RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 MNX1P50219 401 aaPredicted RBP16.92■□□□□ 0.3
SLIRP-207ENST00000556831 PDE1AP54750 535 aa16.92■□□□□ 0.3
SLIRP-207ENST00000556831 CFHR5Q9BXR6 569 aa16.92■□□□□ 0.3
SLIRP-207ENST00000556831 ZCCHC17Q9NP64 241 aaKnown RBP16.92■□□□□ 0.3
SLIRP-207ENST00000556831 GINM1Q9NU53 330 aa16.92■□□□□ 0.3
SLIRP-207ENST00000556831 KCNH4Q9UQ05 1017 aa16.92■□□□□ 0.3
SLIRP-207ENST00000556831 TRIM75PA6NK02 468 aa16.91■□□□□ 0.3
SLIRP-207ENST00000556831 USP17L5A8MUK1 530 aa16.91■□□□□ 0.3
SLIRP-207ENST00000556831 TRIM6-TRIM34B2RNG4 842 aa16.91■□□□□ 0.3
SLIRP-207ENST00000556831 PRKAB2O43741 272 aa16.91■□□□□ 0.3
SLIRP-207ENST00000556831 FKTNO75072 461 aa16.91■□□□□ 0.3
SLIRP-207ENST00000556831 GNAT2P19087 354 aa16.91■□□□□ 0.3
SLIRP-207ENST00000556831 NUCB1Q02818 461 aa16.91■□□□□ 0.3
SLIRP-207ENST00000556831 GADL1Q6ZQY3 521 aa16.91■□□□□ 0.3
SLIRP-207ENST00000556831 EVI5LQ96CN4 794 aa16.91■□□□□ 0.3
SLIRP-207ENST00000556831 PUS7LQ9H0K6 701 aaKnown RBP16.91■□□□□ 0.3
SLIRP-207ENST00000556831 CABP5Q9NP86 173 aa16.91■□□□□ 0.3
SLIRP-207ENST00000556831 DCP1AQ9NPI6 582 aaPredicted RBP16.91■□□□□ 0.3
SLIRP-207ENST00000556831 STAP2Q9UGK3 403 aa16.91■□□□□ 0.3
SLIRP-207ENST00000556831 SALL3Q9BXA9 1300 aa16.91■□□□□ 0.3
SLIRP-207ENST00000556831 GDF11O95390 407 aa16.9■□□□□ 0.3
SLIRP-207ENST00000556831 APPP05067 770 aa16.9■□□□□ 0.3
SLIRP-207ENST00000556831 CYP2D6P10635 497 aa16.9■□□□□ 0.3
SLIRP-207ENST00000556831 NOM1Q5C9Z4 860 aaKnown RBP16.9■□□□□ 0.3
SLIRP-207ENST00000556831 ANKRD23Q86SG2 305 aa16.9■□□□□ 0.3
SLIRP-207ENST00000556831 ZNF280CQ8ND82 737 aa16.9■□□□□ 0.3
SLIRP-207ENST00000556831 BAZ2AQ9UIF9 1905 aaKnown RBP16.9■□□□□ 0.3
SLIRP-207ENST00000556831 ECM2O94769 699 aaPredicted RBP16.89■□□□□ 0.29
SLIRP-207ENST00000556831 PLCD1P51178 756 aa16.89■□□□□ 0.29
SLIRP-207ENST00000556831 CERKLQ49MI3 558 aaPredicted RBP16.89■□□□□ 0.29
SLIRP-207ENST00000556831 GPAT2Q6NUI2 795 aa16.89■□□□□ 0.29
SLIRP-207ENST00000556831 METTL16Q86W50 562 aaKnown RBP16.89■□□□□ 0.29
SLIRP-207ENST00000556831 PARK7Q99497 189 aaKnown RBP16.89■□□□□ 0.29
SLIRP-207ENST00000556831 NACAP1Q9BZK3 213 aa16.89■□□□□ 0.29
SLIRP-207ENST00000556831 ARPP21Q9UBL0 812 aaPredicted RBP16.89■□□□□ 0.29
SLIRP-207ENST00000556831 SWAP70Q9UH65 585 aa16.89■□□□□ 0.29
SLIRP-207ENST00000556831 TAOK2Q9UL54 1235 aa16.89■□□□□ 0.29
SLIRP-207ENST00000556831 ZBTB21Q9ULJ3 1066 aa16.89■□□□□ 0.29
SLIRP-207ENST00000556831 AFG3L2Q9Y4W6 797 aa16.89■□□□□ 0.29
SLIRP-207ENST00000556831 A0A0G2JLL6 359 aaPredicted RBP16.88■□□□□ 0.29
SLIRP-207ENST00000556831 PDHXO00330 501 aa16.88■□□□□ 0.29
SLIRP-207ENST00000556831 MPHOSPH10O00566 681 aaKnown RBP16.88■□□□□ 0.29
SLIRP-207ENST00000556831 GPAA1O43292 621 aa16.88■□□□□ 0.29
SLIRP-207ENST00000556831 TDO2P48775 406 aa16.88■□□□□ 0.29
SLIRP-207ENST00000556831 PABPC4Q13310 644 aaKnown RBP eCLIP16.88■□□□□ 0.295e-8■□□□□ 8
SLIRP-207ENST00000556831 ARHGEF6Q15052 776 aa16.88■□□□□ 0.29
SLIRP-207ENST00000556831 PRRT2Q7Z6L0 340 aaPredicted RBP16.88■□□□□ 0.29
SLIRP-207ENST00000556831 CTU1Q7Z7A3 348 aaKnown RBP16.88■□□□□ 0.29
SLIRP-207ENST00000556831 RILPL2Q969X0 211 aa16.88■□□□□ 0.29
SLIRP-207ENST00000556831 ERO1AQ96HE7 468 aa16.88■□□□□ 0.29
SLIRP-207ENST00000556831 FEZ1Q99689 392 aa16.88■□□□□ 0.29
SLIRP-207ENST00000556831 TMOD4Q9NZQ9 345 aa16.88■□□□□ 0.29
SLIRP-207ENST00000556831 NEFLP07196 543 aa16.87■□□□□ 0.29
SLIRP-207ENST00000556831 SPP2Q13103 211 aa16.87■□□□□ 0.29
SLIRP-207ENST00000556831 KIF22Q14807 665 aa16.87■□□□□ 0.29
SLIRP-207ENST00000556831 RAB3GAP1Q15042 981 aa16.87■□□□□ 0.29
SLIRP-207ENST00000556831 ABCB5Q2M3G0 1257 aa16.87■□□□□ 0.29
SLIRP-207ENST00000556831 CD99L2Q8TCZ2 262 aa16.87■□□□□ 0.29
SLIRP-207ENST00000556831 OSBP2Q969R2 916 aa16.87■□□□□ 0.29
SLIRP-207ENST00000556831 STRBPQ96SI9 672 aaKnown RBP16.87■□□□□ 0.29
SLIRP-207ENST00000556831 PNMA3Q9UL41 463 aa16.87■□□□□ 0.29
SLIRP-207ENST00000556831 CENPFP49454 3210 aa16.87■□□□□ 0.29
SLIRP-207ENST00000556831 SZT2Q5T011 3432 aa16.86■□□□□ 0.29
SLIRP-207ENST00000556831 CYP2D7A0A087X1C5 515 aa16.86■□□□□ 0.29
SLIRP-207ENST00000556831 GH2P01242 217 aa16.86■□□□□ 0.29
SLIRP-207ENST00000556831 CYP2C8P10632 490 aa16.86■□□□□ 0.29
SLIRP-207ENST00000556831 SP3Q02447 781 aa16.86■□□□□ 0.29
SLIRP-207ENST00000556831 TATDN1Q6P1N9 297 aa16.86■□□□□ 0.29
SLIRP-207ENST00000556831 GIMAP6Q6P9H5 292 aa16.86■□□□□ 0.29
SLIRP-207ENST00000556831 PROCA1Q8NCQ7 364 aaPredicted RBP16.86■□□□□ 0.29
SLIRP-207ENST00000556831 SMCR8Q8TEV9 937 aaPredicted RBP16.86■□□□□ 0.29
SLIRP-207ENST00000556831 ARHGAP39Q9C0H5 1083 aa16.86■□□□□ 0.29
SLIRP-207ENST00000556831 ADGRA2Q96PE1 1338 aa16.86■□□□□ 0.29
SLIRP-207ENST00000556831 LOC285556D6RIA3 1793 aa16.86■□□□□ 0.29
SLIRP-207ENST00000556831 MYH8P13535 1937 aa16.86■□□□□ 0.29
SLIRP-207ENST00000556831 USP17L12C9JPN9 530 aa16.85■□□□□ 0.29
SLIRP-207ENST00000556831 USP17L21D6R901 530 aa16.85■□□□□ 0.29
SLIRP-207ENST00000556831 M0R2C6 588 aa16.85■□□□□ 0.29
SLIRP-207ENST00000556831 TLR2O60603 784 aa16.85■□□□□ 0.29
SLIRP-207ENST00000556831 CTGFP29279 349 aa16.85■□□□□ 0.29
SLIRP-207ENST00000556831 HMGCS2P54868 508 aa16.85■□□□□ 0.29
SLIRP-207ENST00000556831 ZMYM1Q5SVZ6 1142 aa16.85■□□□□ 0.29
SLIRP-207ENST00000556831 TREML2Q5T2D2 321 aa16.85■□□□□ 0.29
SLIRP-207ENST00000556831 TICAM2Q86XR7 235 aa16.85■□□□□ 0.29
SLIRP-207ENST00000556831 SLC44A5Q8NCS7 719 aa16.85■□□□□ 0.29
SLIRP-207ENST00000556831 WDR18Q9BV38 432 aa16.85■□□□□ 0.29
SLIRP-207ENST00000556831 ZNF287Q9HBT7 754 aa16.85■□□□□ 0.29
SLIRP-207ENST00000556831 AGTPBP1Q9UPW5 1226 aa16.85■□□□□ 0.29
SLIRP-207ENST00000556831 MINDY4BA8MYZ0 360 aa16.84■□□□□ 0.29
SLIRP-207ENST00000556831 USP17L10C9JJH3 530 aa16.84■□□□□ 0.29
SLIRP-207ENST00000556831 SLC3A2P08195 630 aaKnown RBP16.84■□□□□ 0.29
SLIRP-207ENST00000556831 SHMT1P34896 483 aa16.84■□□□□ 0.29
SLIRP-207ENST00000556831 MTMR2Q13614 643 aa16.84■□□□□ 0.29
SLIRP-207ENST00000556831 PKN2Q16513 984 aaKnown RBP16.84■□□□□ 0.29
SLIRP-207ENST00000556831 C12orf60Q5U649 245 aa16.84■□□□□ 0.29
SLIRP-207ENST00000556831 PLEKHM2Q8IWE5 1019 aa16.84■□□□□ 0.29
SLIRP-207ENST00000556831 DYNLL2Q96FJ2 89 aa16.84■□□□□ 0.29
SLIRP-207ENST00000556831 SEC62Q99442 399 aaKnown RBP16.84■□□□□ 0.29
SLIRP-207ENST00000556831 NAPBQ9H115 298 aa16.84■□□□□ 0.29
SLIRP-207ENST00000556831 CPA4Q9UI42 421 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms