RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 CERKLQ49MI3 558 aaPredicted RBP14.97□□□□□ -0.01
SLIRP-209ENST00000557342 ANKRD23Q86SG2 305 aa14.97□□□□□ -0.01
SLIRP-209ENST00000557342 FAM43AQ8N2R8 423 aa14.97□□□□□ -0.01
SLIRP-209ENST00000557342 ZNF280CQ8ND82 737 aa14.97□□□□□ -0.01
SLIRP-209ENST00000557342 RILPL2Q969X0 211 aa14.97□□□□□ -0.01
SLIRP-209ENST00000557342 ZFYVE28Q9HCC9 887 aa14.97□□□□□ -0.01
SLIRP-209ENST00000557342 A0A0G2JLL6 359 aaPredicted RBP14.96□□□□□ -0.01
SLIRP-209ENST00000557342 TRIM75PA6NK02 468 aa14.96□□□□□ -0.01
SLIRP-209ENST00000557342 GSG1L2A8MUP6 293 aa14.96□□□□□ -0.01
SLIRP-209ENST00000557342 PATL2C9JE40 543 aaKnown RBP14.96□□□□□ -0.01
SLIRP-209ENST00000557342 BTBD19C9JJ37 291 aa14.96□□□□□ -0.01
SLIRP-209ENST00000557342 USP17L12C9JPN9 530 aa14.96□□□□□ -0.01
SLIRP-209ENST00000557342 USP17L21D6R901 530 aa14.96□□□□□ -0.01
SLIRP-209ENST00000557342 GDF11O95390 407 aa14.96□□□□□ -0.01
SLIRP-209ENST00000557342 NEFLP07196 543 aa14.96□□□□□ -0.01
SLIRP-209ENST00000557342 CRHR2Q13324 411 aa14.96□□□□□ -0.01
SLIRP-209ENST00000557342 C12orf60Q5U649 245 aa14.96□□□□□ -0.01
SLIRP-209ENST00000557342 PRRT2Q7Z6L0 340 aaPredicted RBP14.96□□□□□ -0.01
SLIRP-209ENST00000557342 WDR18Q9BV38 432 aa14.96□□□□□ -0.01
SLIRP-209ENST00000557342 NACAP1Q9BZK3 213 aa14.96□□□□□ -0.01
SLIRP-209ENST00000557342 CABP5Q9NP86 173 aa14.96□□□□□ -0.01
SLIRP-209ENST00000557342 HELLSQ9NRZ9 838 aa14.96□□□□□ -0.01
SLIRP-209ENST00000557342 ZBTB21Q9ULJ3 1066 aa14.96□□□□□ -0.01
SLIRP-209ENST00000557342 APPP05067 770 aa14.95□□□□□ -0.02
SLIRP-209ENST00000557342 SHMT1P34896 483 aa14.95□□□□□ -0.02
SLIRP-209ENST00000557342 SPP2Q13103 211 aa14.95□□□□□ -0.02
SLIRP-209ENST00000557342 ABCB5Q2M3G0 1257 aa14.95□□□□□ -0.02
SLIRP-209ENST00000557342 SBK1Q52WX2 424 aa14.95□□□□□ -0.02
SLIRP-209ENST00000557342 CTR9Q6PD62 1173 aa14.95□□□□□ -0.02
SLIRP-209ENST00000557342 TNS4Q8IZW8 715 aa14.95□□□□□ -0.02
SLIRP-209ENST00000557342 SEC62Q99442 399 aaKnown RBP14.95□□□□□ -0.02
SLIRP-209ENST00000557342 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.95□□□□□ -0.02
SLIRP-209ENST00000557342 PDHXO00330 501 aa14.94□□□□□ -0.02
SLIRP-209ENST00000557342 FKTNO75072 461 aa14.94□□□□□ -0.02
SLIRP-209ENST00000557342 GH2P01242 217 aa14.94□□□□□ -0.02
SLIRP-209ENST00000557342 CYP2D6P10635 497 aa14.94□□□□□ -0.02
SLIRP-209ENST00000557342 PDE4AP27815 886 aa14.94□□□□□ -0.02
SLIRP-209ENST00000557342 TDO2P48775 406 aa14.94□□□□□ -0.02
SLIRP-209ENST00000557342 MOGSQ13724 837 aa14.94□□□□□ -0.02
SLIRP-209ENST00000557342 GADL1Q6ZQY3 521 aa14.94□□□□□ -0.02
SLIRP-209ENST00000557342 CCDC84Q86UT8 332 aaPredicted RBP14.94□□□□□ -0.02
SLIRP-209ENST00000557342 PROCA1Q8NCQ7 364 aaPredicted RBP14.94□□□□□ -0.02
SLIRP-209ENST00000557342 ZNF296Q8WUU4 475 aaPredicted RBP14.94□□□□□ -0.02
SLIRP-209ENST00000557342 SLC45A1Q9Y2W3 748 aa14.94□□□□□ -0.02
SLIRP-209ENST00000557342 C19orf81C9J6K1 198 aa14.93□□□□□ -0.02
SLIRP-209ENST00000557342 HIP1O00291 1037 aa14.93□□□□□ -0.02
SLIRP-209ENST00000557342 JAG1P78504 1218 aa14.93□□□□□ -0.02
SLIRP-209ENST00000557342 MCMDC2Q4G0Z9 681 aa14.93□□□□□ -0.02
SLIRP-209ENST00000557342 SH3D19Q5HYK7 790 aa14.93□□□□□ -0.02
SLIRP-209ENST00000557342 C16orf86Q6ZW13 317 aa14.93□□□□□ -0.02
SLIRP-209ENST00000557342 CENPQQ7L2Z9 268 aaPredicted RBP14.93□□□□□ -0.02
SLIRP-209ENST00000557342 IFNL3Q8IZI9 196 aa14.93□□□□□ -0.02
SLIRP-209ENST00000557342 CCDC17Q96LX7 622 aa14.93□□□□□ -0.02
SLIRP-209ENST00000557342 R3HDMLQ9H3Y0 253 aa14.93□□□□□ -0.02
SLIRP-209ENST00000557342 CYP2D7A0A087X1C5 515 aa14.92□□□□□ -0.02
SLIRP-209ENST00000557342 MINDY4BA8MYZ0 360 aa14.92□□□□□ -0.02
SLIRP-209ENST00000557342 USP17L10C9JJH3 530 aa14.92□□□□□ -0.02
SLIRP-209ENST00000557342 TLR2O60603 784 aa14.92□□□□□ -0.02
SLIRP-209ENST00000557342 SDSP20132 328 aa14.92□□□□□ -0.02
SLIRP-209ENST00000557342 CDK8P49336 464 aa14.92□□□□□ -0.02
SLIRP-209ENST00000557342 MFAP1P55081 439 aaKnown RBP14.92□□□□□ -0.02
SLIRP-209ENST00000557342 BACE1P56817 501 aa14.92□□□□□ -0.02
SLIRP-209ENST00000557342 EVX2Q03828 476 aa14.92□□□□□ -0.02
SLIRP-209ENST00000557342 PABPC4Q13310 644 aaKnown RBP eCLIP14.92□□□□□ -0.023e-8■□□□□ 8.6
SLIRP-209ENST00000557342 RAB3GAP1Q15042 981 aa14.92□□□□□ -0.02
SLIRP-209ENST00000557342 TTC22Q5TAA0 569 aa14.92□□□□□ -0.02
SLIRP-209ENST00000557342 GPAT2Q6NUI2 795 aa14.92□□□□□ -0.02
SLIRP-209ENST00000557342 DYNLL2Q96FJ2 89 aa14.92□□□□□ -0.02
SLIRP-209ENST00000557342 PARK7Q99497 189 aaKnown RBP14.92□□□□□ -0.02
SLIRP-209ENST00000557342 NAPBQ9H115 298 aa14.92□□□□□ -0.02
SLIRP-209ENST00000557342 ZNF287Q9HBT7 754 aa14.92□□□□□ -0.02
SLIRP-209ENST00000557342 TMOD4Q9NZQ9 345 aa14.92□□□□□ -0.02
SLIRP-209ENST00000557342 AGTPBP1Q9UPW5 1226 aa14.92□□□□□ -0.02
SLIRP-209ENST00000557342 ROBO3Q96MS0 1386 aa14.91□□□□□ -0.02
SLIRP-209ENST00000557342 MPHOSPH10O00566 681 aaKnown RBP14.91□□□□□ -0.02
SLIRP-209ENST00000557342 SLC3A2P08195 630 aaKnown RBP14.91□□□□□ -0.02
SLIRP-209ENST00000557342 HMGCS2P54868 508 aa14.91□□□□□ -0.02
SLIRP-209ENST00000557342 SP3Q02447 781 aa14.91□□□□□ -0.02
SLIRP-209ENST00000557342 NMIQ13287 307 aaPredicted RBP14.91□□□□□ -0.02
SLIRP-209ENST00000557342 SHROOM1Q2M3G4 852 aaPredicted RBP14.91□□□□□ -0.02
SLIRP-209ENST00000557342 TMEM179Q6ZVK1 233 aa14.91□□□□□ -0.02
SLIRP-209ENST00000557342 CTU1Q7Z7A3 348 aaKnown RBP14.91□□□□□ -0.02
SLIRP-209ENST00000557342 SLC44A5Q8NCS7 719 aa14.91□□□□□ -0.02
SLIRP-209ENST00000557342 ERO1AQ96HE7 468 aa14.91□□□□□ -0.02
SLIRP-209ENST00000557342 FAM227BQ96M60 508 aa14.91□□□□□ -0.02
SLIRP-209ENST00000557342 EPB41L4AQ9HCS5 686 aaPredicted RBP14.91□□□□□ -0.02
SLIRP-209ENST00000557342 DIAPH3Q9NSV4 1193 aa14.91□□□□□ -0.02
SLIRP-209ENST00000557342 PNMA3Q9UL41 463 aa14.91□□□□□ -0.02
SLIRP-209ENST00000557342 A0A0D9SFI3 127 aa14.9□□□□□ -0.02
SLIRP-209ENST00000557342 USP14P54578 494 aa14.9□□□□□ -0.02
SLIRP-209ENST00000557342 DGKZQ13574 1117 aa14.9□□□□□ -0.02
SLIRP-209ENST00000557342 MTMR2Q13614 643 aa14.9□□□□□ -0.02
SLIRP-209ENST00000557342 ARHGEF6Q15052 776 aa14.9□□□□□ -0.02
SLIRP-209ENST00000557342 USP17L2Q6R6M4 530 aa14.9□□□□□ -0.02
SLIRP-209ENST00000557342 CCDC129Q6ZRS4 1044 aa14.9□□□□□ -0.02
SLIRP-209ENST00000557342 FEZ1Q99689 392 aa14.9□□□□□ -0.02
SLIRP-209ENST00000557342 MKNK2Q9HBH9 465 aa14.9□□□□□ -0.02
SLIRP-209ENST00000557342 MGAMO43451 1857 aa14.9□□□□□ -0.02
SLIRP-209ENST00000557342 GREB1LQ9C091 1923 aaPredicted RBP14.9□□□□□ -0.02
SLIRP-209ENST00000557342 OSBPP22059 807 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms