RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 ZKSCAN2Q63HK3 967 aa15.69■□□□□ 0.1
PSEN1-219ENST00000556951 ZSCAN29Q8IWY8 852 aaPredicted RBP15.69■□□□□ 0.1
PSEN1-219ENST00000556951 ZNF384Q8TF68 577 aa15.69■□□□□ 0.1
PSEN1-219ENST00000556951 FRAT1Q92837 279 aaPredicted RBP15.69■□□□□ 0.1
PSEN1-219ENST00000556951 ASCC2Q9H1I8 757 aaPredicted RBP15.69■□□□□ 0.1
PSEN1-219ENST00000556951 DENND2AQ9ULE3 1009 aa15.69■□□□□ 0.1
PSEN1-219ENST00000556951 DOCK1Q14185 1865 aa15.68■□□□□ 0.1
PSEN1-219ENST00000556951 FAM196BA6NMK8 535 aa15.68■□□□□ 0.1
PSEN1-219ENST00000556951 PEX10O60683 326 aa15.68■□□□□ 0.1
PSEN1-219ENST00000556951 RHBDL3P58872 404 aa15.68■□□□□ 0.1
PSEN1-219ENST00000556951 ATP2B3Q16720 1220 aa15.68■□□□□ 0.1
PSEN1-219ENST00000556951 SH3D19Q5HYK7 790 aa15.68■□□□□ 0.1
PSEN1-219ENST00000556951 C20orf194Q5TEA3 1177 aa15.68■□□□□ 0.1
PSEN1-219ENST00000556951 MORF4L1Q9UBU8 362 aa15.68■□□□□ 0.1
PSEN1-219ENST00000556951 MYH2Q9UKX2 1941 aa15.68■□□□□ 0.1
PSEN1-219ENST00000556951 SEMA3EO15041 775 aa15.67■□□□□ 0.1
PSEN1-219ENST00000556951 ADORA1P30542 326 aa15.67■□□□□ 0.1
PSEN1-219ENST00000556951 NHLH1Q02575 133 aa15.67■□□□□ 0.1
PSEN1-219ENST00000556951 LHX8Q68G74 356 aa15.67■□□□□ 0.1
PSEN1-219ENST00000556951 EXOC6Q8TAG9 804 aa15.67■□□□□ 0.1
PSEN1-219ENST00000556951 ARHGAP45Q92619 1136 aa15.67■□□□□ 0.1
PSEN1-219ENST00000556951 CRBNQ96SW2 442 aa15.67■□□□□ 0.1
PSEN1-219ENST00000556951 GNL3LQ9NVN8 582 aaKnown RBP15.67■□□□□ 0.1
PSEN1-219ENST00000556951 PNMA3Q9UL41 463 aa15.67■□□□□ 0.1
PSEN1-219ENST00000556951 NOB1Q9ULX3 412 aaKnown RBP15.67■□□□□ 0.1
PSEN1-219ENST00000556951 WDFY4Q6ZS81 3184 aa15.66■□□□□ 0.1
PSEN1-219ENST00000556951 GPR75-ASB3A0A0A6YYF3 556 aa15.66■□□□□ 0.1
PSEN1-219ENST00000556951 CIAO1O76071 339 aa15.66■□□□□ 0.1
PSEN1-219ENST00000556951 CYP2B6P20813 491 aa15.66■□□□□ 0.1
PSEN1-219ENST00000556951 BTDP43251 543 aa15.66■□□□□ 0.1
PSEN1-219ENST00000556951 HMGCS2P54868 508 aa15.66■□□□□ 0.1
PSEN1-219ENST00000556951 PICALMQ13492 652 aa15.66■□□□□ 0.1
PSEN1-219ENST00000556951 CCDC102BQ68D86 513 aa15.66■□□□□ 0.1
PSEN1-219ENST00000556951 ZNF280CQ8ND82 737 aa15.66■□□□□ 0.1
PSEN1-219ENST00000556951 USP6NLQ92738 828 aa15.66■□□□□ 0.1
PSEN1-219ENST00000556951 OSBPL5Q9H0X9 879 aaPredicted RBP15.66■□□□□ 0.1
PSEN1-219ENST00000556951 CEP126Q9P2H0 1117 aa15.66■□□□□ 0.1
PSEN1-219ENST00000556951 NPM3O75607 178 aaKnown RBP15.65■□□□□ 0.1
PSEN1-219ENST00000556951 CACNB2Q08289 660 aaPredicted RBP15.65■□□□□ 0.1
PSEN1-219ENST00000556951 RASGRF1Q13972 1273 aa15.65■□□□□ 0.1
PSEN1-219ENST00000556951 SIL1Q9H173 461 aa15.65■□□□□ 0.1
PSEN1-219ENST00000556951 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.65■□□□□ 0.1
PSEN1-219ENST00000556951 TXNRD2Q9NNW7 524 aa15.65■□□□□ 0.1
PSEN1-219ENST00000556951 FBXO3Q9UK99 471 aa15.65■□□□□ 0.1
PSEN1-219ENST00000556951 FAM86C2PA6NEL3 165 aa15.64■□□□□ 0.09
PSEN1-219ENST00000556951 SMIM22K7EJ46 135 aa15.64■□□□□ 0.09
PSEN1-219ENST00000556951 XRCC5P13010 732 aaKnown RBP15.64■□□□□ 0.09
PSEN1-219ENST00000556951 PRKAR2AP13861 404 aaKnown RBP15.64■□□□□ 0.09
PSEN1-219ENST00000556951 CAP2P40123 477 aa15.64■□□□□ 0.09
PSEN1-219ENST00000556951 JAG1P78504 1218 aa15.64■□□□□ 0.09
PSEN1-219ENST00000556951 MYO9BQ13459 2157 aa15.64■□□□□ 0.09
PSEN1-219ENST00000556951 Q3C1V9 767 aa15.64■□□□□ 0.09
PSEN1-219ENST00000556951 ATF7IPQ6VMQ6 1270 aa15.64■□□□□ 0.09
PSEN1-219ENST00000556951 GAS2L1Q99501 681 aaPredicted RBP15.64■□□□□ 0.09
PSEN1-219ENST00000556951 PRKAG2Q9UGJ0 569 aa15.64■□□□□ 0.09
PSEN1-219ENST00000556951 LOC285556D6RIA3 1793 aa15.64■□□□□ 0.09
PSEN1-219ENST00000556951 CFAP54Q96N23 3096 aa15.63■□□□□ 0.09
PSEN1-219ENST00000556951 TIMM10P62072 90 aa15.63■□□□□ 0.09
PSEN1-219ENST00000556951 MECOMQ03112 1051 aa15.63■□□□□ 0.09
PSEN1-219ENST00000556951 ZGPATQ8N5A5 531 aaKnown RBP15.63■□□□□ 0.09
PSEN1-219ENST00000556951 PANK1Q8TE04 598 aa15.63■□□□□ 0.09
PSEN1-219ENST00000556951 ZNF576Q9H609 170 aa15.63■□□□□ 0.09
PSEN1-219ENST00000556951 CXXC1Q9P0U4 656 aaPredicted RBP15.63■□□□□ 0.09
PSEN1-219ENST00000556951 RBPJLQ9UBG7 517 aa15.63■□□□□ 0.09
PSEN1-219ENST00000556951 ABCF2Q9UG63 623 aa15.63■□□□□ 0.09
PSEN1-219ENST00000556951 PA2G4Q9UQ80 394 aaKnown RBP15.63■□□□□ 0.09
PSEN1-219ENST00000556951 MROH7-TTC4A0A0A0MT08 1334 aa15.63■□□□□ 0.09
PSEN1-219ENST00000556951 PTPRCP08575 1304 aa15.63■□□□□ 0.09
PSEN1-219ENST00000556951 USP34Q70CQ2 3546 aa15.63■□□□□ 0.09
PSEN1-219ENST00000556951 CHD9Q3L8U1 2897 aa15.62■□□□□ 0.09
PSEN1-219ENST00000556951 USP17L5A8MUK1 530 aa15.62■□□□□ 0.09
PSEN1-219ENST00000556951 CCND3P30281 292 aaPredicted RBP15.62■□□□□ 0.09
PSEN1-219ENST00000556951 HOXA7P31268 230 aaPredicted RBP15.62■□□□□ 0.09
PSEN1-219ENST00000556951 PABPC4Q13310 644 aaKnown RBP eCLIP15.62■□□□□ 0.09
PSEN1-219ENST00000556951 CCL14Q16627 93 aa15.62■□□□□ 0.09
PSEN1-219ENST00000556951 WDR18Q9BV38 432 aa15.62■□□□□ 0.09
PSEN1-219ENST00000556951 API5Q9BZZ5 524 aaKnown RBP15.62■□□□□ 0.09
PSEN1-219ENST00000556951 PDS5AQ29RF7 1337 aaKnown RBP15.62■□□□□ 0.09
PSEN1-219ENST00000556951 TRIM27P14373 513 aa15.61■□□□□ 0.09
PSEN1-219ENST00000556951 DNAJB2P25686 324 aa15.61■□□□□ 0.09
PSEN1-219ENST00000556951 AAMPQ13685 434 aa15.61■□□□□ 0.09
PSEN1-219ENST00000556951 CCDC85BQ15834 202 aaPredicted RBP15.61■□□□□ 0.09
PSEN1-219ENST00000556951 MORN1Q5T089 497 aa15.61■□□□□ 0.09
PSEN1-219ENST00000556951 DZIP1Q86YF9 867 aaKnown RBP15.61■□□□□ 0.09
PSEN1-219ENST00000556951 SLF2Q8IX21 1173 aa15.61■□□□□ 0.09
PSEN1-219ENST00000556951 FTSJ3Q8IY81 847 aaKnown RBP15.61■□□□□ 0.09
PSEN1-219ENST00000556951 NUDT12Q9BQG2 462 aa15.61■□□□□ 0.09
PSEN1-219ENST00000556951 TBC1D2Q9BYX2 928 aa15.61■□□□□ 0.09
PSEN1-219ENST00000556951 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.61■□□□□ 0.09
PSEN1-219ENST00000556951 ZDBF2Q9HCK1 2354 aa15.61■□□□□ 0.09
PSEN1-219ENST00000556951 IL15P40933 162 aaPredicted RBP15.6■□□□□ 0.09
PSEN1-219ENST00000556951 SPTY2D1Q68D10 685 aaPredicted RBP15.6■□□□□ 0.09
PSEN1-219ENST00000556951 PORCNQ9H237 461 aa15.6■□□□□ 0.09
PSEN1-219ENST00000556951 FRMPD3Q5JV73 1810 aa15.59■□□□□ 0.09
PSEN1-219ENST00000556951 RLBP1P12271 317 aa15.59■□□□□ 0.09
PSEN1-219ENST00000556951 BACE1P56817 501 aa15.59■□□□□ 0.09
PSEN1-219ENST00000556951 HERVK_113P62684 666 aa15.59■□□□□ 0.09
PSEN1-219ENST00000556951 SHROOM1Q2M3G4 852 aaPredicted RBP15.59■□□□□ 0.09
PSEN1-219ENST00000556951 GPRC5AQ8NFJ5 357 aa15.59■□□□□ 0.09
PSEN1-219ENST00000556951 KHSRPQ92945 711 aaKnown RBP eCLIP15.59■□□□□ 0.091e-7■■■■□ 24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms