RNA–Protein interactions for RNA: ENST00000557344.5

APEX1-218, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-218ENST00000557344 SRGAP3O43295 1099 aa12.46□□□□□ -0.41
APEX1-218ENST00000557344 ADORA1P30542 326 aa12.46□□□□□ -0.41
APEX1-218ENST00000557344 MAPK4P31152 587 aa12.46□□□□□ -0.41
APEX1-218ENST00000557344 HERVK_113P62684 666 aa12.46□□□□□ -0.41
APEX1-218ENST00000557344 RASGRF1Q13972 1273 aa12.46□□□□□ -0.41
APEX1-218ENST00000557344 PDE3AQ14432 1141 aa12.46□□□□□ -0.41
APEX1-218ENST00000557344 Q3C1V9 767 aa12.46□□□□□ -0.41
APEX1-218ENST00000557344 MORN1Q5T089 497 aa12.46□□□□□ -0.41
APEX1-218ENST00000557344 SPTY2D1Q68D10 685 aaPredicted RBP12.46□□□□□ -0.41
APEX1-218ENST00000557344 WDR18Q9BV38 432 aa12.46□□□□□ -0.41
APEX1-218ENST00000557344 SENP6Q9GZR1 1112 aaPredicted RBP12.46□□□□□ -0.41
APEX1-218ENST00000557344 AS3MTQ9HBK9 375 aa12.46□□□□□ -0.41
APEX1-218ENST00000557344 RBPJLQ9UBG7 517 aa12.46□□□□□ -0.41
APEX1-218ENST00000557344 LAMA2P24043 3122 aaKnown RBP12.45□□□□□ -0.42
APEX1-218ENST00000557344 MAP4K4O95819 1239 aaPredicted RBP12.45□□□□□ -0.42
APEX1-218ENST00000557344 GNAI2P04899 355 aa12.45□□□□□ -0.42
APEX1-218ENST00000557344 RLBP1P12271 317 aa12.45□□□□□ -0.42
APEX1-218ENST00000557344 RGS2P41220 211 aa12.45□□□□□ -0.42
APEX1-218ENST00000557344 BACE1P56817 501 aa12.45□□□□□ -0.42
APEX1-218ENST00000557344 MECOMQ03112 1051 aa12.45□□□□□ -0.42
APEX1-218ENST00000557344 MTMR2Q13614 643 aa12.45□□□□□ -0.42
APEX1-218ENST00000557344 GPR142Q7Z601 462 aa12.45□□□□□ -0.42
APEX1-218ENST00000557344 ZNF384Q8TF68 577 aa12.45□□□□□ -0.42
APEX1-218ENST00000557344 PORCNQ9H237 461 aa12.45□□□□□ -0.42
APEX1-218ENST00000557344 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.45□□□□□ -0.42
APEX1-218ENST00000557344 EYSQ5T1H1 3165 aa12.44□□□□□ -0.42
APEX1-218ENST00000557344 PNMA6EA0A0J9YXQ4 647 aa12.44□□□□□ -0.42
APEX1-218ENST00000557344 ERVK-9P63128 1117 aa12.44□□□□□ -0.42
APEX1-218ENST00000557344 ERVK-24P63145 666 aa12.44□□□□□ -0.42
APEX1-218ENST00000557344 SHHQ15465 462 aa12.44□□□□□ -0.42
APEX1-218ENST00000557344 POTEEQ6S8J3 1075 aa12.44□□□□□ -0.42
APEX1-218ENST00000557344 PLEKHH3Q7Z736 793 aa12.44□□□□□ -0.42
APEX1-218ENST00000557344 SYMPKQ92797 1274 aaKnown RBP12.44□□□□□ -0.42
APEX1-218ENST00000557344 APBA2Q99767 749 aa12.44□□□□□ -0.42
APEX1-218ENST00000557344 TMOD4Q9NZQ9 345 aa12.44□□□□□ -0.42
APEX1-218ENST00000557344 HERC5Q9UII4 1024 aaKnown RBP12.44□□□□□ -0.42
APEX1-218ENST00000557344 TTC28Q96AY4 2481 aa12.43□□□□□ -0.42
APEX1-218ENST00000557344 C19orf81C9J6K1 198 aa12.43□□□□□ -0.42
APEX1-218ENST00000557344 ATN1P54259 1190 aaPredicted RBP12.43□□□□□ -0.42
APEX1-218ENST00000557344 TIMM10P62072 90 aa12.43□□□□□ -0.42
APEX1-218ENST00000557344 JAG1P78504 1218 aa12.43□□□□□ -0.42
APEX1-218ENST00000557344 ERICH6Q7L0X2 663 aa12.43□□□□□ -0.42
APEX1-218ENST00000557344 CCAR1Q8IX12 1150 aaKnown RBP12.43□□□□□ -0.42
APEX1-218ENST00000557344 MYLIPQ8WY64 445 aa12.43□□□□□ -0.42
APEX1-218ENST00000557344 TTYH1Q9H313 450 aaPredicted RBP12.43□□□□□ -0.42
APEX1-218ENST00000557344 PRKAG2Q9UGJ0 569 aa12.43□□□□□ -0.42
APEX1-218ENST00000557344 SPTBN5Q9NRC6 3674 aaKnown RBP12.42□□□□□ -0.42
APEX1-218ENST00000557344 ATAD5Q96QE3 1844 aa12.42□□□□□ -0.42
APEX1-218ENST00000557344 DNM1LO00429 736 aa12.42□□□□□ -0.42
APEX1-218ENST00000557344 ASNSP08243 561 aa12.42□□□□□ -0.42
APEX1-218ENST00000557344 RTP1P59025 263 aa12.42□□□□□ -0.42
APEX1-218ENST00000557344 SMAD3P84022 425 aaKnown RBP12.42□□□□□ -0.42
APEX1-218ENST00000557344 TFCP2Q12800 502 aa12.42□□□□□ -0.42
APEX1-218ENST00000557344 MAP2K5Q13163 448 aa12.42□□□□□ -0.42
APEX1-218ENST00000557344 C9orf50Q5SZB4 431 aa12.42□□□□□ -0.42
APEX1-218ENST00000557344 MFSD14CQ5VZR4 134 aa12.42□□□□□ -0.42
APEX1-218ENST00000557344 GTF3C2Q8WUA4 911 aaPredicted RBP12.42□□□□□ -0.42
APEX1-218ENST00000557344 LPAR1Q92633 364 aa12.42□□□□□ -0.42
APEX1-218ENST00000557344 EDC3Q96F86 508 aaKnown RBP12.42□□□□□ -0.42
APEX1-218ENST00000557344 PI4KBQ9UBF8 816 aa12.42□□□□□ -0.42
APEX1-218ENST00000557344 DDX20Q9UHI6 824 aaKnown RBP12.42□□□□□ -0.42
APEX1-218ENST00000557344 MAST2Q6P0Q8 1798 aa12.42□□□□□ -0.42
APEX1-218ENST00000557344 PRUNE2Q8WUY3 3088 aa12.42□□□□□ -0.42
APEX1-218ENST00000557344 A0A1B0GUL7 405 aa12.41□□□□□ -0.42
APEX1-218ENST00000557344 USP17L10C9JJH3 530 aa12.41□□□□□ -0.42
APEX1-218ENST00000557344 MSCO60682 206 aa12.41□□□□□ -0.42
APEX1-218ENST00000557344 LDHCP07864 332 aa12.41□□□□□ -0.42
APEX1-218ENST00000557344 GSTO1P78417 241 aa12.41□□□□□ -0.42
APEX1-218ENST00000557344 POLA2Q14181 598 aa12.41□□□□□ -0.42
APEX1-218ENST00000557344 FTSJ3Q8IY81 847 aaKnown RBP12.41□□□□□ -0.42
APEX1-218ENST00000557344 SSH3Q8TE77 659 aa12.41□□□□□ -0.42
APEX1-218ENST00000557344 NSUN4Q96CB9 384 aaKnown RBP12.41□□□□□ -0.42
APEX1-218ENST00000557344 PAGR1Q9BTK6 254 aa12.41□□□□□ -0.42
APEX1-218ENST00000557344 FLRT1Q9NZU1 646 aa12.41□□□□□ -0.42
APEX1-218ENST00000557344 DNAH12Q6ZR08 3092 aa12.4□□□□□ -0.42
APEX1-218ENST00000557344 FOSL2P15408 326 aa12.4□□□□□ -0.42
APEX1-218ENST00000557344 COL9A1P20849 921 aa12.4□□□□□ -0.42
APEX1-218ENST00000557344 ATP8B2P98198 1209 aa12.4□□□□□ -0.42
APEX1-218ENST00000557344 METTL16Q86W50 562 aaKnown RBP12.4□□□□□ -0.42
APEX1-218ENST00000557344 ITPRIPQ8IWB1 547 aa12.4□□□□□ -0.42
APEX1-218ENST00000557344 TEX11Q8IYF3 940 aa12.4□□□□□ -0.42
APEX1-218ENST00000557344 PANK1Q8TE04 598 aa12.4□□□□□ -0.42
APEX1-218ENST00000557344 XAGE2Q96GT9 111 aa12.4□□□□□ -0.42
APEX1-218ENST00000557344 DHX36Q9H2U1 1008 aaKnown RBP12.4□□□□□ -0.42
APEX1-218ENST00000557344 C1orf115Q9H7X2 142 aa12.4□□□□□ -0.42
APEX1-218ENST00000557344 GINM1Q9NU53 330 aa12.4□□□□□ -0.42
APEX1-218ENST00000557344 RABGAP1Q9Y3P9 1069 aa12.4□□□□□ -0.42
APEX1-218ENST00000557344 LTBP2Q14767 1821 aa12.39□□□□□ -0.43
APEX1-218ENST00000557344 FRMPD3Q5JV73 1810 aa12.39□□□□□ -0.43
APEX1-218ENST00000557344 SLC15A5A6NIM6 579 aa12.39□□□□□ -0.43
APEX1-218ENST00000557344 CNMDO75829 334 aa12.39□□□□□ -0.43
APEX1-218ENST00000557344 GLRX3O76003 335 aaKnown RBP12.39□□□□□ -0.43
APEX1-218ENST00000557344 IGHA2P01877 340 aa12.39□□□□□ -0.43
APEX1-218ENST00000557344 HOXC6P09630 235 aa12.39□□□□□ -0.43
APEX1-218ENST00000557344 CNGA1P29973 690 aa12.39□□□□□ -0.43
APEX1-218ENST00000557344 MVPQ14764 893 aaKnown RBP12.39□□□□□ -0.43
APEX1-218ENST00000557344 SHROOM1Q2M3G4 852 aaPredicted RBP12.39□□□□□ -0.43
APEX1-218ENST00000557344 SLC39A5Q6ZMH5 540 aa12.39□□□□□ -0.43
APEX1-218ENST00000557344 TBC1D9Q6ZT07 1266 aa12.39□□□□□ -0.43
APEX1-218ENST00000557344 BADQ92934 168 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms