RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 NUDT12Q9BQG2 462 aa11.14□□□□□ -0.63
HNRNPC-227ENST00000556897 API5Q9BZZ5 524 aaKnown RBP11.14□□□□□ -0.63
HNRNPC-227ENST00000556897 MTMR10Q9NXD2 777 aa11.14□□□□□ -0.63
HNRNPC-227ENST00000556897 TMOD4Q9NZQ9 345 aa11.14□□□□□ -0.63
HNRNPC-227ENST00000556897 PI4KBQ9UBF8 816 aa11.14□□□□□ -0.63
HNRNPC-227ENST00000556897 HERC5Q9UII4 1024 aaKnown RBP11.14□□□□□ -0.63
HNRNPC-227ENST00000556897 ASNSP08243 561 aa11.13□□□□□ -0.63
HNRNPC-227ENST00000556897 ZKSCAN1P17029 563 aaPredicted RBP11.13□□□□□ -0.63
HNRNPC-227ENST00000556897 HOXA7P31268 230 aaPredicted RBP11.13□□□□□ -0.63
HNRNPC-227ENST00000556897 HERVK_113P62684 666 aa11.13□□□□□ -0.63
HNRNPC-227ENST00000556897 SHROOM1Q2M3G4 852 aaPredicted RBP11.13□□□□□ -0.63
HNRNPC-227ENST00000556897 WDR18Q9BV38 432 aa11.13□□□□□ -0.63
HNRNPC-227ENST00000556897 LRP2BPQ9P2M1 347 aa11.13□□□□□ -0.63
HNRNPC-227ENST00000556897 VCANP13611 3396 aa11.12□□□□□ -0.63
HNRNPC-227ENST00000556897 COL6A1P12109 1028 aa11.12□□□□□ -0.63
HNRNPC-227ENST00000556897 ARID4AP29374 1257 aaPredicted RBP11.12□□□□□ -0.63
HNRNPC-227ENST00000556897 CCND3P30281 292 aaPredicted RBP11.12□□□□□ -0.63
HNRNPC-227ENST00000556897 MCAMP43121 646 aa11.12□□□□□ -0.63
HNRNPC-227ENST00000556897 CACNB2Q08289 660 aaPredicted RBP11.12□□□□□ -0.63
HNRNPC-227ENST00000556897 MTX1Q13505 466 aa11.12□□□□□ -0.63
HNRNPC-227ENST00000556897 PDE3AQ14432 1141 aa11.12□□□□□ -0.63
HNRNPC-227ENST00000556897 CCL14Q16627 93 aa11.12□□□□□ -0.63
HNRNPC-227ENST00000556897 Q3C1V9 767 aa11.12□□□□□ -0.63
HNRNPC-227ENST00000556897 MAPKAPK5Q8IW41 473 aa11.12□□□□□ -0.63
HNRNPC-227ENST00000556897 CCAR1Q8IX12 1150 aaKnown RBP11.12□□□□□ -0.63
HNRNPC-227ENST00000556897 PORCNQ9H237 461 aa11.12□□□□□ -0.63
HNRNPC-227ENST00000556897 DHX36Q9H2U1 1008 aaKnown RBP11.12□□□□□ -0.63
HNRNPC-227ENST00000556897 DNAJC18Q9H819 358 aa11.12□□□□□ -0.63
HNRNPC-227ENST00000556897 AATFQ9NY61 560 aaKnown RBP eCLIP11.12□□□□□ -0.63
HNRNPC-227ENST00000556897 RBPJLQ9UBG7 517 aa11.12□□□□□ -0.63
HNRNPC-227ENST00000556897 ZNF316A6NFI3 1004 aaPredicted RBP11.11□□□□□ -0.63
HNRNPC-227ENST00000556897 C19orf81C9J6K1 198 aa11.11□□□□□ -0.63
HNRNPC-227ENST00000556897 USP17L10C9JJH3 530 aa11.11□□□□□ -0.63
HNRNPC-227ENST00000556897 GDF11O95390 407 aa11.11□□□□□ -0.63
HNRNPC-227ENST00000556897 BAG3O95817 575 aa11.11□□□□□ -0.63
HNRNPC-227ENST00000556897 MAPK4P31152 587 aa11.11□□□□□ -0.63
HNRNPC-227ENST00000556897 RGS2P41220 211 aa11.11□□□□□ -0.63
HNRNPC-227ENST00000556897 ERVK-9P63128 1117 aa11.11□□□□□ -0.63
HNRNPC-227ENST00000556897 ERVK-24P63145 666 aa11.11□□□□□ -0.63
HNRNPC-227ENST00000556897 MDM2Q00987 491 aaPredicted RBP11.11□□□□□ -0.63
HNRNPC-227ENST00000556897 LRRC26Q2I0M4 334 aa11.11□□□□□ -0.63
HNRNPC-227ENST00000556897 LHX8Q68G74 356 aa11.11□□□□□ -0.63
HNRNPC-227ENST00000556897 POTEEQ6S8J3 1075 aa11.11□□□□□ -0.63
HNRNPC-227ENST00000556897 GPR142Q7Z601 462 aa11.11□□□□□ -0.63
HNRNPC-227ENST00000556897 ADGRA1Q86SQ6 560 aa11.11□□□□□ -0.63
HNRNPC-227ENST00000556897 TRMT44Q8IYL2 757 aaKnown RBP11.11□□□□□ -0.63
HNRNPC-227ENST00000556897 TGFBRAP1Q8WUH2 860 aa11.11□□□□□ -0.63
HNRNPC-227ENST00000556897 USP6NLQ92738 828 aa11.11□□□□□ -0.63
HNRNPC-227ENST00000556897 NOL10Q9BSC4 688 aaKnown RBP11.11□□□□□ -0.63
HNRNPC-227ENST00000556897 PAGR1Q9BTK6 254 aa11.11□□□□□ -0.63
HNRNPC-227ENST00000556897 SNRKQ9NRH2 765 aa11.11□□□□□ -0.63
HNRNPC-227ENST00000556897 PALD1Q9ULE6 856 aa11.11□□□□□ -0.63
HNRNPC-227ENST00000556897 SIPA1L1O43166 1804 aa11.11□□□□□ -0.63
HNRNPC-227ENST00000556897 FLT1P17948 1338 aa11.1□□□□□ -0.63
HNRNPC-227ENST00000556897 GNAI3P08754 354 aa11.1□□□□□ -0.63
HNRNPC-227ENST00000556897 CT47B1P0C2W7 299 aaPredicted RBP11.1□□□□□ -0.63
HNRNPC-227ENST00000556897 MORN1Q5T089 497 aa11.1□□□□□ -0.63
HNRNPC-227ENST00000556897 NAA16Q6N069 864 aaPredicted RBP11.1□□□□□ -0.63
HNRNPC-227ENST00000556897 METTL16Q86W50 562 aaKnown RBP11.1□□□□□ -0.63
HNRNPC-227ENST00000556897 FOXP4Q8IVH2 680 aaPredicted RBP11.1□□□□□ -0.63
HNRNPC-227ENST00000556897 TRMT2AQ8IZ69 625 aaKnown RBP11.1□□□□□ -0.63
HNRNPC-227ENST00000556897 CRACR2BQ8N4Y2 399 aaPredicted RBP11.1□□□□□ -0.63
HNRNPC-227ENST00000556897 APBA2Q99767 749 aa11.1□□□□□ -0.63
HNRNPC-227ENST00000556897 TRIM34Q9BYJ4 488 aa11.1□□□□□ -0.63
HNRNPC-227ENST00000556897 EMILIN3Q9NT22 766 aa11.1□□□□□ -0.63
HNRNPC-227ENST00000556897 ZBTB21Q9ULJ3 1066 aa11.1□□□□□ -0.63
HNRNPC-227ENST00000556897 LAMA2P24043 3122 aaKnown RBP11.09□□□□□ -0.63
HNRNPC-227ENST00000556897 PNMA6EA0A0J9YXQ4 647 aa11.09□□□□□ -0.63
HNRNPC-227ENST00000556897 UQCRFS1P1P0C7P4 283 aa11.09□□□□□ -0.63
HNRNPC-227ENST00000556897 PLCG2P16885 1265 aa11.09□□□□□ -0.63
HNRNPC-227ENST00000556897 G3BP1Q13283 466 aaKnown RBP eCLIP11.09□□□□□ -0.634e-10■□□□□ 8.8
HNRNPC-227ENST00000556897 PLEKHH3Q7Z736 793 aa11.09□□□□□ -0.63
HNRNPC-227ENST00000556897 SAP30BPQ9UHR5 308 aaKnown RBP11.09□□□□□ -0.63
HNRNPC-227ENST00000556897 NDUFB9Q9Y6M9 179 aa11.09□□□□□ -0.63
HNRNPC-227ENST00000556897 RARSP54136 660 aaKnown RBP11.08□□□□□ -0.64
HNRNPC-227ENST00000556897 PPP4CP60510 307 aa11.08□□□□□ -0.64
HNRNPC-227ENST00000556897 MAP2K5Q13163 448 aa11.08□□□□□ -0.64
HNRNPC-227ENST00000556897 ZYXQ15942 572 aaKnown RBP11.08□□□□□ -0.64
HNRNPC-227ENST00000556897 GTF3C2Q8WUA4 911 aaPredicted RBP11.08□□□□□ -0.64
HNRNPC-227ENST00000556897 ARHGAP45Q92619 1136 aa11.08□□□□□ -0.64
HNRNPC-227ENST00000556897 COL25A1Q9BXS0 654 aaPredicted RBP11.08□□□□□ -0.64
HNRNPC-227ENST00000556897 SENP6Q9GZR1 1112 aaPredicted RBP11.08□□□□□ -0.64
HNRNPC-227ENST00000556897 CWC22Q9HCG8 908 aaKnown RBP11.08□□□□□ -0.64
HNRNPC-227ENST00000556897 GINM1Q9NU53 330 aa11.08□□□□□ -0.64
HNRNPC-227ENST00000556897 FLRT1Q9NZU1 646 aa11.08□□□□□ -0.64
HNRNPC-227ENST00000556897 CDH23Q9H251 3354 aa11.07□□□□□ -0.64
HNRNPC-227ENST00000556897 DNAH12Q6ZR08 3092 aa11.07□□□□□ -0.64
HNRNPC-227ENST00000556897 POTEB2H3BUK9 544 aa11.07□□□□□ -0.64
HNRNPC-227ENST00000556897 CNMDO75829 334 aa11.07□□□□□ -0.64
HNRNPC-227ENST00000556897 GH2P01242 217 aa11.07□□□□□ -0.64
HNRNPC-227ENST00000556897 GNAI2P04899 355 aa11.07□□□□□ -0.64
HNRNPC-227ENST00000556897 CYP2E1P05181 493 aaPredicted RBP11.07□□□□□ -0.64
HNRNPC-227ENST00000556897 HLA-DOAP06340 250 aa11.07□□□□□ -0.64
HNRNPC-227ENST00000556897 TTC39AQ5SRH9 613 aa11.07□□□□□ -0.64
HNRNPC-227ENST00000556897 WDR78Q5VTH9 848 aa11.07□□□□□ -0.64
HNRNPC-227ENST00000556897 USP17L2Q6R6M4 530 aa11.07□□□□□ -0.64
HNRNPC-227ENST00000556897 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.07□□□□□ -0.64
HNRNPC-227ENST00000556897 EDC3Q96F86 508 aaKnown RBP11.07□□□□□ -0.64
HNRNPC-227ENST00000556897 FAM161BQ96MY7 647 aa11.07□□□□□ -0.64
HNRNPC-227ENST00000556897 GUCD1Q96NT3 240 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms