RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 MINDY4BA8MYZ0 360 aa14.94□□□□□ -0.02
LRRC28-206ENST00000558471 INHBEP58166 350 aa14.94□□□□□ -0.02
LRRC28-206ENST00000558471 CERKLQ49MI3 558 aaPredicted RBP14.94□□□□□ -0.02
LRRC28-206ENST00000558471 NACAP1Q9BZK3 213 aa14.94□□□□□ -0.02
LRRC28-206ENST00000558471 AFG3L2Q9Y4W6 797 aa14.94□□□□□ -0.02
LRRC28-206ENST00000558471 CCDC171Q6TFL3 1326 aa14.93□□□□□ -0.02
LRRC28-206ENST00000558471 TESPA1A2RU30 521 aaPredicted RBP14.93□□□□□ -0.02
LRRC28-206ENST00000558471 ASNSP08243 561 aa14.93□□□□□ -0.02
LRRC28-206ENST00000558471 HSPD1P10809 573 aaKnown RBP14.93□□□□□ -0.02
LRRC28-206ENST00000558471 CHMLP26374 656 aa14.93□□□□□ -0.02
LRRC28-206ENST00000558471 CDK8P49336 464 aa14.93□□□□□ -0.02
LRRC28-206ENST00000558471 GTF2A2P52657 109 aa14.93□□□□□ -0.02
LRRC28-206ENST00000558471 SREBF2Q12772 1141 aa14.93□□□□□ -0.02
LRRC28-206ENST00000558471 PTPN18Q99952 460 aa14.93□□□□□ -0.02
LRRC28-206ENST00000558471 BEGAINQ9BUH8 593 aa14.93□□□□□ -0.02
LRRC28-206ENST00000558471 NAPBQ9H115 298 aa14.93□□□□□ -0.02
LRRC28-206ENST00000558471 RNF186Q9NXI6 227 aa14.93□□□□□ -0.02
LRRC28-206ENST00000558471 SWAP70Q9UH65 585 aa14.93□□□□□ -0.02
LRRC28-206ENST00000558471 KCNH4Q9UQ05 1017 aa14.93□□□□□ -0.02
LRRC28-206ENST00000558471 PTPRFP10586 1907 aa14.93□□□□□ -0.02
LRRC28-206ENST00000558471 CCL15-CCL14A0A0B4J2E2 113 aa14.92□□□□□ -0.02
LRRC28-206ENST00000558471 FOXN1O15353 648 aa14.92□□□□□ -0.02
LRRC28-206ENST00000558471 GH2P01242 217 aa14.92□□□□□ -0.02
LRRC28-206ENST00000558471 SNAPC2Q13487 334 aa14.92□□□□□ -0.02
LRRC28-206ENST00000558471 ALX1Q15699 326 aa14.92□□□□□ -0.02
LRRC28-206ENST00000558471 CCL15Q16663 113 aa14.92□□□□□ -0.02
LRRC28-206ENST00000558471 ABCB5Q2M3G0 1257 aa14.92□□□□□ -0.02
LRRC28-206ENST00000558471 C16orf86Q6ZW13 317 aa14.92□□□□□ -0.02
LRRC28-206ENST00000558471 IFNL1Q8IU54 200 aa14.92□□□□□ -0.02
LRRC28-206ENST00000558471 STK11IPQ8N1F8 1099 aa14.92□□□□□ -0.02
LRRC28-206ENST00000558471 BRI3BPQ8WY22 251 aa14.92□□□□□ -0.02
LRRC28-206ENST00000558471 IL25Q9H293 177 aa14.92□□□□□ -0.02
LRRC28-206ENST00000558471 GINM1Q9NU53 330 aa14.92□□□□□ -0.02
LRRC28-206ENST00000558471 TAOK2Q9UL54 1235 aa14.92□□□□□ -0.02
LRRC28-206ENST00000558471 ZBTB21Q9ULJ3 1066 aa14.92□□□□□ -0.02
LRRC28-206ENST00000558471 USP17L5A8MUK1 530 aa14.91□□□□□ -0.02
LRRC28-206ENST00000558471 IGF2BP3O00425 579 aaKnown RBP eCLIP14.91□□□□□ -0.02
LRRC28-206ENST00000558471 CXCL11O14625 94 aa14.91□□□□□ -0.02
LRRC28-206ENST00000558471 TRPA1O75762 1119 aa14.91□□□□□ -0.02
LRRC28-206ENST00000558471 FGAP02671 866 aa14.91□□□□□ -0.02
LRRC28-206ENST00000558471 CETPP11597 493 aa14.91□□□□□ -0.02
LRRC28-206ENST00000558471 MFAP1P55081 439 aaKnown RBP14.91□□□□□ -0.02
LRRC28-206ENST00000558471 SPP2Q13103 211 aa14.91□□□□□ -0.02
LRRC28-206ENST00000558471 BMP2KLQ5H9B9 411 aa14.91□□□□□ -0.02
LRRC28-206ENST00000558471 TSKSQ9UJT2 592 aa14.91□□□□□ -0.02
LRRC28-206ENST00000558471 TRIM75PA6NK02 468 aa14.9□□□□□ -0.02
LRRC28-206ENST00000558471 GUCY1A2P33402 732 aa14.9□□□□□ -0.02
LRRC28-206ENST00000558471 PPARAQ07869 468 aa14.9□□□□□ -0.02
LRRC28-206ENST00000558471 MOGSQ13724 837 aa14.9□□□□□ -0.02
LRRC28-206ENST00000558471 ZNF280CQ8ND82 737 aa14.9□□□□□ -0.02
LRRC28-206ENST00000558471 WDR18Q9BV38 432 aa14.9□□□□□ -0.02
LRRC28-206ENST00000558471 CABP5Q9NP86 173 aa14.9□□□□□ -0.02
LRRC28-206ENST00000558471 ROBO3Q96MS0 1386 aa14.89□□□□□ -0.03
LRRC28-206ENST00000558471 MPHOSPH10O00566 681 aaKnown RBP14.89□□□□□ -0.03
LRRC28-206ENST00000558471 CA12O43570 354 aa14.89□□□□□ -0.03
LRRC28-206ENST00000558471 AKR1B1P15121 316 aa14.89□□□□□ -0.03
LRRC28-206ENST00000558471 RAB3GAP1Q15042 981 aa14.89□□□□□ -0.03
LRRC28-206ENST00000558471 FAM43AQ8N2R8 423 aa14.89□□□□□ -0.03
LRRC28-206ENST00000558471 RUFY2Q8WXA3 655 aa14.89□□□□□ -0.03
LRRC28-206ENST00000558471 CCDC17Q96LX7 622 aa14.89□□□□□ -0.03
LRRC28-206ENST00000558471 TBC1D2Q9BYX2 928 aa14.89□□□□□ -0.03
LRRC28-206ENST00000558471 AS3MTQ9HBK9 375 aa14.89□□□□□ -0.03
LRRC28-206ENST00000558471 SAGE1Q9NXZ1 904 aa14.89□□□□□ -0.03
LRRC28-206ENST00000558471 A0A0G2JLL6 359 aaPredicted RBP14.88□□□□□ -0.03
LRRC28-206ENST00000558471 BTBD19C9JJ37 291 aa14.88□□□□□ -0.03
LRRC28-206ENST00000558471 TBC1D8O95759 1140 aa14.88□□□□□ -0.03
LRRC28-206ENST00000558471 HSPA8P11142 646 aaKnown RBP14.88□□□□□ -0.03
LRRC28-206ENST00000558471 RASA1P20936 1047 aa14.88□□□□□ -0.03
LRRC28-206ENST00000558471 CTCFP49711 727 aaPredicted RBP14.88□□□□□ -0.03
LRRC28-206ENST00000558471 CTDSPL2Q05D32 466 aa14.88□□□□□ -0.03
LRRC28-206ENST00000558471 SEPT2Q15019 361 aa14.88□□□□□ -0.03
LRRC28-206ENST00000558471 OTUD7BQ6GQQ9 843 aa14.88□□□□□ -0.03
LRRC28-206ENST00000558471 PRRT2Q7Z6L0 340 aaPredicted RBP14.88□□□□□ -0.03
LRRC28-206ENST00000558471 MKNK2Q9HBH9 465 aa14.88□□□□□ -0.03
LRRC28-206ENST00000558471 INCENPQ9NQS7 918 aa14.88□□□□□ -0.03
LRRC28-206ENST00000558471 ANAPC4Q9UJX5 808 aa14.88□□□□□ -0.03
LRRC28-206ENST00000558471 RAD50Q92878 1312 aa14.88□□□□□ -0.03
LRRC28-206ENST00000558471 SGSM2O43147 1006 aa14.87□□□□□ -0.03
LRRC28-206ENST00000558471 PRDM1O75626 825 aa14.87□□□□□ -0.03
LRRC28-206ENST00000558471 ALDH1A1P00352 501 aa14.87□□□□□ -0.03
LRRC28-206ENST00000558471 SLC3A2P08195 630 aaKnown RBP14.87□□□□□ -0.03
LRRC28-206ENST00000558471 GPAT2Q6NUI2 795 aa14.87□□□□□ -0.03
LRRC28-206ENST00000558471 TMEM179Q6ZVK1 233 aa14.87□□□□□ -0.03
LRRC28-206ENST00000558471 DSCC1Q9BVC3 393 aa14.87□□□□□ -0.03
LRRC28-206ENST00000558471 R3HDMLQ9H3Y0 253 aa14.87□□□□□ -0.03
LRRC28-206ENST00000558471 TACC3Q9Y6A5 838 aa14.87□□□□□ -0.03
LRRC28-206ENST00000558471 CASP8AP2Q9UKL3 1982 aa14.87□□□□□ -0.03
LRRC28-206ENST00000558471 ZMYM6O95789 1325 aa14.87□□□□□ -0.03
LRRC28-206ENST00000558471 USP17L10C9JJH3 530 aa14.86□□□□□ -0.03
LRRC28-206ENST00000558471 LBX1P52954 281 aa14.86□□□□□ -0.03
LRRC28-206ENST00000558471 HMGCS2P54868 508 aa14.86□□□□□ -0.03
LRRC28-206ENST00000558471 BACE1P56817 501 aa14.86□□□□□ -0.03
LRRC28-206ENST00000558471 PDE4BQ07343 736 aa14.86□□□□□ -0.03
LRRC28-206ENST00000558471 DGKZQ13574 1117 aa14.86□□□□□ -0.03
LRRC28-206ENST00000558471 MTMR2Q13614 643 aa14.86□□□□□ -0.03
LRRC28-206ENST00000558471 SH3D19Q5HYK7 790 aa14.86□□□□□ -0.03
LRRC28-206ENST00000558471 GADL1Q6ZQY3 521 aa14.86□□□□□ -0.03
LRRC28-206ENST00000558471 FASTKD5Q7L8L6 764 aaKnown RBP14.86□□□□□ -0.03
LRRC28-206ENST00000558471 ANKRD23Q86SG2 305 aa14.86□□□□□ -0.03
LRRC28-206ENST00000558471 SIAH1Q8IUQ4 282 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms