RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 ZNF384Q8TF68 577 aa10.03□□□□□ -0.8
PSEN1-223ENST00000557511 OPTNQ96CV9 577 aa10.03□□□□□ -0.8
PSEN1-223ENST00000557511 WNK4Q96J92 1243 aa10.03□□□□□ -0.8
PSEN1-223ENST00000557511 FSD1Q9BTV5 496 aa10.03□□□□□ -0.8
PSEN1-223ENST00000557511 LNPKQ9C0E8 428 aa10.03□□□□□ -0.8
PSEN1-223ENST00000557511 DDX4Q9NQI0 724 aaKnown RBP10.03□□□□□ -0.8
PSEN1-223ENST00000557511 PI4KBQ9UBF8 816 aa10.03□□□□□ -0.8
PSEN1-223ENST00000557511 HERC5Q9UII4 1024 aaKnown RBP10.03□□□□□ -0.8
PSEN1-223ENST00000557511 SSC5DA1L4H1 1573 aa10.02□□□□□ -0.81
PSEN1-223ENST00000557511 MYH2Q9UKX2 1941 aa10.02□□□□□ -0.81
PSEN1-223ENST00000557511 DDTLA6NHG4 134 aaPredicted RBP10.02□□□□□ -0.81
PSEN1-223ENST00000557511 POLR3DP05423 398 aaPredicted RBP10.02□□□□□ -0.81
PSEN1-223ENST00000557511 ADD2P35612 726 aa10.02□□□□□ -0.81
PSEN1-223ENST00000557511 GTF2A2P52657 109 aa10.02□□□□□ -0.81
PSEN1-223ENST00000557511 VGLL4Q14135 290 aa10.02□□□□□ -0.81
PSEN1-223ENST00000557511 TSHZ3Q63HK5 1081 aa10.02□□□□□ -0.81
PSEN1-223ENST00000557511 ADGRA1Q86SQ6 560 aa10.02□□□□□ -0.81
PSEN1-223ENST00000557511 CHD1LQ86WJ1 897 aa10.02□□□□□ -0.81
PSEN1-223ENST00000557511 FOXP4Q8IVH2 680 aaPredicted RBP10.02□□□□□ -0.81
PSEN1-223ENST00000557511 ZFPM1Q8IX07 1006 aa10.02□□□□□ -0.81
PSEN1-223ENST00000557511 SMC5Q8IY18 1101 aa10.02□□□□□ -0.81
PSEN1-223ENST00000557511 KBTBD3Q8NAB2 608 aa10.02□□□□□ -0.81
PSEN1-223ENST00000557511 KCNV2Q8TDN2 545 aa10.02□□□□□ -0.81
PSEN1-223ENST00000557511 ZKSCAN4Q969J2 545 aaPredicted RBP10.02□□□□□ -0.81
PSEN1-223ENST00000557511 EDC3Q96F86 508 aaKnown RBP10.02□□□□□ -0.81
PSEN1-223ENST00000557511 CLMNQ96JQ2 1002 aa10.02□□□□□ -0.81
PSEN1-223ENST00000557511 SAGE1Q9NXZ1 904 aa10.02□□□□□ -0.81
PSEN1-223ENST00000557511 FLT1P17948 1338 aa10.02□□□□□ -0.81
PSEN1-223ENST00000557511 MAST2Q6P0Q8 1798 aa10.01□□□□□ -0.81
PSEN1-223ENST00000557511 SPDYE5A6NIY4 337 aa10.01□□□□□ -0.81
PSEN1-223ENST00000557511 TRIM6-TRIM34B2RNG4 842 aa10.01□□□□□ -0.81
PSEN1-223ENST00000557511 FOXN1O15353 648 aa10.01□□□□□ -0.81
PSEN1-223ENST00000557511 RNF113AO15541 343 aaKnown RBP10.01□□□□□ -0.81
PSEN1-223ENST00000557511 CTNND1O60716 968 aaKnown RBP10.01□□□□□ -0.81
PSEN1-223ENST00000557511 TRPA1O75762 1119 aa10.01□□□□□ -0.81
PSEN1-223ENST00000557511 PPATQ06203 517 aa10.01□□□□□ -0.81
PSEN1-223ENST00000557511 SNAPC2Q13487 334 aa10.01□□□□□ -0.81
PSEN1-223ENST00000557511 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.01□□□□□ -0.81
PSEN1-223ENST00000557511 SAP30BPQ9UHR5 308 aaKnown RBP10.01□□□□□ -0.81
PSEN1-223ENST00000557511 ARIH1Q9Y4X5 557 aaPredicted RBP10.01□□□□□ -0.81
PSEN1-223ENST00000557511 COL2A1P02458 1487 aaPredicted RBP10.01□□□□□ -0.81
PSEN1-223ENST00000557511 ATRNL1Q5VV63 1379 aa10.01□□□□□ -0.81
PSEN1-223ENST00000557511 MBD4O95243 580 aa10□□□□□ -0.81
PSEN1-223ENST00000557511 IGHDP01880 384 aa10□□□□□ -0.81
PSEN1-223ENST00000557511 CETPP11597 493 aa10□□□□□ -0.81
PSEN1-223ENST00000557511 GNAT2P19087 354 aa10□□□□□ -0.81
PSEN1-223ENST00000557511 INPP5BP32019 993 aa10□□□□□ -0.81
PSEN1-223ENST00000557511 TM4SF4P48230 202 aa10□□□□□ -0.81
PSEN1-223ENST00000557511 FOSBP53539 338 aa10□□□□□ -0.81
PSEN1-223ENST00000557511 PDE1AP54750 535 aa10□□□□□ -0.81
PSEN1-223ENST00000557511 NUCB1Q02818 461 aa10□□□□□ -0.81
PSEN1-223ENST00000557511 PPIL2Q13356 520 aa10□□□□□ -0.81
PSEN1-223ENST00000557511 NOL9Q5SY16 702 aaKnown RBP10□□□□□ -0.81
PSEN1-223ENST00000557511 SH3BP5LQ7L8J4 393 aa10□□□□□ -0.81
PSEN1-223ENST00000557511 SCYL3Q8IZE3 742 aa10□□□□□ -0.81
PSEN1-223ENST00000557511 APPBP2Q92624 585 aa10□□□□□ -0.81
PSEN1-223ENST00000557511 DDX12PQ92771 950 aa10□□□□□ -0.81
PSEN1-223ENST00000557511 EVI5LQ96CN4 794 aa10□□□□□ -0.81
PSEN1-223ENST00000557511 RIOK1Q9BRS2 568 aaKnown RBP10□□□□□ -0.81
PSEN1-223ENST00000557511 ARMT1Q9H993 441 aa10□□□□□ -0.81
PSEN1-223ENST00000557511 AS3MTQ9HBK9 375 aa10□□□□□ -0.81
PSEN1-223ENST00000557511 ATP8A2Q9NTI2 1148 aa10□□□□□ -0.81
PSEN1-223ENST00000557511 MCM9Q9NXL9 1143 aa10□□□□□ -0.81
PSEN1-223ENST00000557511 STAP2Q9UGK3 403 aa10□□□□□ -0.81
PSEN1-223ENST00000557511 ZNF112Q9UJU3 913 aa10□□□□□ -0.81
PSEN1-223ENST00000557511 PALD1Q9ULE6 856 aa10□□□□□ -0.81
PSEN1-223ENST00000557511 RFX7Q2KHR2 1363 aa10□□□□□ -0.81
PSEN1-223ENST00000557511 CCL15-CCL14A0A0B4J2E2 113 aa9.99□□□□□ -0.81
PSEN1-223ENST00000557511 APPP05067 770 aa9.99□□□□□ -0.81
PSEN1-223ENST00000557511 PBX2P40425 430 aa9.99□□□□□ -0.81
PSEN1-223ENST00000557511 LBX1P52954 281 aa9.99□□□□□ -0.81
PSEN1-223ENST00000557511 CCL15Q16663 113 aa9.99□□□□□ -0.81
PSEN1-223ENST00000557511 LCORLQ8N3X6 602 aa9.99□□□□□ -0.81
PSEN1-223ENST00000557511 PI4K2BQ8TCG2 481 aa9.99□□□□□ -0.81
PSEN1-223ENST00000557511 OTUD7AQ8TE49 926 aaPredicted RBP9.99□□□□□ -0.81
PSEN1-223ENST00000557511 RILPL2Q969X0 211 aa9.99□□□□□ -0.81
PSEN1-223ENST00000557511 ZIC5Q96T25 663 aa9.99□□□□□ -0.81
PSEN1-223ENST00000557511 TBC1D2Q9BYX2 928 aa9.99□□□□□ -0.81
PSEN1-223ENST00000557511 NACAP1Q9BZK3 213 aa9.99□□□□□ -0.81
PSEN1-223ENST00000557511 CABP5Q9NP86 173 aa9.99□□□□□ -0.81
PSEN1-223ENST00000557511 PRDM10Q9NQV6 1147 aa9.99□□□□□ -0.81
PSEN1-223ENST00000557511 GINM1Q9NU53 330 aa9.99□□□□□ -0.81
PSEN1-223ENST00000557511 RNF186Q9NXI6 227 aa9.99□□□□□ -0.81
PSEN1-223ENST00000557511 SERPINB13Q9UIV8 391 aa9.99□□□□□ -0.81
PSEN1-223ENST00000557511 SNCAIPQ9Y6H5 919 aa9.99□□□□□ -0.81
PSEN1-223ENST00000557511 SLC4A4Q9Y6R1 1079 aa9.99□□□□□ -0.81
PSEN1-223ENST00000557511 AK9Q5TCS8 1911 aa9.99□□□□□ -0.81
PSEN1-223ENST00000557511 AKAP11Q9UKA4 1901 aa9.99□□□□□ -0.81
PSEN1-223ENST00000557511 TCRBV5S4A2TA0A5A2 114 aa9.98□□□□□ -0.81
PSEN1-223ENST00000557511 CXCL11O14625 94 aa9.98□□□□□ -0.81
PSEN1-223ENST00000557511 ASNSP08243 561 aa9.98□□□□□ -0.81
PSEN1-223ENST00000557511 HSPA8P11142 646 aaKnown RBP9.98□□□□□ -0.81
PSEN1-223ENST00000557511 CAP2P40123 477 aa9.98□□□□□ -0.81
PSEN1-223ENST00000557511 MAP3K10Q02779 954 aa9.98□□□□□ -0.81
PSEN1-223ENST00000557511 SLC4A8Q2Y0W8 1093 aa9.98□□□□□ -0.81
PSEN1-223ENST00000557511 FASTKD5Q7L8L6 764 aaKnown RBP9.98□□□□□ -0.81
PSEN1-223ENST00000557511 ZDHHC16Q969W1 377 aa9.98□□□□□ -0.81
PSEN1-223ENST00000557511 TSKSQ9UJT2 592 aa9.98□□□□□ -0.81
PSEN1-223ENST00000557511 ZHX2Q9Y6X8 837 aa9.98□□□□□ -0.81
PSEN1-223ENST00000557511 CEP350Q5VT06 3117 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms