RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 CDCP2Q5VXM1 449 aa4.92□□□□□ -1.62
TDP1-217ENST00000557782 SLC4A10Q6U841 1118 aa4.92□□□□□ -1.62
TDP1-217ENST00000557782 HFE2Q6ZVN8 426 aa4.92□□□□□ -1.62
TDP1-217ENST00000557782 HDXQ7Z353 690 aa4.92□□□□□ -1.62
TDP1-217ENST00000557782 RAB44Q7Z6P3 723 aaPredicted RBP4.92□□□□□ -1.62
TDP1-217ENST00000557782 STRA8Q7Z7C7 330 aa4.92□□□□□ -1.62
TDP1-217ENST00000557782 PDZD3Q86UT5 571 aa4.92□□□□□ -1.62
TDP1-217ENST00000557782 SPATS2Q86XZ4 545 aaKnown RBP4.92□□□□□ -1.62
TDP1-217ENST00000557782 MICALL1Q8N3F8 863 aa4.92□□□□□ -1.62
TDP1-217ENST00000557782 TTC8Q8TAM2 541 aa4.92□□□□□ -1.62
TDP1-217ENST00000557782 PNISRQ8TF01 805 aaKnown RBP4.92□□□□□ -1.62
TDP1-217ENST00000557782 KLHL6Q8WZ60 621 aa4.92□□□□□ -1.62
TDP1-217ENST00000557782 HPS1Q92902 700 aa4.92□□□□□ -1.62
TDP1-217ENST00000557782 CHMP4CQ96CF2 233 aa4.92□□□□□ -1.62
TDP1-217ENST00000557782 IL17RAQ96F46 866 aa4.92□□□□□ -1.62
TDP1-217ENST00000557782 CLUHP3Q96NS8 147 aa4.92□□□□□ -1.62
TDP1-217ENST00000557782 CAMKK2Q96RR4 588 aa4.92□□□□□ -1.62
TDP1-217ENST00000557782 SLC30A3Q99726 388 aa4.92□□□□□ -1.62
TDP1-217ENST00000557782 CDH19Q9H159 772 aa4.92□□□□□ -1.62
TDP1-217ENST00000557782 ARHGEF4Q9NR80 690 aa4.92□□□□□ -1.62
TDP1-217ENST00000557782 STRN4Q9NRL3 753 aa4.92□□□□□ -1.62
TDP1-217ENST00000557782 TOR4AQ9NXH8 423 aa4.92□□□□□ -1.62
TDP1-217ENST00000557782 LRP2BPQ9P2M1 347 aa4.92□□□□□ -1.62
TDP1-217ENST00000557782 SFMBT1Q9UHJ3 866 aa4.92□□□□□ -1.62
TDP1-217ENST00000557782 SPEF1Q9Y4P9 236 aa4.92□□□□□ -1.62
TDP1-217ENST00000557782 CORINQ9Y5Q5 1042 aa4.92□□□□□ -1.62
TDP1-217ENST00000557782 TACC3Q9Y6A5 838 aa4.92□□□□□ -1.62
TDP1-217ENST00000557782 A0A1W2PQU0 124 aa4.91□□□□□ -1.62
TDP1-217ENST00000557782 FAM86C2PA6NEL3 165 aa4.91□□□□□ -1.62
TDP1-217ENST00000557782 GFRA2O00451 464 aa4.91□□□□□ -1.62
TDP1-217ENST00000557782 IFRD1O00458 451 aaPredicted RBP4.91□□□□□ -1.62
TDP1-217ENST00000557782 GPR39O43194 453 aa4.91□□□□□ -1.62
TDP1-217ENST00000557782 RGS20O76081 388 aa4.91□□□□□ -1.62
TDP1-217ENST00000557782 RAG1P15918 1043 aa4.91□□□□□ -1.62
TDP1-217ENST00000557782 CABP4P57796 275 aa4.91□□□□□ -1.62
TDP1-217ENST00000557782 IKBKEQ14164 716 aa4.91□□□□□ -1.62
TDP1-217ENST00000557782 DHCR24Q15392 516 aa4.91□□□□□ -1.62
TDP1-217ENST00000557782 GFOD2Q3B7J2 385 aa4.91□□□□□ -1.62
TDP1-217ENST00000557782 FAM102BQ5T8I3 360 aa4.91□□□□□ -1.62
TDP1-217ENST00000557782 NXNQ6DKJ4 435 aa4.91□□□□□ -1.62
TDP1-217ENST00000557782 KSR2Q6VAB6 950 aa4.91□□□□□ -1.62
TDP1-217ENST00000557782 RIPOR1Q6ZS17 1223 aa4.91□□□□□ -1.62
TDP1-217ENST00000557782 VN1R5Q7Z5H4 357 aa4.91□□□□□ -1.62
TDP1-217ENST00000557782 TCEAL8Q8IYN2 117 aa4.91□□□□□ -1.62
TDP1-217ENST00000557782 ELMO3Q96BJ8 720 aa4.91□□□□□ -1.62
TDP1-217ENST00000557782 EVI5LQ96CN4 794 aa4.91□□□□□ -1.62
TDP1-217ENST00000557782 HOOK2Q96ED9 719 aa4.91□□□□□ -1.62
TDP1-217ENST00000557782 PLPPR2Q96GM1 343 aa4.91□□□□□ -1.62
TDP1-217ENST00000557782 SLC9A7Q96T83 725 aa4.91□□□□□ -1.62
TDP1-217ENST00000557782 ADAM19Q9H013 955 aa4.91□□□□□ -1.62
TDP1-217ENST00000557782 PUS7LQ9H0K6 701 aaKnown RBP4.91□□□□□ -1.62
TDP1-217ENST00000557782 NUCKS1Q9H1E3 243 aaKnown RBP4.91□□□□□ -1.62
TDP1-217ENST00000557782 KLHL3Q9UH77 587 aa4.91□□□□□ -1.62
TDP1-217ENST00000557782 ZNF214Q9UL59 606 aaPredicted RBP4.91□□□□□ -1.62
TDP1-217ENST00000557782 ANKRD34BA5PLL1 514 aa4.9□□□□□ -1.63
TDP1-217ENST00000557782 ZBTB42B2RXF5 422 aa4.9□□□□□ -1.63
TDP1-217ENST00000557782 H7C1W4 665 aa4.9□□□□□ -1.63
TDP1-217ENST00000557782 GDF9O60383 454 aa4.9□□□□□ -1.63
TDP1-217ENST00000557782 EFCAB14O75071 495 aa4.9□□□□□ -1.63
TDP1-217ENST00000557782 U2AF1L5P0DN76 240 aaPredicted RBP4.9□□□□□ -1.63
TDP1-217ENST00000557782 FLT3P36888 993 aa4.9□□□□□ -1.63
TDP1-217ENST00000557782 CDK8P49336 464 aa4.9□□□□□ -1.63
TDP1-217ENST00000557782 NEK4P51957 841 aa4.9□□□□□ -1.63
TDP1-217ENST00000557782 PPP2R2AP63151 447 aa4.9□□□□□ -1.63
TDP1-217ENST00000557782 U2AF1Q01081 240 aaKnown RBP eCLIP4.9□□□□□ -1.63
TDP1-217ENST00000557782 TBC1D8BQ0IIM8 1120 aa4.9□□□□□ -1.63
TDP1-217ENST00000557782 STAT4Q14765 748 aa4.9□□□□□ -1.63
TDP1-217ENST00000557782 TMEM201Q5SNT2 666 aa4.9□□□□□ -1.63
TDP1-217ENST00000557782 SPTY2D1Q68D10 685 aaPredicted RBP4.9□□□□□ -1.63
TDP1-217ENST00000557782 MPRIPQ6WCQ1 1025 aa4.9□□□□□ -1.63
TDP1-217ENST00000557782 C11orf96Q7Z7L8 435 aa4.9□□□□□ -1.63
TDP1-217ENST00000557782 GPBAR1Q8TDU6 330 aa4.9□□□□□ -1.63
TDP1-217ENST00000557782 SLC7A3Q8WY07 619 aa4.9□□□□□ -1.63
TDP1-217ENST00000557782 USP7Q93009 1102 aa4.9□□□□□ -1.63
TDP1-217ENST00000557782 PPP1R14AQ96A00 147 aa4.9□□□□□ -1.63
TDP1-217ENST00000557782 DHRS1Q96LJ7 313 aa4.9□□□□□ -1.63
TDP1-217ENST00000557782 TTC1Q99614 292 aa4.9□□□□□ -1.63
TDP1-217ENST00000557782 YIPF4Q9BSR8 244 aa4.9□□□□□ -1.63
TDP1-217ENST00000557782 UBE2OQ9C0C9 1292 aaKnown RBP4.9□□□□□ -1.63
TDP1-217ENST00000557782 IGFLR1Q9H665 355 aa4.9□□□□□ -1.63
TDP1-217ENST00000557782 KRT82Q9NSB4 513 aa4.9□□□□□ -1.63
TDP1-217ENST00000557782 CACNA2D2Q9NY47 1150 aa4.9□□□□□ -1.63
TDP1-217ENST00000557782 ZNF180Q9UJW8 692 aa4.9□□□□□ -1.63
TDP1-217ENST00000557782 SOS2Q07890 1332 aaPredicted RBP4.9□□□□□ -1.63
TDP1-217ENST00000557782 TNFRSF10AO00220 468 aa4.89□□□□□ -1.63
TDP1-217ENST00000557782 OPA1O60313 960 aa4.89□□□□□ -1.63
TDP1-217ENST00000557782 WDHD1O75717 1129 aaPredicted RBP4.89□□□□□ -1.63
TDP1-217ENST00000557782 DNAJC8O75937 253 aaPredicted RBP4.89□□□□□ -1.63
TDP1-217ENST00000557782 FOSP01100 380 aaPredicted RBP4.89□□□□□ -1.63
TDP1-217ENST00000557782 APPP05067 770 aa4.89□□□□□ -1.63
TDP1-217ENST00000557782 FGFR1P11362 822 aa4.89□□□□□ -1.63
TDP1-217ENST00000557782 CD33P20138 364 aa4.89□□□□□ -1.63
TDP1-217ENST00000557782 POU3F2P20265 443 aaPredicted RBP4.89□□□□□ -1.63
TDP1-217ENST00000557782 CDC27P30260 824 aa4.89□□□□□ -1.63
TDP1-217ENST00000557782 TMPRSS15P98073 1019 aa4.89□□□□□ -1.63
TDP1-217ENST00000557782 TRIM61Q5EBN2 209 aa4.89□□□□□ -1.63
TDP1-217ENST00000557782 ZFYVE27Q5T4F4 411 aa4.89□□□□□ -1.63
TDP1-217ENST00000557782 PKN3Q6P5Z2 889 aa4.89□□□□□ -1.63
TDP1-217ENST00000557782 LRFN4Q6PJG9 635 aa4.89□□□□□ -1.63
TDP1-217ENST00000557782 MAGEB6Q8N7X4 407 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms