896 483 aa12.37□□□□□ -0.43
PSMA4-207ENST00000558635 CDK8P49336 464 aa12.37□□□□□ -0.43
PSMA4-207ENST00000558635 ZNF157P51786 506 aaPredicted RBP12.37□□□□□ -0.43
PSMA4-207ENST00000558635 PPARAQ07869 468 aa12.37□□□□□ -0.43
PSMA4-207ENST00000558635 VGLL4Q14135 290 aa12.37□□□□□ -0.43
PSMA4-207ENST00000558635 RGMBQ6NW40 437 aa12.37□□□□□ -0.43
PSMA4-207ENST00000558635 TATDN1Q6P1N9 297 aa12.37□□□□□ -0.43
PSMA4-207ENST00000558635 C16orf86Q6ZW13 317 aa12.37□□□□□ -0.43
PSMA4-207ENST00000558635 SLC44A5Q8NCS7 719 aa12.37□□□□□ -0.43
PSMA4-207ENST00000558635 SLC10A4Q96EP9 437 aa12.37□□□□□ -0.43
PSMA4-207ENST00000558635 HHIPL1Q96JK4 782 aa12.37□□□□□ -0.43
PSMA4-207ENST00000558635 ELP3Q9H9T3 547 aa12.37□□□□□ -0.43
PSMA4-207ENST00000558635 CSADQ9Y600 493 aa12.37□□□□□ -0.43
PSMA4-207ENST00000558635 ZMYM6O95789 1325 aa12.37□□□□□ -0.43
PSMA4-207ENST00000558635 CTNND1O60716 968 aaKnown RBP12.36□□□□□ -0.43
PSMA4-207ENST00000558635 CAP2P40123 477 aa12.36□□□□□ -0.43
PSMA4-207ENST00000558635 JAG1P78504 1218 aa12.36□□□□□ -0.43
PSMA4-207ENST00000558635 CTDSPL2Q05D32 466 aa12.36□□□□□ -0.43
PSMA4-207ENST00000558635 NOL9Q5SY16 702 aaKnown RBP12.36□□□□□ -0.43
PSMA4-207ENST00000558635 KIAA1211Q6ZU35 1233 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms