RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 PABPC4Q13310 644 aaKnown RBP eCLIP13.14□□□□□ -0.319e-62■□□□□ 10
HNRNPC-230ENST00000557201 SHROOM1Q2M3G4 852 aaPredicted RBP13.14□□□□□ -0.31
HNRNPC-230ENST00000557201 TGFBRAP1Q8WUH2 860 aa13.14□□□□□ -0.31
HNRNPC-230ENST00000557201 AS3MTQ9HBK9 375 aa13.14□□□□□ -0.31
HNRNPC-230ENST00000557201 NOP58Q9Y2X3 529 aaKnown RBP13.14□□□□□ -0.31
HNRNPC-230ENST00000557201 NR2E3Q9Y5X4 410 aa13.14□□□□□ -0.31
HNRNPC-230ENST00000557201 PLXNB2O15031 1838 aa13.14□□□□□ -0.31
HNRNPC-230ENST00000557201 CDK5RAP2Q96SN8 1893 aa13.13□□□□□ -0.31
HNRNPC-230ENST00000557201 FOCADQ5VW36 1801 aa13.13□□□□□ -0.31
HNRNPC-230ENST00000557201 BAG3O95817 575 aa13.13□□□□□ -0.31
HNRNPC-230ENST00000557201 HMGCRP04035 888 aa13.13□□□□□ -0.31
HNRNPC-230ENST00000557201 ASNSP08243 561 aa13.13□□□□□ -0.31
HNRNPC-230ENST00000557201 MNX1P50219 401 aaPredicted RBP13.13□□□□□ -0.31
HNRNPC-230ENST00000557201 MTMR2Q13614 643 aa13.13□□□□□ -0.31
HNRNPC-230ENST00000557201 TTC39AQ5SRH9 613 aa13.13□□□□□ -0.31
HNRNPC-230ENST00000557201 FOXP4Q8IVH2 680 aaPredicted RBP13.13□□□□□ -0.31
HNRNPC-230ENST00000557201 MAPKAPK5Q8IW41 473 aa13.13□□□□□ -0.31
HNRNPC-230ENST00000557201 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.13□□□□□ -0.319e-29■■■■□ 21.1
HNRNPC-230ENST00000557201 PIH1D3Q9NQM4 214 aaKnown RBP13.13□□□□□ -0.31
HNRNPC-230ENST00000557201 GINM1Q9NU53 330 aa13.13□□□□□ -0.31
HNRNPC-230ENST00000557201 ZAP70P43403 619 aa13.12□□□□□ -0.31
HNRNPC-230ENST00000557201 TRIM32Q13049 653 aa13.12□□□□□ -0.31
HNRNPC-230ENST00000557201 CCDC158Q5M9N0 1113 aa13.12□□□□□ -0.31
HNRNPC-230ENST00000557201 POTEEQ6S8J3 1075 aa13.12□□□□□ -0.31
HNRNPC-230ENST00000557201 DIS3LQ8TF46 1054 aaKnown RBP13.12□□□□□ -0.31
HNRNPC-230ENST00000557201 PAWRQ96IZ0 340 aaKnown RBP13.12□□□□□ -0.31
HNRNPC-230ENST00000557201 P2RX7Q99572 595 aaKnown RBP13.12□□□□□ -0.31
HNRNPC-230ENST00000557201 TXNRD2Q9NNW7 524 aa13.12□□□□□ -0.31
HNRNPC-230ENST00000557201 DBNLQ9UJU6 430 aaKnown RBP13.12□□□□□ -0.31
HNRNPC-230ENST00000557201 TAOK2Q9UL54 1235 aa13.12□□□□□ -0.31
HNRNPC-230ENST00000557201 PALD1Q9ULE6 856 aa13.12□□□□□ -0.31
HNRNPC-230ENST00000557201 LAMA3Q16787 3333 aa13.12□□□□□ -0.31
HNRNPC-230ENST00000557201 ALPK3Q96L96 1907 aa13.11□□□□□ -0.31
HNRNPC-230ENST00000557201 A0A1W2PPC1 479 aa13.11□□□□□ -0.31
HNRNPC-230ENST00000557201 C19orf81C9J6K1 198 aa13.11□□□□□ -0.31
HNRNPC-230ENST00000557201 PEX10O60683 326 aa13.11□□□□□ -0.31
HNRNPC-230ENST00000557201 SURF6O75683 361 aaKnown RBP13.11□□□□□ -0.31
HNRNPC-230ENST00000557201 MS4A1P11836 297 aa13.11□□□□□ -0.31
HNRNPC-230ENST00000557201 MAP3K21Q5TCX8 1036 aa13.11□□□□□ -0.31
HNRNPC-230ENST00000557201 ANKLE1Q8NAG6 615 aa13.11□□□□□ -0.31
HNRNPC-230ENST00000557201 TRIB2Q92519 343 aa13.11□□□□□ -0.31
HNRNPC-230ENST00000557201 NOL10Q9BSC4 688 aaKnown RBP13.11□□□□□ -0.31
HNRNPC-230ENST00000557201 TLR7Q9NYK1 1049 aaKnown RBP13.11□□□□□ -0.31
HNRNPC-230ENST00000557201 RBPJLQ9UBG7 517 aa13.11□□□□□ -0.31
HNRNPC-230ENST00000557201 ZBTB21Q9ULJ3 1066 aa13.11□□□□□ -0.31
HNRNPC-230ENST00000557201 MYO5AQ9Y4I1 1855 aaKnown RBP13.11□□□□□ -0.31
HNRNPC-230ENST00000557201 RPTORQ8N122 1335 aa13.11□□□□□ -0.31
HNRNPC-230ENST00000557201 USP17L10C9JJH3 530 aa13.1□□□□□ -0.31
HNRNPC-230ENST00000557201 EVI5O60447 810 aa13.1□□□□□ -0.31
HNRNPC-230ENST00000557201 RLBP1P12271 317 aa13.1□□□□□ -0.31
HNRNPC-230ENST00000557201 XRCC5P13010 732 aaKnown RBP13.1□□□□□ -0.31
HNRNPC-230ENST00000557201 HERVK_113P62684 666 aa13.1□□□□□ -0.31
HNRNPC-230ENST00000557201 DYNLL1P63167 89 aaKnown RBP13.1□□□□□ -0.31
HNRNPC-230ENST00000557201 PDE3AQ14432 1141 aa13.1□□□□□ -0.31
HNRNPC-230ENST00000557201 NECAB2Q7Z6G3 386 aa13.1□□□□□ -0.31
HNRNPC-230ENST00000557201 USP6NLQ92738 828 aa13.1□□□□□ -0.31
HNRNPC-230ENST00000557201 EAF2Q96CJ1 260 aaPredicted RBP13.1□□□□□ -0.31
HNRNPC-230ENST00000557201 C1orf115Q9H7X2 142 aa13.1□□□□□ -0.31
HNRNPC-230ENST00000557201 EMILIN3Q9NT22 766 aa13.1□□□□□ -0.31
HNRNPC-230ENST00000557201 GDF11O95390 407 aa13.09□□□□□ -0.31
HNRNPC-230ENST00000557201 IRX3P78415 501 aaPredicted RBP13.09□□□□□ -0.31
HNRNPC-230ENST00000557201 Q3C1V9 767 aa13.09□□□□□ -0.31
HNRNPC-230ENST00000557201 TATDN1Q6P1N9 297 aa13.09□□□□□ -0.31
HNRNPC-230ENST00000557201 FTSJ3Q8IY81 847 aaKnown RBP13.09□□□□□ -0.31
HNRNPC-230ENST00000557201 GPRC5AQ8NFJ5 357 aa13.09□□□□□ -0.31
HNRNPC-230ENST00000557201 HMX1Q9NP08 348 aaPredicted RBP13.09□□□□□ -0.31
HNRNPC-230ENST00000557201 TMOD4Q9NZQ9 345 aa13.09□□□□□ -0.31
HNRNPC-230ENST00000557201 SAP30BPQ9UHR5 308 aaKnown RBP13.09□□□□□ -0.31
HNRNPC-230ENST00000557201 OGDHLQ9ULD0 1010 aa13.09□□□□□ -0.31
HNRNPC-230ENST00000557201 OS9Q13438 667 aaPredicted RBP13.08□□□□□ -0.31
HNRNPC-230ENST00000557201 CRACR2BQ8N4Y2 399 aaPredicted RBP13.08□□□□□ -0.31
HNRNPC-230ENST00000557201 C12orf42Q96LP6 360 aa13.08□□□□□ -0.31
HNRNPC-230ENST00000557201 CCDC8Q9H0W5 538 aaPredicted RBP13.08□□□□□ -0.31
HNRNPC-230ENST00000557201 STAP2Q9UGK3 403 aa13.08□□□□□ -0.31
HNRNPC-230ENST00000557201 SOX1O00570 391 aaPredicted RBP13.07□□□□□ -0.32
HNRNPC-230ENST00000557201 CYP2B6P20813 491 aa13.07□□□□□ -0.32
HNRNPC-230ENST00000557201 CYP7A1P22680 504 aa13.07□□□□□ -0.32
HNRNPC-230ENST00000557201 ERVK-9P63128 1117 aa13.07□□□□□ -0.32
HNRNPC-230ENST00000557201 ERVK-24P63145 666 aa13.07□□□□□ -0.32
HNRNPC-230ENST00000557201 MORN1Q5T089 497 aa13.07□□□□□ -0.32
HNRNPC-230ENST00000557201 SOCS4Q8WXH5 440 aa13.07□□□□□ -0.32
HNRNPC-230ENST00000557201 GDF15Q99988 308 aa13.07□□□□□ -0.32
HNRNPC-230ENST00000557201 NUDT12Q9BQG2 462 aa13.07□□□□□ -0.32
HNRNPC-230ENST00000557201 EHD4Q9H223 541 aa13.07□□□□□ -0.32
HNRNPC-230ENST00000557201 PORCNQ9H237 461 aa13.07□□□□□ -0.32
HNRNPC-230ENST00000557201 ANTXR1Q9H6X2 564 aa13.07□□□□□ -0.32
HNRNPC-230ENST00000557201 CNMDO75829 334 aa13.07□□□□□ -0.32
HNRNPC-230ENST00000557201 GH2P01242 217 aa13.07□□□□□ -0.32
HNRNPC-230ENST00000557201 HLA-DOAP06340 250 aa13.07□□□□□ -0.32
HNRNPC-230ENST00000557201 PRKAR2AP13861 404 aaKnown RBP13.07□□□□□ -0.32
HNRNPC-230ENST00000557201 MAPK4P31152 587 aa13.07□□□□□ -0.32
HNRNPC-230ENST00000557201 BMP8BP34820 402 aa13.07□□□□□ -0.32
HNRNPC-230ENST00000557201 RRP1P56182 461 aaKnown RBP13.07□□□□□ -0.32
HNRNPC-230ENST00000557201 CEP85Q6P2H3 762 aa13.07□□□□□ -0.32
HNRNPC-230ENST00000557201 USP17L2Q6R6M4 530 aa13.07□□□□□ -0.32
HNRNPC-230ENST00000557201 CERS3Q8IU89 383 aa13.07□□□□□ -0.32
HNRNPC-230ENST00000557201 MIGA1Q8NAN2 632 aa13.07□□□□□ -0.32
HNRNPC-230ENST00000557201 GTF3C2Q8WUA4 911 aaPredicted RBP13.07□□□□□ -0.32
HNRNPC-230ENST00000557201 NBPF3Q9H094 633 aa13.07□□□□□ -0.32
HNRNPC-230ENST00000557201 NDUFB9Q9Y6M9 179 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms