RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 MAP2K5Q13163 448 aa15.74■□□□□ 0.11
PSEN1-220ENST00000557037 ANO1Q5XXA6 986 aa15.74■□□□□ 0.11
PSEN1-220ENST00000557037 EDC3Q96F86 508 aaKnown RBP15.74■□□□□ 0.11
PSEN1-220ENST00000557037 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.74■□□□□ 0.11
PSEN1-220ENST00000557037 C9orf78Q9NZ63 289 aaPredicted RBP15.74■□□□□ 0.11
PSEN1-220ENST00000557037 GRXCR1A8MXD5 290 aa15.73■□□□□ 0.11
PSEN1-220ENST00000557037 KBTBD13C9JR72 458 aa15.73■□□□□ 0.11
PSEN1-220ENST00000557037 MSCO60682 206 aa15.73■□□□□ 0.11
PSEN1-220ENST00000557037 IFIT1P09914 478 aaKnown RBP15.73■□□□□ 0.11
PSEN1-220ENST00000557037 CYP2C19P33261 490 aa15.73■□□□□ 0.11
PSEN1-220ENST00000557037 ADCYAP1R1P41586 468 aa15.73■□□□□ 0.11
PSEN1-220ENST00000557037 TFF2Q03403 129 aa15.73■□□□□ 0.11
PSEN1-220ENST00000557037 MTMR2Q13614 643 aa15.73■□□□□ 0.11
PSEN1-220ENST00000557037 RRP1BQ14684 758 aaKnown RBP15.73■□□□□ 0.11
PSEN1-220ENST00000557037 SNX17Q15036 470 aa15.73■□□□□ 0.11
PSEN1-220ENST00000557037 ARRDC4Q8NCT1 418 aa15.73■□□□□ 0.11
PSEN1-220ENST00000557037 SUCLG2Q96I99 432 aa15.73■□□□□ 0.11
PSEN1-220ENST00000557037 RFX7Q2KHR2 1363 aa15.73■□□□□ 0.11
PSEN1-220ENST00000557037 MYH13Q9UKX3 1938 aa15.72■□□□□ 0.11
PSEN1-220ENST00000557037 UTYO14607 1347 aa15.72■□□□□ 0.11
PSEN1-220ENST00000557037 FAM86C2PA6NEL3 165 aa15.72■□□□□ 0.11
PSEN1-220ENST00000557037 USP17L5A8MUK1 530 aa15.72■□□□□ 0.11
PSEN1-220ENST00000557037 ATP2B2Q01814 1243 aa15.72■□□□□ 0.11
PSEN1-220ENST00000557037 FPGSQ05932 587 aa15.72■□□□□ 0.11
PSEN1-220ENST00000557037 RALBP1Q15311 655 aa15.72■□□□□ 0.11
PSEN1-220ENST00000557037 SH3D19Q5HYK7 790 aa15.72■□□□□ 0.11
PSEN1-220ENST00000557037 CCDC129Q6ZRS4 1044 aa15.72■□□□□ 0.11
PSEN1-220ENST00000557037 TMOD4Q9NZQ9 345 aa15.72■□□□□ 0.11
PSEN1-220ENST00000557037 RAG1P15918 1043 aa15.71■□□□□ 0.11
PSEN1-220ENST00000557037 KCNQ1P51787 676 aa15.71■□□□□ 0.11
PSEN1-220ENST00000557037 NCBP3Q53F19 620 aaKnown RBP15.71■□□□□ 0.11
PSEN1-220ENST00000557037 WDR78Q5VTH9 848 aa15.71■□□□□ 0.11
PSEN1-220ENST00000557037 KLHDC4Q8TBB5 520 aa15.71■□□□□ 0.11
PSEN1-220ENST00000557037 KAZALD1Q96I82 304 aa15.71■□□□□ 0.11
PSEN1-220ENST00000557037 OSBPL5Q9H0X9 879 aaPredicted RBP15.71■□□□□ 0.11
PSEN1-220ENST00000557037 CXXC1Q9P0U4 656 aaPredicted RBP15.71■□□□□ 0.11
PSEN1-220ENST00000557037 PLXNA1Q9UIW2 1896 aa15.71■□□□□ 0.11
PSEN1-220ENST00000557037 FGFR2P21802 821 aa15.7■□□□□ 0.1
PSEN1-220ENST00000557037 HOXA7P31268 230 aaPredicted RBP15.7■□□□□ 0.1
PSEN1-220ENST00000557037 PUM3Q15397 648 aaKnown RBP15.7■□□□□ 0.1
PSEN1-220ENST00000557037 MICALL1Q8N3F8 863 aa15.7■□□□□ 0.1
PSEN1-220ENST00000557037 PBX4Q9BYU1 374 aa15.7■□□□□ 0.1
PSEN1-220ENST00000557037 TACC3Q9Y6A5 838 aa15.7■□□□□ 0.1
PSEN1-220ENST00000557037 MYH2Q9UKX2 1941 aa15.7■□□□□ 0.1
PSEN1-220ENST00000557037 ATAD5Q96QE3 1844 aa15.69■□□□□ 0.1
PSEN1-220ENST00000557037 TBC1D12O60347 775 aa15.69■□□□□ 0.1
PSEN1-220ENST00000557037 CLTBP09497 229 aa15.69■□□□□ 0.1
PSEN1-220ENST00000557037 CAP2P40123 477 aa15.69■□□□□ 0.1
PSEN1-220ENST00000557037 MRE11P49959 708 aa15.69■□□□□ 0.1
PSEN1-220ENST00000557037 NPLOC4Q8TAT6 608 aa15.69■□□□□ 0.1
PSEN1-220ENST00000557037 TBC1D2Q9BYX2 928 aa15.69■□□□□ 0.1
PSEN1-220ENST00000557037 TSPYL2Q9H2G4 693 aaPredicted RBP15.69■□□□□ 0.1
PSEN1-220ENST00000557037 AS3MTQ9HBK9 375 aa15.69■□□□□ 0.1
PSEN1-220ENST00000557037 C11orf16Q9NQ32 467 aa15.69■□□□□ 0.1
PSEN1-220ENST00000557037 KIF16BQ96L93 1317 aa15.68■□□□□ 0.1
PSEN1-220ENST00000557037 KIAA0355O15063 1070 aa15.68■□□□□ 0.1
PSEN1-220ENST00000557037 CYBAP13498 195 aa15.68■□□□□ 0.1
PSEN1-220ENST00000557037 SLC5A1P13866 664 aa15.68■□□□□ 0.1
PSEN1-220ENST00000557037 BTDP43251 543 aa15.68■□□□□ 0.1
PSEN1-220ENST00000557037 BACE1P56817 501 aa15.68■□□□□ 0.1
PSEN1-220ENST00000557037 GAKO14976 1311 aa15.68■□□□□ 0.1
PSEN1-220ENST00000557037 PQBP1O60828 265 aaKnown RBP15.67■□□□□ 0.1
PSEN1-220ENST00000557037 GLRX3O76003 335 aaKnown RBP15.67■□□□□ 0.1
PSEN1-220ENST00000557037 KHSRPQ92945 711 aaKnown RBP eCLIP15.67■□□□□ 0.11e-7■■■■□ 24
PSEN1-220ENST00000557037 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.67■□□□□ 0.15e-12■□□□□ 10.8
PSEN1-220ENST00000557037 BICC1Q9H694 974 aaKnown RBP15.67■□□□□ 0.1
PSEN1-220ENST00000557037 TMEM39AQ9NV64 488 aa15.67■□□□□ 0.1
PSEN1-220ENST00000557037 MYBBP1AQ9BQG0 1328 aaKnown RBP15.67■□□□□ 0.1
PSEN1-220ENST00000557037 SLC15A5A6NIM6 579 aa15.66■□□□□ 0.1
PSEN1-220ENST00000557037 PTPREP23469 700 aa15.66■□□□□ 0.1
PSEN1-220ENST00000557037 LRRC41Q15345 812 aa15.66■□□□□ 0.1
PSEN1-220ENST00000557037 C1orf53Q5VUE5 145 aa15.66■□□□□ 0.1
PSEN1-220ENST00000557037 WDR18Q9BV38 432 aa15.66■□□□□ 0.1
PSEN1-220ENST00000557037 GPR37L1O60883 481 aa15.65■□□□□ 0.1
PSEN1-220ENST00000557037 CNMDO75829 334 aa15.65■□□□□ 0.1
PSEN1-220ENST00000557037 NBPF7P0C2Y1 421 aaPredicted RBP15.65■□□□□ 0.1
PSEN1-220ENST00000557037 SKIV2LQ15477 1246 aaKnown RBP15.65■□□□□ 0.1
PSEN1-220ENST00000557037 AAK1Q2M2I8 961 aa15.65■□□□□ 0.1
PSEN1-220ENST00000557037 SLC4A10Q6U841 1118 aa15.65■□□□□ 0.1
PSEN1-220ENST00000557037 DZIP1Q86YF9 867 aaKnown RBP15.65■□□□□ 0.1
PSEN1-220ENST00000557037 ANKRD44Q8N8A2 993 aa15.65■□□□□ 0.1
PSEN1-220ENST00000557037 PRRC2BQ5JSZ5 2229 aaKnown RBP15.64■□□□□ 0.09
PSEN1-220ENST00000557037 CHD7Q9P2D1 2997 aa15.64■□□□□ 0.09
PSEN1-220ENST00000557037 HOXC6P09630 235 aa15.64■□□□□ 0.09
PSEN1-220ENST00000557037 CCNA1P78396 465 aa15.64■□□□□ 0.09
PSEN1-220ENST00000557037 JAG1P78504 1218 aa15.64■□□□□ 0.09
PSEN1-220ENST00000557037 SHROOM1Q2M3G4 852 aaPredicted RBP15.64■□□□□ 0.09
PSEN1-220ENST00000557037 PRAMEF19Q5SWL8 479 aa15.64■□□□□ 0.09
PSEN1-220ENST00000557037 GTF3C2Q8WUA4 911 aaPredicted RBP15.64■□□□□ 0.09
PSEN1-220ENST00000557037 LPIN2Q92539 896 aa15.64■□□□□ 0.09
PSEN1-220ENST00000557037 NKX2-4Q9H2Z4 354 aa15.64■□□□□ 0.09
PSEN1-220ENST00000557037 GNL3LQ9NVN8 582 aaKnown RBP15.64■□□□□ 0.09
PSEN1-220ENST00000557037 IVNS1ABPQ9Y6Y0 642 aa15.64■□□□□ 0.09
PSEN1-220ENST00000557037 REV3LO60673 3130 aa15.64■□□□□ 0.09
PSEN1-220ENST00000557037 SALL1Q9NSC2 1324 aa15.64■□□□□ 0.09
PSEN1-220ENST00000557037 ALDH1L1O75891 902 aa15.63■□□□□ 0.09
PSEN1-220ENST00000557037 GRB14Q14449 540 aa15.63■□□□□ 0.09
PSEN1-220ENST00000557037 FAM47AQ5JRC9 791 aa15.63■□□□□ 0.09
PSEN1-220ENST00000557037 C16orf59Q7L2K0 433 aa15.63■□□□□ 0.09
PSEN1-220ENST00000557037 SRCIN1Q9C0H9 1055 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms