RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 TSPY2A6NKD2 308 aa13.04□□□□□ -0.32
CSPG4P12-201ENST00000558282 TRAF1Q13077 416 aa13.04□□□□□ -0.32
CSPG4P12-201ENST00000558282 POSTNQ15063 836 aa13.04□□□□□ -0.32
CSPG4P12-201ENST00000558282 RUNDC3BQ96NL0 473 aa13.04□□□□□ -0.32
CSPG4P12-201ENST00000558282 DRC3Q9H069 523 aa13.04□□□□□ -0.32
CSPG4P12-201ENST00000558282 XAB2Q9HCS7 855 aaKnown RBP13.04□□□□□ -0.32
CSPG4P12-201ENST00000558282 INTS9Q9NV88 658 aaKnown RBP13.04□□□□□ -0.32
CSPG4P12-201ENST00000558282 ARHGEF11O15085 1522 aa13.04□□□□□ -0.32
CSPG4P12-201ENST00000558282 NUP160Q12769 1436 aa13.04□□□□□ -0.32
CSPG4P12-201ENST00000558282 ARHGAP42A6NI28 874 aa13.04□□□□□ -0.32
CSPG4P12-201ENST00000558282 TNFAIP3P21580 790 aa13.04□□□□□ -0.32
CSPG4P12-201ENST00000558282 PEX26Q7Z412 305 aa13.04□□□□□ -0.32
CSPG4P12-201ENST00000558282 ANKRD42Q8N9B4 389 aa13.04□□□□□ -0.32
CSPG4P12-201ENST00000558282 ANTXR1Q9H6X2 564 aa13.04□□□□□ -0.32
CSPG4P12-201ENST00000558282 GPATCH8Q9UKJ3 1502 aaKnown RBP13.03□□□□□ -0.32
CSPG4P12-201ENST00000558282 SPECC1L-ADORA2AF8WAN1 911 aa13.03□□□□□ -0.32
CSPG4P12-201ENST00000558282 MAP3K7O43318 606 aa13.03□□□□□ -0.32
CSPG4P12-201ENST00000558282 UAP1Q16222 522 aaPredicted RBP13.03□□□□□ -0.32
CSPG4P12-201ENST00000558282 NME8Q8N427 588 aa13.03□□□□□ -0.32
CSPG4P12-201ENST00000558282 SOS1Q07889 1333 aaPredicted RBP13.03□□□□□ -0.32
CSPG4P12-201ENST00000558282 TTC36A6NLP5 189 aa13.03□□□□□ -0.32
CSPG4P12-201ENST00000558282 CASP8Q14790 479 aa13.03□□□□□ -0.32
CSPG4P12-201ENST00000558282 IFIT1BQ5T764 474 aaKnown RBP13.03□□□□□ -0.32
CSPG4P12-201ENST00000558282 GFM2Q969S9 779 aaKnown RBP13.03□□□□□ -0.32
CSPG4P12-201ENST00000558282 TTC21BQ7Z4L5 1316 aa13.03□□□□□ -0.32
CSPG4P12-201ENST00000558282 ADKP55263 362 aaKnown RBP13.03□□□□□ -0.32
CSPG4P12-201ENST00000558282 PHEXP78562 749 aa13.03□□□□□ -0.32
CSPG4P12-201ENST00000558282 PSMD6Q15008 389 aa13.03□□□□□ -0.32
CSPG4P12-201ENST00000558282 RNF14Q9UBS8 474 aa13.03□□□□□ -0.32
CSPG4P12-201ENST00000558282 ANGPTL2Q9UKU9 493 aa13.03□□□□□ -0.32
CSPG4P12-201ENST00000558282 CCDC61Q9Y6R9 512 aa13.03□□□□□ -0.32
CSPG4P12-201ENST00000558282 CAPRIN2Q6IMN6 1127 aaKnown RBP13.02□□□□□ -0.32
CSPG4P12-201ENST00000558282 SPINK5Q9NQ38 1064 aaPredicted RBP13.02□□□□□ -0.32
CSPG4P12-201ENST00000558282 RNASE9P60153 205 aaKnown RBP13.02□□□□□ -0.32
CSPG4P12-201ENST00000558282 RILPQ96NA2 401 aa13.02□□□□□ -0.32
CSPG4P12-201ENST00000558282 DUOX2Q9NRD8 1548 aa13.02□□□□□ -0.32
CSPG4P12-201ENST00000558282 CCDC105Q8IYK2 499 aa13.02□□□□□ -0.33
CSPG4P12-201ENST00000558282 ZBTB7BO15156 539 aaPredicted RBP13.02□□□□□ -0.33
CSPG4P12-201ENST00000558282 PSMD7P51665 324 aa13.02□□□□□ -0.33
CSPG4P12-201ENST00000558282 ITIH3Q06033 890 aa13.02□□□□□ -0.33
CSPG4P12-201ENST00000558282 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.02□□□□□ -0.33
CSPG4P12-201ENST00000558282 SV2BQ7L1I2 683 aa13.02□□□□□ -0.33
CSPG4P12-201ENST00000558282 SLF2Q8IX21 1173 aa13.02□□□□□ -0.33
CSPG4P12-201ENST00000558282 CNPY4Q8N129 248 aa13.02□□□□□ -0.33
CSPG4P12-201ENST00000558282 NLRP7Q8WX94 980 aa13.02□□□□□ -0.33
CSPG4P12-201ENST00000558282 KIFAP3Q92845 792 aa13.02□□□□□ -0.33
CSPG4P12-201ENST00000558282 IMPG2Q9BZV3 1241 aa13.02□□□□□ -0.33
CSPG4P12-201ENST00000558282 C6orf50Q9HD87 102 aa13.02□□□□□ -0.33
CSPG4P12-201ENST00000558282 ZC4H2Q9NQZ6 224 aa13.02□□□□□ -0.33
CSPG4P12-201ENST00000558282 MAP3K2Q9Y2U5 619 aa13.02□□□□□ -0.33
CSPG4P12-201ENST00000558282 RANBP1P43487 201 aa13.01□□□□□ -0.33
CSPG4P12-201ENST00000558282 IL9RQ01113 521 aa13.01□□□□□ -0.33
CSPG4P12-201ENST00000558282 ANKRD20A4Q4UJ75 823 aa13.01□□□□□ -0.33
CSPG4P12-201ENST00000558282 ANKRD20A8PQ5CZ79 823 aa13.01□□□□□ -0.33
CSPG4P12-201ENST00000558282 ANKRD20A2Q5SQ80 823 aa13.01□□□□□ -0.33
CSPG4P12-201ENST00000558282 ANKRD20A1Q5TYW2 823 aa13.01□□□□□ -0.33
CSPG4P12-201ENST00000558282 SGSM2O43147 1006 aa13.01□□□□□ -0.33
CSPG4P12-201ENST00000558282 GJC1P36383 396 aa13.01□□□□□ -0.33
CSPG4P12-201ENST00000558282 SRLQ86TD4 932 aa13.01□□□□□ -0.33
CSPG4P12-201ENST00000558282 MGARPQ8TDB4 240 aa13.01□□□□□ -0.33
CSPG4P12-201ENST00000558282 TAB2Q9NYJ8 693 aa13.01□□□□□ -0.33
CSPG4P12-201ENST00000558282 TRAF5O00463 557 aa13.01□□□□□ -0.33
CSPG4P12-201ENST00000558282 CACTINQ8WUQ7 758 aaKnown RBP13.01□□□□□ -0.33
CSPG4P12-201ENST00000558282 TYW1Q9NV66 732 aaKnown RBP13.01□□□□□ -0.33
CSPG4P12-201ENST00000558282 PI4KAP2A4QPH2 592 aa13.01□□□□□ -0.33
CSPG4P12-201ENST00000558282 DEUP1Q05D60 604 aa13.01□□□□□ -0.33
CSPG4P12-201ENST00000558282 PI4KAP1Q8N8J0 262 aa13.01□□□□□ -0.33
CSPG4P12-201ENST00000558282 NUP153P49790 1475 aaKnown RBP13.01□□□□□ -0.33
CSPG4P12-201ENST00000558282 POLR2DO15514 142 aaKnown RBP13□□□□□ -0.33
CSPG4P12-201ENST00000558282 SFMBT2Q5VUG0 894 aa13□□□□□ -0.33
CSPG4P12-201ENST00000558282 TRAF3IP1Q8TDR0 691 aaPredicted RBP13□□□□□ -0.33
CSPG4P12-201ENST00000558282 OSBPL9Q96SU4 736 aa13□□□□□ -0.33
CSPG4P12-201ENST00000558282 NAP1L4Q99733 375 aaKnown RBP13□□□□□ -0.33
CSPG4P12-201ENST00000558282 DESI2Q9BSY9 194 aa13□□□□□ -0.33
CSPG4P12-201ENST00000558282 HAUS8Q9BT25 410 aa13□□□□□ -0.33
CSPG4P12-201ENST00000558282 EPB41P11171 864 aaKnown RBP13□□□□□ -0.33
CSPG4P12-201ENST00000558282 CDC37L1Q7L3B6 337 aa13□□□□□ -0.33
CSPG4P12-201ENST00000558282 SPDL1Q96EA4 605 aa13□□□□□ -0.33
CSPG4P12-201ENST00000558282 RRP36Q96EU6 259 aaKnown RBP13□□□□□ -0.33
CSPG4P12-201ENST00000558282 YIPF3Q9GZM5 350 aa13□□□□□ -0.33
CSPG4P12-201ENST00000558282 AMFRQ9UKV5 643 aa13□□□□□ -0.33
CSPG4P12-201ENST00000558282 PAIP2BQ9ULR5 123 aaKnown RBP13□□□□□ -0.33
CSPG4P12-201ENST00000558282 AMOTL2Q9Y2J4 779 aa13□□□□□ -0.33
CSPG4P12-201ENST00000558282 DISP3Q9P2K9 1392 aa13□□□□□ -0.33
CSPG4P12-201ENST00000558282 FAM13AO94988 1023 aa13□□□□□ -0.33
CSPG4P12-201ENST00000558282 GNAT2P19087 354 aa13□□□□□ -0.33
CSPG4P12-201ENST00000558282 ST5P78524 1137 aa13□□□□□ -0.33
CSPG4P12-201ENST00000558282 KLHL30Q0D2K2 578 aa13□□□□□ -0.33
CSPG4P12-201ENST00000558282 ATP2A3Q93084 1043 aa13□□□□□ -0.33
CSPG4P12-201ENST00000558282 HELLSQ9NRZ9 838 aa13□□□□□ -0.33
CSPG4P12-201ENST00000558282 RNF113AO15541 343 aaKnown RBP13□□□□□ -0.33
CSPG4P12-201ENST00000558282 LDHCP07864 332 aa13□□□□□ -0.33
CSPG4P12-201ENST00000558282 PDE4DQ08499 809 aa13□□□□□ -0.33
CSPG4P12-201ENST00000558282 CCDC13Q8IYE1 715 aa13□□□□□ -0.33
CSPG4P12-201ENST00000558282 CXorf38Q8TB03 319 aa13□□□□□ -0.33
CSPG4P12-201ENST00000558282 LRRC8CQ8TDW0 803 aa13□□□□□ -0.33
CSPG4P12-201ENST00000558282 IKBKBO14920 756 aa12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 STARD3NLO95772 234 aa12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 CYP2C19P33261 490 aa12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 NNTQ13423 1086 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms