RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 PTCH2Q9Y6C5 1203 aa19.99■□□□□ 0.79
VSX1-207ENST00000557285 LOC285556D6RIA3 1793 aa19.98■□□□□ 0.79
VSX1-207ENST00000557285 BAZ2AQ9UIF9 1905 aaKnown RBP19.98■□□□□ 0.79
VSX1-207ENST00000557285 PRKAB2O43741 272 aa19.98■□□□□ 0.79
VSX1-207ENST00000557285 FMNL1O95466 1100 aaPredicted RBP19.98■□□□□ 0.79
VSX1-207ENST00000557285 GH2P01242 217 aa19.98■□□□□ 0.79
VSX1-207ENST00000557285 CYP2D6P10635 497 aa19.98■□□□□ 0.79
VSX1-207ENST00000557285 PSMC4P43686 418 aa19.98■□□□□ 0.79
VSX1-207ENST00000557285 OTUD7AQ8TE49 926 aaPredicted RBP19.98■□□□□ 0.79
VSX1-207ENST00000557285 MYCP01106 439 aaPredicted RBP19.97■□□□□ 0.79
VSX1-207ENST00000557285 CTGFP29279 349 aa19.97■□□□□ 0.79
VSX1-207ENST00000557285 TBC1D2Q9BYX2 928 aa19.97■□□□□ 0.79
VSX1-207ENST00000557285 RAB3GAP1Q15042 981 aa19.96■□□□□ 0.79
VSX1-207ENST00000557285 ZYXQ15942 572 aaKnown RBP19.96■□□□□ 0.79
VSX1-207ENST00000557285 CERKLQ49MI3 558 aaPredicted RBP19.96■□□□□ 0.79
VSX1-207ENST00000557285 ZSCAN25Q6NSZ9 544 aa19.96■□□□□ 0.79
VSX1-207ENST00000557285 PROCA1Q8NCQ7 364 aaPredicted RBP19.96■□□□□ 0.79
VSX1-207ENST00000557285 TRIM47Q96LD4 638 aa19.96■□□□□ 0.79
VSX1-207ENST00000557285 EHD4Q9H223 541 aa19.96■□□□□ 0.79
VSX1-207ENST00000557285 DCP1AQ9NPI6 582 aaPredicted RBP19.96■□□□□ 0.79
VSX1-207ENST00000557285 TMOD4Q9NZQ9 345 aa19.96■□□□□ 0.79
VSX1-207ENST00000557285 ZBTB47Q9UFB7 747 aaPredicted RBP19.96■□□□□ 0.79
VSX1-207ENST00000557285 SLC45A1Q9Y2W3 748 aa19.96■□□□□ 0.79
VSX1-207ENST00000557285 MGAMO43451 1857 aa19.95■□□□□ 0.78
VSX1-207ENST00000557285 RGS19P49795 217 aa19.95■□□□□ 0.78
VSX1-207ENST00000557285 SLC9C1Q4G0N8 1177 aa19.95■□□□□ 0.78
VSX1-207ENST00000557285 ANKRD45Q5TZF3 282 aa19.95■□□□□ 0.78
VSX1-207ENST00000557285 ANKRD13CQ8N6S4 541 aa19.95■□□□□ 0.78
VSX1-207ENST00000557285 WDR18Q9BV38 432 aa19.95■□□□□ 0.78
VSX1-207ENST00000557285 PNMA3Q9UL41 463 aa19.95■□□□□ 0.78
VSX1-207ENST00000557285 MPHOSPH10O00566 681 aaKnown RBP19.94■□□□□ 0.78
VSX1-207ENST00000557285 BCRP11274 1271 aa19.94■□□□□ 0.78
VSX1-207ENST00000557285 SHMT1P34896 483 aa19.94■□□□□ 0.78
VSX1-207ENST00000557285 BACE1P56817 501 aa19.94■□□□□ 0.78
VSX1-207ENST00000557285 UBE3CQ15386 1083 aa19.94■□□□□ 0.78
VSX1-207ENST00000557285 ABCB5Q2M3G0 1257 aa19.94■□□□□ 0.78
VSX1-207ENST00000557285 TATDN1Q6P1N9 297 aa19.94■□□□□ 0.78
VSX1-207ENST00000557285 SLC44A5Q8NCS7 719 aa19.94■□□□□ 0.78
VSX1-207ENST00000557285 FEZ1Q99689 392 aa19.94■□□□□ 0.78
VSX1-207ENST00000557285 PUS7LQ9H0K6 701 aaKnown RBP19.94■□□□□ 0.78
VSX1-207ENST00000557285 SLC4A4Q9Y6R1 1079 aa19.94■□□□□ 0.78
VSX1-207ENST00000557285 MYH8P13535 1937 aa19.94■□□□□ 0.78
VSX1-207ENST00000557285 CYP2D7A0A087X1C5 515 aa19.93■□□□□ 0.78
VSX1-207ENST00000557285 USP17L10C9JJH3 530 aa19.93■□□□□ 0.78
VSX1-207ENST00000557285 OSBPP22059 807 aa19.93■□□□□ 0.78
VSX1-207ENST00000557285 FCGRTP55899 365 aa19.93■□□□□ 0.78
VSX1-207ENST00000557285 PABPC4Q13310 644 aaKnown RBP eCLIP19.93■□□□□ 0.78
VSX1-207ENST00000557285 SH3TC2Q8TF17 1288 aa19.93■□□□□ 0.78
VSX1-207ENST00000557285 DYNLL2Q96FJ2 89 aa19.93■□□□□ 0.78
VSX1-207ENST00000557285 ASCC2Q9H1I8 757 aaPredicted RBP19.93■□□□□ 0.78
VSX1-207ENST00000557285 IRX3P78415 501 aaPredicted RBP19.92■□□□□ 0.78
VSX1-207ENST00000557285 SH3D19Q5HYK7 790 aa19.92■□□□□ 0.78
VSX1-207ENST00000557285 KBTBD3Q8NAB2 608 aa19.92■□□□□ 0.78
VSX1-207ENST00000557285 DDRGK1Q96HY6 314 aa19.92■□□□□ 0.78
VSX1-207ENST00000557285 CABP5Q9NP86 173 aa19.92■□□□□ 0.78
VSX1-207ENST00000557285 ATP8A2Q9NTI2 1148 aa19.92■□□□□ 0.78
VSX1-207ENST00000557285 GINM1Q9NU53 330 aa19.92■□□□□ 0.78
VSX1-207ENST00000557285 SMIM22K7EJ46 135 aa19.91■□□□□ 0.78
VSX1-207ENST00000557285 ERC2O15083 957 aa19.91■□□□□ 0.78
VSX1-207ENST00000557285 MX1P20591 662 aa19.91■□□□□ 0.78
VSX1-207ENST00000557285 RAET1EQ8TD07 263 aa19.91■□□□□ 0.78
VSX1-207ENST00000557285 SRRDQ9UH36 339 aa19.91■□□□□ 0.78
VSX1-207ENST00000557285 TTC41PQ6P2S7 1318 aa19.91■□□□□ 0.78
VSX1-207ENST00000557285 MYPNQ86TC9 1320 aa19.91■□□□□ 0.78
VSX1-207ENST00000557285 BRCA2P51587 3418 aa19.9■□□□□ 0.78
VSX1-207ENST00000557285 POTEFA5A3E0 1075 aa19.9■□□□□ 0.78
VSX1-207ENST00000557285 C19orf81C9J6K1 198 aa19.9■□□□□ 0.78
VSX1-207ENST00000557285 RNF113AO15541 343 aaKnown RBP19.9■□□□□ 0.78
VSX1-207ENST00000557285 GNRH1P01148 92 aa19.9■□□□□ 0.78
VSX1-207ENST00000557285 HOXD10P28358 340 aa19.9■□□□□ 0.78
VSX1-207ENST00000557285 GABPAQ06546 454 aa19.9■□□□□ 0.78
VSX1-207ENST00000557285 SEPT2Q15019 361 aa19.9■□□□□ 0.78
VSX1-207ENST00000557285 NBPF11Q86T75 865 aa19.9■□□□□ 0.78
VSX1-207ENST00000557285 AMOTL1Q8IY63 956 aa19.9■□□□□ 0.78
VSX1-207ENST00000557285 EXOC6Q8TAG9 804 aa19.9■□□□□ 0.78
VSX1-207ENST00000557285 PI4K2BQ8TCG2 481 aa19.9■□□□□ 0.78
VSX1-207ENST00000557285 ACER1Q8TDN7 264 aa19.9■□□□□ 0.78
VSX1-207ENST00000557285 ARMC5Q96C12 935 aa19.9■□□□□ 0.78
VSX1-207ENST00000557285 FSD1Q9BTV5 496 aa19.9■□□□□ 0.78
VSX1-207ENST00000557285 TAOK2Q9UL54 1235 aa19.9■□□□□ 0.78
VSX1-207ENST00000557285 USP17L12C9JPN9 530 aa19.89■□□□□ 0.77
VSX1-207ENST00000557285 USP17L21D6R901 530 aa19.89■□□□□ 0.77
VSX1-207ENST00000557285 TNPO2O14787 897 aaKnown RBP19.89■□□□□ 0.77
VSX1-207ENST00000557285 PEX10O60683 326 aa19.89■□□□□ 0.77
VSX1-207ENST00000557285 GLRX3O76003 335 aaKnown RBP19.89■□□□□ 0.77
VSX1-207ENST00000557285 PRKCZQ05513 592 aa19.89■□□□□ 0.77
VSX1-207ENST00000557285 HDAC1Q13547 482 aaPredicted RBP19.89■□□□□ 0.77
VSX1-207ENST00000557285 USP17L2Q6R6M4 530 aa19.89■□□□□ 0.77
VSX1-207ENST00000557285 STK11IPQ8N1F8 1099 aa19.89■□□□□ 0.77
VSX1-207ENST00000557285 OSBP2Q969R2 916 aa19.89■□□□□ 0.77
VSX1-207ENST00000557285 EMILIN3Q9NT22 766 aa19.89■□□□□ 0.77
VSX1-207ENST00000557285 GABRQQ9UN88 632 aa19.89■□□□□ 0.77
VSX1-207ENST00000557285 SUPT16HQ9Y5B9 1047 aaKnown RBP19.89■□□□□ 0.77
VSX1-207ENST00000557285 TNRC18O15417 2968 aaPredicted RBP19.89■□□□□ 0.77
VSX1-207ENST00000557285 PRMT2P55345 433 aa19.88■□□□□ 0.77
VSX1-207ENST00000557285 B4GALNT3Q6L9W6 998 aa19.88■□□□□ 0.77
VSX1-207ENST00000557285 APPBP2Q92624 585 aa19.88■□□□□ 0.77
VSX1-207ENST00000557285 GCC1Q96CN9 775 aa19.88■□□□□ 0.77
VSX1-207ENST00000557285 ZNF333Q96JL9 665 aa19.88■□□□□ 0.77
VSX1-207ENST00000557285 STRBPQ96SI9 672 aaKnown RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms