RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 JAG1P78504 1218 aa30.44■■■□□ 2.46
SMAD6-202ENST00000557916 STK11IPQ8N1F8 1099 aa30.44■■■□□ 2.46
SMAD6-202ENST00000557916 DSCC1Q9BVC3 393 aa30.44■■■□□ 2.46
SMAD6-202ENST00000557916 FRMD4AQ9P2Q2 1039 aaPredicted RBP30.44■■■□□ 2.46
SMAD6-202ENST00000557916 ASNSP08243 561 aa30.43■■■□□ 2.46
SMAD6-202ENST00000557916 PPIL2Q13356 520 aa30.43■■■□□ 2.46
SMAD6-202ENST00000557916 CASC1Q6TDU7 716 aa30.43■■■□□ 2.46
SMAD6-202ENST00000557916 ZHX2Q9Y6X8 837 aa30.43■■■□□ 2.46
SMAD6-202ENST00000557916 SLC3A2P08195 630 aaKnown RBP30.42■■■□□ 2.46
SMAD6-202ENST00000557916 DOCK1Q14185 1865 aa30.42■■■□□ 2.46
SMAD6-202ENST00000557916 ABCB5Q2M3G0 1257 aa30.42■■■□□ 2.46
SMAD6-202ENST00000557916 SHROOM1Q2M3G4 852 aaPredicted RBP30.42■■■□□ 2.46
SMAD6-202ENST00000557916 GINM1Q9NU53 330 aa30.42■■■□□ 2.46
SMAD6-202ENST00000557916 GTF3C3Q9Y5Q9 886 aa30.42■■■□□ 2.46
SMAD6-202ENST00000557916 IRF6O14896 467 aa30.41■■■□□ 2.46
SMAD6-202ENST00000557916 GH2P01242 217 aa30.41■■■□□ 2.46
SMAD6-202ENST00000557916 JMYQ8N9B5 988 aa30.41■■■□□ 2.46
SMAD6-202ENST00000557916 ESYT1Q9BSJ8 1104 aa30.41■■■□□ 2.46
SMAD6-202ENST00000557916 ZBTB21Q9ULJ3 1066 aa30.41■■■□□ 2.46
SMAD6-202ENST00000557916 CCDC84Q86UT8 332 aaPredicted RBP30.4■■■□□ 2.46
SMAD6-202ENST00000557916 MKNK2Q9HBH9 465 aa30.4■■■□□ 2.46
SMAD6-202ENST00000557916 CABP5Q9NP86 173 aa30.4■■■□□ 2.46
SMAD6-202ENST00000557916 LAMB1P07942 1786 aa30.4■■■□□ 2.46
SMAD6-202ENST00000557916 MANSC4A6NHS7 340 aaPredicted RBP30.39■■■□□ 2.46
SMAD6-202ENST00000557916 USP17L5A8MUK1 530 aa30.39■■■□□ 2.46
SMAD6-202ENST00000557916 CTDSPL2Q05D32 466 aa30.39■■■□□ 2.46
SMAD6-202ENST00000557916 ZNF287Q9HBT7 754 aa30.39■■■□□ 2.46
SMAD6-202ENST00000557916 ANAPC4Q9UJX5 808 aa30.39■■■□□ 2.46
SMAD6-202ENST00000557916 THSD7BQ9C0I4 1608 aa30.39■■■□□ 2.46
SMAD6-202ENST00000557916 MPHOSPH10O00566 681 aaKnown RBP30.39■■■□□ 2.45
SMAD6-202ENST00000557916 GTF2A2P52657 109 aa30.39■■■□□ 2.45
SMAD6-202ENST00000557916 PDE4BQ07343 736 aa30.39■■■□□ 2.45
SMAD6-202ENST00000557916 REM2Q8IYK8 340 aaPredicted RBP30.39■■■□□ 2.45
SMAD6-202ENST00000557916 CCDC17Q96LX7 622 aa30.39■■■□□ 2.45
SMAD6-202ENST00000557916 PTH1RQ03431 593 aa30.38■■■□□ 2.45
SMAD6-202ENST00000557916 CTNNA3Q9UI47 895 aa30.38■■■□□ 2.45
SMAD6-202ENST00000557916 AFG3L2Q9Y4W6 797 aa30.38■■■□□ 2.45
SMAD6-202ENST00000557916 PRDM1O75626 825 aa30.37■■■□□ 2.45
SMAD6-202ENST00000557916 HAND2P61296 217 aa30.37■■■□□ 2.45
SMAD6-202ENST00000557916 SREBF2Q12772 1141 aa30.37■■■□□ 2.45
SMAD6-202ENST00000557916 SNAPC2Q13487 334 aa30.37■■■□□ 2.45
SMAD6-202ENST00000557916 RAB3GAP1Q15042 981 aa30.37■■■□□ 2.45
SMAD6-202ENST00000557916 KIAA1211Q6ZU35 1233 aa30.37■■■□□ 2.45
SMAD6-202ENST00000557916 MS4A4AQ96JQ5 239 aa30.37■■■□□ 2.45
SMAD6-202ENST00000557916 TBC1D2Q9BYX2 928 aa30.37■■■□□ 2.45
SMAD6-202ENST00000557916 KCNH4Q9UQ05 1017 aa30.37■■■□□ 2.45
SMAD6-202ENST00000557916 ATAD5Q96QE3 1844 aa30.37■■■□□ 2.45
SMAD6-202ENST00000557916 AKR1B1P15121 316 aa30.36■■■□□ 2.45
SMAD6-202ENST00000557916 RASA1P20936 1047 aa30.36■■■□□ 2.45
SMAD6-202ENST00000557916 INHBEP58166 350 aa30.36■■■□□ 2.45
SMAD6-202ENST00000557916 MAP2K1Q02750 393 aaPredicted RBP30.36■■■□□ 2.45
SMAD6-202ENST00000557916 AS3MTQ9HBK9 375 aa30.36■■■□□ 2.45
SMAD6-202ENST00000557916 CXCL11O14625 94 aa30.35■■■□□ 2.45
SMAD6-202ENST00000557916 ZNF213O14771 459 aa30.35■■■□□ 2.45
SMAD6-202ENST00000557916 ZNF444Q8N0Y2 327 aaPredicted RBP30.35■■■□□ 2.45
SMAD6-202ENST00000557916 TRIM75PA6NK02 468 aa30.34■■■□□ 2.45
SMAD6-202ENST00000557916 TM4SF4P48230 202 aa30.34■■■□□ 2.45
SMAD6-202ENST00000557916 SPP2Q13103 211 aa30.34■■■□□ 2.45
SMAD6-202ENST00000557916 TMEM179Q6ZVK1 233 aa30.34■■■□□ 2.45
SMAD6-202ENST00000557916 ZNF280CQ8ND82 737 aa30.34■■■□□ 2.45
SMAD6-202ENST00000557916 CCL15-CCL14A0A0B4J2E2 113 aa30.33■■■□□ 2.45
SMAD6-202ENST00000557916 CETPP11597 493 aa30.33■■■□□ 2.45
SMAD6-202ENST00000557916 GUCY1A2P33402 732 aa30.33■■■□□ 2.45
SMAD6-202ENST00000557916 SEPT2Q15019 361 aa30.33■■■□□ 2.45
SMAD6-202ENST00000557916 CCL15Q16663 113 aa30.33■■■□□ 2.45
SMAD6-202ENST00000557916 IMMTQ16891 758 aaKnown RBP30.33■■■□□ 2.45
SMAD6-202ENST00000557916 WDR18Q9BV38 432 aa30.33■■■□□ 2.45
SMAD6-202ENST00000557916 INCENPQ9NQS7 918 aa30.33■■■□□ 2.45
SMAD6-202ENST00000557916 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.33■■■□□ 2.45
SMAD6-202ENST00000557916 U3KPZ7 1027 aaPredicted RBP30.33■■■□□ 2.45
SMAD6-202ENST00000557916 MYH8P13535 1937 aa30.32■■■□□ 2.44
SMAD6-202ENST00000557916 PCNTO95613 3336 aa30.32■■■□□ 2.44
SMAD6-202ENST00000557916 TESPA1A2RU30 521 aaPredicted RBP30.32■■■□□ 2.44
SMAD6-202ENST00000557916 MAP4K1Q92918 833 aa30.32■■■□□ 2.44
SMAD6-202ENST00000557916 TACC3Q9Y6A5 838 aa30.32■■■□□ 2.44
SMAD6-202ENST00000557916 BRI3BPQ8WY22 251 aa30.31■■■□□ 2.44
SMAD6-202ENST00000557916 LSG1Q9H089 658 aaKnown RBP30.31■■■□□ 2.44
SMAD6-202ENST00000557916 NBPF3Q9H094 633 aa30.31■■■□□ 2.44
SMAD6-202ENST00000557916 ANO2Q9NQ90 1003 aa30.31■■■□□ 2.44
SMAD6-202ENST00000557916 PHIPQ8WWQ0 1821 aa30.31■■■□□ 2.44
SMAD6-202ENST00000557916 FGRP09769 529 aa30.3■■■□□ 2.44
SMAD6-202ENST00000557916 WBP1LQ9NX94 342 aa30.3■■■□□ 2.44
SMAD6-202ENST00000557916 A0A0G2JLL6 359 aaPredicted RBP30.3■■■□□ 2.44
SMAD6-202ENST00000557916 AKNAD1Q5T1N1 836 aa30.3■■■□□ 2.44
SMAD6-202ENST00000557916 MFSD6Q6ZSS7 791 aa30.3■■■□□ 2.44
SMAD6-202ENST00000557916 PRRT2Q7Z6L0 340 aaPredicted RBP30.3■■■□□ 2.44
SMAD6-202ENST00000557916 TBC1D10CQ8IV04 446 aa30.3■■■□□ 2.44
SMAD6-202ENST00000557916 PTPN18Q99952 460 aa30.3■■■□□ 2.44
SMAD6-202ENST00000557916 BEGAINQ9BUH8 593 aa30.3■■■□□ 2.44
SMAD6-202ENST00000557916 RNF41Q9H4P4 317 aaPredicted RBP30.3■■■□□ 2.44
SMAD6-202ENST00000557916 TOMM22Q9NS69 142 aa30.3■■■□□ 2.44
SMAD6-202ENST00000557916 ORC4O43929 436 aa30.29■■■□□ 2.44
SMAD6-202ENST00000557916 IFNL1Q8IU54 200 aa30.29■■■□□ 2.44
SMAD6-202ENST00000557916 STAG1Q8WVM7 1258 aa30.29■■■□□ 2.44
SMAD6-202ENST00000557916 USP17L10C9JJH3 530 aa30.28■■■□□ 2.44
SMAD6-202ENST00000557916 IGF2BP3O00425 579 aaKnown RBP eCLIP30.28■■■□□ 2.44
SMAD6-202ENST00000557916 PCP11498 1178 aaKnown RBP30.28■■■□□ 2.44
SMAD6-202ENST00000557916 FAM47AQ5JRC9 791 aa30.28■■■□□ 2.44
SMAD6-202ENST00000557916 GNL3Q9BVP2 549 aaKnown RBP eCLIP30.28■■■□□ 2.44
SMAD6-202ENST00000557916 RBM8AQ9Y5S9 174 aaKnown RBP30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms