RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 TRIM17Q9Y577 477 aa12.32□□□□□ -0.44
USP3-207ENST00000558218 ZHX2Q9Y6X8 837 aa12.32□□□□□ -0.44
USP3-207ENST00000558218 POTEB3A0JP26 581 aa12.31□□□□□ -0.44
USP3-207ENST00000558218 KIF22Q14807 665 aa12.31□□□□□ -0.44
USP3-207ENST00000558218 POTEBQ6S5H4 581 aa12.31□□□□□ -0.44
USP3-207ENST00000558218 OTOP1Q7RTM1 612 aa12.31□□□□□ -0.44
USP3-207ENST00000558218 METTL16Q86W50 562 aaKnown RBP12.31□□□□□ -0.44
USP3-207ENST00000558218 PLPP6Q8IY26 295 aa12.31□□□□□ -0.44
USP3-207ENST00000558218 SH3RF3Q8TEJ3 882 aaPredicted RBP12.31□□□□□ -0.44
USP3-207ENST00000558218 EFCC1Q9HA90 598 aa12.31□□□□□ -0.44
USP3-207ENST00000558218 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.31□□□□□ -0.44
USP3-207ENST00000558218 PIH1D3Q9NQM4 214 aaKnown RBP12.31□□□□□ -0.44
USP3-207ENST00000558218 AATFQ9NY61 560 aaKnown RBP eCLIP12.31□□□□□ -0.44
USP3-207ENST00000558218 TLR7Q9NYK1 1049 aaKnown RBP12.31□□□□□ -0.44
USP3-207ENST00000558218 PTPN22Q9Y2R2 807 aa12.31□□□□□ -0.44
USP3-207ENST00000558218 DOCK2Q92608 1830 aa12.3□□□□□ -0.44
USP3-207ENST00000558218 A0A0G2JLL6 359 aaPredicted RBP12.3□□□□□ -0.44
USP3-207ENST00000558218 PDHXO00330 501 aa12.3□□□□□ -0.44
USP3-207ENST00000558218 IFIT2P09913 472 aaKnown RBP12.3□□□□□ -0.44
USP3-207ENST00000558218 CYP7A1P22680 504 aa12.3□□□□□ -0.44
USP3-207ENST00000558218 PRMT2P55345 433 aa12.3□□□□□ -0.44
USP3-207ENST00000558218 MOGSQ13724 837 aa12.3□□□□□ -0.44
USP3-207ENST00000558218 C17orf99Q6UX52 265 aa12.3□□□□□ -0.44
USP3-207ENST00000558218 PRRT2Q7Z6L0 340 aaPredicted RBP12.3□□□□□ -0.44
USP3-207ENST00000558218 SPRYD3Q8NCJ5 442 aa12.3□□□□□ -0.44
USP3-207ENST00000558218 IL1RAPL2Q9NP60 686 aa12.3□□□□□ -0.44
USP3-207ENST00000558218 GPHNQ9NQX3 736 aaPredicted RBP12.3□□□□□ -0.44
USP3-207ENST00000558218 IDH1O75874 414 aaKnown RBP12.29□□□□□ -0.44
USP3-207ENST00000558218 HOXB1P14653 301 aaPredicted RBP12.29□□□□□ -0.44
USP3-207ENST00000558218 CAP2P40123 477 aa12.29□□□□□ -0.44
USP3-207ENST00000558218 ADGRA1Q86SQ6 560 aa12.29□□□□□ -0.44
USP3-207ENST00000558218 CD99L2Q8TCZ2 262 aa12.29□□□□□ -0.44
USP3-207ENST00000558218 TGFBRAP1Q8WUH2 860 aa12.29□□□□□ -0.44
USP3-207ENST00000558218 HOXD10P28358 340 aa12.28□□□□□ -0.44
USP3-207ENST00000558218 LACTBP83111 547 aaPredicted RBP12.28□□□□□ -0.44
USP3-207ENST00000558218 GPAT2Q6NUI2 795 aa12.28□□□□□ -0.44
USP3-207ENST00000558218 GPR153Q6NV75 609 aa12.28□□□□□ -0.44
USP3-207ENST00000558218 MAGEB6Q8N7X4 407 aa12.28□□□□□ -0.44
USP3-207ENST00000558218 PARK7Q99497 189 aaKnown RBP12.28□□□□□ -0.44
USP3-207ENST00000558218 MAST2Q6P0Q8 1798 aa12.28□□□□□ -0.44
USP3-207ENST00000558218 USP17L5A8MUK1 530 aa12.27□□□□□ -0.45
USP3-207ENST00000558218 HLA-DOAP06340 250 aa12.27□□□□□ -0.45
USP3-207ENST00000558218 ASNSP08243 561 aa12.27□□□□□ -0.45
USP3-207ENST00000558218 ATP5JP18859 108 aa12.27□□□□□ -0.45
USP3-207ENST00000558218 C20orf194Q5TEA3 1177 aa12.27□□□□□ -0.45
USP3-207ENST00000558218 NBPF11Q86T75 865 aa12.27□□□□□ -0.45
USP3-207ENST00000558218 TTC6Q86TZ1 520 aa12.27□□□□□ -0.45
USP3-207ENST00000558218 PROCA1Q8NCQ7 364 aaPredicted RBP12.27□□□□□ -0.45
USP3-207ENST00000558218 ZNF280CQ8ND82 737 aa12.27□□□□□ -0.45
USP3-207ENST00000558218 ARMC5Q96C12 935 aa12.27□□□□□ -0.45
USP3-207ENST00000558218 WDR18Q9BV38 432 aa12.27□□□□□ -0.45
USP3-207ENST00000558218 LRRCC1Q9C099 1032 aa12.27□□□□□ -0.45
USP3-207ENST00000558218 ANTXR1Q9H6X2 564 aa12.27□□□□□ -0.45
USP3-207ENST00000558218 DCTPP1Q9H773 170 aa12.27□□□□□ -0.45
USP3-207ENST00000558218 AS3MTQ9HBK9 375 aa12.27□□□□□ -0.45
USP3-207ENST00000558218 FLT1P17948 1338 aa12.27□□□□□ -0.45
USP3-207ENST00000558218 MYO5AQ9Y4I1 1855 aaKnown RBP12.27□□□□□ -0.45
USP3-207ENST00000558218 USP5P45974 858 aa12.26□□□□□ -0.45
USP3-207ENST00000558218 FOXK1P85037 733 aa12.26□□□□□ -0.45
USP3-207ENST00000558218 PABPC4Q13310 644 aaKnown RBP eCLIP12.26□□□□□ -0.45
USP3-207ENST00000558218 SH3D19Q5HYK7 790 aa12.26□□□□□ -0.45
USP3-207ENST00000558218 SLC9C2Q5TAH2 1124 aa12.26□□□□□ -0.45
USP3-207ENST00000558218 MAPKAPK5Q8IW41 473 aa12.26□□□□□ -0.45
USP3-207ENST00000558218 CRACR2BQ8N4Y2 399 aaPredicted RBP12.26□□□□□ -0.45
USP3-207ENST00000558218 HS3ST6Q96QI5 342 aa12.26□□□□□ -0.45
USP3-207ENST00000558218 LARP6Q9BRS8 491 aaKnown RBP12.26□□□□□ -0.45
USP3-207ENST00000558218 TRIM34Q9BYJ4 488 aa12.26□□□□□ -0.45
USP3-207ENST00000558218 CRISPLD2Q9H0B8 497 aa12.26□□□□□ -0.45
USP3-207ENST00000558218 EHD4Q9H223 541 aa12.26□□□□□ -0.45
USP3-207ENST00000558218 ADGRA2Q96PE1 1338 aa12.26□□□□□ -0.45
USP3-207ENST00000558218 DOCK1Q14185 1865 aa12.25□□□□□ -0.45
USP3-207ENST00000558218 C19orf81C9J6K1 198 aa12.25□□□□□ -0.45
USP3-207ENST00000558218 BCRP11274 1271 aa12.25□□□□□ -0.45
USP3-207ENST00000558218 DYNLL1P63167 89 aaKnown RBP12.25□□□□□ -0.45
USP3-207ENST00000558218 SPP2Q13103 211 aa12.25□□□□□ -0.45
USP3-207ENST00000558218 HAUS7Q99871 368 aa12.25□□□□□ -0.45
USP3-207ENST00000558218 RIOK1Q9BRS2 568 aaKnown RBP12.25□□□□□ -0.45
USP3-207ENST00000558218 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.25□□□□□ -0.45
USP3-207ENST00000558218 PNMA3Q9UL41 463 aa12.25□□□□□ -0.45
USP3-207ENST00000558218 PALD1Q9ULE6 856 aa12.25□□□□□ -0.45
USP3-207ENST00000558218 AGTPBP1Q9UPW5 1226 aa12.25□□□□□ -0.45
USP3-207ENST00000558218 FOCADQ5VW36 1801 aa12.25□□□□□ -0.45
USP3-207ENST00000558218 MAGEB6P1A0A0J9YX57 407 aa12.24□□□□□ -0.45
USP3-207ENST00000558218 TRIM75PA6NK02 468 aa12.24□□□□□ -0.45
USP3-207ENST00000558218 APBB1O00213 710 aa12.24□□□□□ -0.45
USP3-207ENST00000558218 NUDT7P0C024 238 aa12.24□□□□□ -0.45
USP3-207ENST00000558218 PDE6AP16499 860 aa12.24□□□□□ -0.45
USP3-207ENST00000558218 TATDN1Q6P1N9 297 aa12.24□□□□□ -0.45
USP3-207ENST00000558218 GADL1Q6ZQY3 521 aa12.24□□□□□ -0.45
USP3-207ENST00000558218 MIGA1Q8NAN2 632 aa12.24□□□□□ -0.45
USP3-207ENST00000558218 PHIPQ8WWQ0 1821 aa12.24□□□□□ -0.45
USP3-207ENST00000558218 CRNKL1Q9BZJ0 848 aaKnown RBP12.24□□□□□ -0.45
USP3-207ENST00000558218 PAG1Q9NWQ8 432 aa12.24□□□□□ -0.45
USP3-207ENST00000558218 CPA4Q9UI42 421 aa12.24□□□□□ -0.45
USP3-207ENST00000558218 SERPINB13Q9UIV8 391 aa12.24□□□□□ -0.45
USP3-207ENST00000558218 CDK5RAP2Q96SN8 1893 aa12.23□□□□□ -0.45
USP3-207ENST00000558218 FAM196BA6NMK8 535 aa12.23□□□□□ -0.45
USP3-207ENST00000558218 GOLIM4O00461 696 aa12.23□□□□□ -0.45
USP3-207ENST00000558218 SLURP2P0DP57 97 aa12.23□□□□□ -0.45
USP3-207ENST00000558218 OSBPP22059 807 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms