RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 RUFY2Q8WXA3 655 aa20.87■□□□□ 0.93
SHMT2-225ENST00000556798 GREB1LQ9C091 1923 aaPredicted RBP20.86■□□□□ 0.93
SHMT2-225ENST00000556798 IRF6O14896 467 aa20.86■□□□□ 0.93
SHMT2-225ENST00000556798 MAP2K2P36507 400 aa20.86■□□□□ 0.93
SHMT2-225ENST00000556798 CDK8P49336 464 aa20.86■□□□□ 0.93
SHMT2-225ENST00000556798 CERKLQ49MI3 558 aaPredicted RBP20.86■□□□□ 0.93
SHMT2-225ENST00000556798 C16orf86Q6ZW13 317 aa20.86■□□□□ 0.93
SHMT2-225ENST00000556798 JMYQ8N9B5 988 aa20.86■□□□□ 0.93
SHMT2-225ENST00000556798 SWAP70Q9UH65 585 aa20.86■□□□□ 0.93
SHMT2-225ENST00000556798 ZBTB21Q9ULJ3 1066 aa20.86■□□□□ 0.93
SHMT2-225ENST00000556798 GH2P01242 217 aa20.85■□□□□ 0.93
SHMT2-225ENST00000556798 FGAP02671 866 aa20.85■□□□□ 0.93
SHMT2-225ENST00000556798 PPATQ06203 517 aa20.85■□□□□ 0.93
SHMT2-225ENST00000556798 PPARAQ07869 468 aa20.85■□□□□ 0.93
SHMT2-225ENST00000556798 PPIL2Q13356 520 aa20.85■□□□□ 0.93
SHMT2-225ENST00000556798 ALX1Q15699 326 aa20.85■□□□□ 0.93
SHMT2-225ENST00000556798 ZHX2Q9Y6X8 837 aa20.85■□□□□ 0.93
SHMT2-225ENST00000556798 SGSM2O43147 1006 aa20.84■□□□□ 0.93
SHMT2-225ENST00000556798 ABCB5Q2M3G0 1257 aa20.84■□□□□ 0.93
SHMT2-225ENST00000556798 ZMYM6O95789 1325 aa20.83■□□□□ 0.93
SHMT2-225ENST00000556798 LOC285556D6RIA3 1793 aa20.83■□□□□ 0.93
SHMT2-225ENST00000556798 MPHOSPH10O00566 681 aaKnown RBP20.83■□□□□ 0.93
SHMT2-225ENST00000556798 CDC45O75419 566 aa20.83■□□□□ 0.93
SHMT2-225ENST00000556798 ASNSP08243 561 aa20.83■□□□□ 0.93
SHMT2-225ENST00000556798 AKR1B1P15121 316 aa20.83■□□□□ 0.93
SHMT2-225ENST00000556798 HAND2P61296 217 aa20.83■□□□□ 0.93
SHMT2-225ENST00000556798 CTDSPL2Q05D32 466 aa20.83■□□□□ 0.93
SHMT2-225ENST00000556798 MYH4Q9Y623 1939 aa20.82■□□□□ 0.92
SHMT2-225ENST00000556798 MANSC4A6NHS7 340 aaPredicted RBP20.82■□□□□ 0.92
SHMT2-225ENST00000556798 TRIM75PA6NK02 468 aa20.82■□□□□ 0.92
SHMT2-225ENST00000556798 PRDM1O75626 825 aa20.82■□□□□ 0.92
SHMT2-225ENST00000556798 MS4A4AQ96JQ5 239 aa20.82■□□□□ 0.92
SHMT2-225ENST00000556798 ESYT1Q9BSJ8 1104 aa20.82■□□□□ 0.92
SHMT2-225ENST00000556798 DSCC1Q9BVC3 393 aa20.82■□□□□ 0.92
SHMT2-225ENST00000556798 USP17L5A8MUK1 530 aa20.81■□□□□ 0.92
SHMT2-225ENST00000556798 GTF2A2P52657 109 aa20.81■□□□□ 0.92
SHMT2-225ENST00000556798 PTH1RQ03431 593 aa20.81■□□□□ 0.92
SHMT2-225ENST00000556798 RAB3GAP1Q15042 981 aa20.81■□□□□ 0.92
SHMT2-225ENST00000556798 MKNK2Q9HBH9 465 aa20.81■□□□□ 0.92
SHMT2-225ENST00000556798 CABP5Q9NP86 173 aa20.81■□□□□ 0.92
SHMT2-225ENST00000556798 TAOK2Q9UL54 1235 aa20.81■□□□□ 0.92
SHMT2-225ENST00000556798 KCNH4Q9UQ05 1017 aa20.81■□□□□ 0.92
SHMT2-225ENST00000556798 AFG3L2Q9Y4W6 797 aa20.81■□□□□ 0.92
SHMT2-225ENST00000556798 CCL15-CCL14A0A0B4J2E2 113 aa20.8■□□□□ 0.92
SHMT2-225ENST00000556798 SLC3A2P08195 630 aaKnown RBP20.8■□□□□ 0.92
SHMT2-225ENST00000556798 RASA1P20936 1047 aa20.8■□□□□ 0.92
SHMT2-225ENST00000556798 GUCY1A2P33402 732 aa20.8■□□□□ 0.92
SHMT2-225ENST00000556798 SREBF2Q12772 1141 aa20.8■□□□□ 0.92
SHMT2-225ENST00000556798 SNAPC2Q13487 334 aa20.8■□□□□ 0.92
SHMT2-225ENST00000556798 SEPT2Q15019 361 aa20.8■□□□□ 0.92
SHMT2-225ENST00000556798 CCL15Q16663 113 aa20.8■□□□□ 0.92
SHMT2-225ENST00000556798 BRI3BPQ8WY22 251 aa20.8■□□□□ 0.92
SHMT2-225ENST00000556798 INCENPQ9NQS7 918 aa20.8■□□□□ 0.92
SHMT2-225ENST00000556798 GINM1Q9NU53 330 aa20.8■□□□□ 0.92
SHMT2-225ENST00000556798 TACC3Q9Y6A5 838 aa20.8■□□□□ 0.92
SHMT2-225ENST00000556798 MAP2K1Q02750 393 aaPredicted RBP20.79■□□□□ 0.92
SHMT2-225ENST00000556798 SPP2Q13103 211 aa20.79■□□□□ 0.92
SHMT2-225ENST00000556798 CASC1Q6TDU7 716 aa20.79■□□□□ 0.92
SHMT2-225ENST00000556798 CLEC10AQ8IUN9 316 aa20.79■□□□□ 0.92
SHMT2-225ENST00000556798 ZNF280CQ8ND82 737 aa20.79■□□□□ 0.92
SHMT2-225ENST00000556798 NBPF3Q9H094 633 aa20.79■□□□□ 0.92
SHMT2-225ENST00000556798 WBP1LQ9NX94 342 aa20.79■□□□□ 0.92
SHMT2-225ENST00000556798 ANAPC4Q9UJX5 808 aa20.79■□□□□ 0.92
SHMT2-225ENST00000556798 GTF3C3Q9Y5Q9 886 aa20.79■□□□□ 0.92
SHMT2-225ENST00000556798 IGF2BP3O00425 579 aaKnown RBP eCLIP20.78■□□□□ 0.92
SHMT2-225ENST00000556798 HSPA1AP0DMV8 641 aaKnown RBP20.78■□□□□ 0.92
SHMT2-225ENST00000556798 HSPA1BP0DMV9 641 aaKnown RBP20.78■□□□□ 0.92
SHMT2-225ENST00000556798 TM4SF4P48230 202 aa20.78■□□□□ 0.92
SHMT2-225ENST00000556798 PDE4BQ07343 736 aa20.78■□□□□ 0.92
SHMT2-225ENST00000556798 DGKZQ13574 1117 aa20.78■□□□□ 0.92
SHMT2-225ENST00000556798 TBC1D10CQ8IV04 446 aa20.78■□□□□ 0.92
SHMT2-225ENST00000556798 PTPN18Q99952 460 aa20.78■□□□□ 0.92
SHMT2-225ENST00000556798 AS3MTQ9HBK9 375 aa20.78■□□□□ 0.92
SHMT2-225ENST00000556798 TESPA1A2RU30 521 aaPredicted RBP20.77■□□□□ 0.92
SHMT2-225ENST00000556798 CXCL11O14625 94 aa20.77■□□□□ 0.92
SHMT2-225ENST00000556798 CETPP11597 493 aa20.77■□□□□ 0.92
SHMT2-225ENST00000556798 MTMR2Q13614 643 aa20.77■□□□□ 0.92
SHMT2-225ENST00000556798 TMEM179Q6ZVK1 233 aa20.77■□□□□ 0.92
SHMT2-225ENST00000556798 IFNL1Q8IU54 200 aa20.77■□□□□ 0.92
SHMT2-225ENST00000556798 REM2Q8IYK8 340 aaPredicted RBP20.77■□□□□ 0.92
SHMT2-225ENST00000556798 CCDC17Q96LX7 622 aa20.77■□□□□ 0.92
SHMT2-225ENST00000556798 WDR18Q9BV38 432 aa20.77■□□□□ 0.92
SHMT2-225ENST00000556798 ZNF287Q9HBT7 754 aa20.77■□□□□ 0.92
SHMT2-225ENST00000556798 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.77■□□□□ 0.92
SHMT2-225ENST00000556798 A0A0G2JLL6 359 aaPredicted RBP20.76■□□□□ 0.91
SHMT2-225ENST00000556798 ZNF213O14771 459 aa20.76■□□□□ 0.91
SHMT2-225ENST00000556798 MOGSQ13724 837 aa20.76■□□□□ 0.91
SHMT2-225ENST00000556798 FAM47AQ5JRC9 791 aa20.76■□□□□ 0.91
SHMT2-225ENST00000556798 RRP12Q5JTH9 1297 aaKnown RBP20.76■□□□□ 0.91
SHMT2-225ENST00000556798 KIAA1211Q6ZU35 1233 aa20.76■□□□□ 0.91
SHMT2-225ENST00000556798 PRRT2Q7Z6L0 340 aaPredicted RBP20.76■□□□□ 0.91
SHMT2-225ENST00000556798 ZNF444Q8N0Y2 327 aaPredicted RBP20.76■□□□□ 0.91
SHMT2-225ENST00000556798 ACER1Q8TDN7 264 aa20.76■□□□□ 0.91
SHMT2-225ENST00000556798 BEGAINQ9BUH8 593 aa20.76■□□□□ 0.91
SHMT2-225ENST00000556798 TBC1D2Q9BYX2 928 aa20.76■□□□□ 0.91
SHMT2-225ENST00000556798 LSG1Q9H089 658 aaKnown RBP20.76■□□□□ 0.91
SHMT2-225ENST00000556798 ANO2Q9NQ90 1003 aa20.76■□□□□ 0.91
SHMT2-225ENST00000556798 TOMM22Q9NS69 142 aa20.76■□□□□ 0.91
SHMT2-225ENST00000556798 CTNNA3Q9UI47 895 aa20.76■□□□□ 0.91
SHMT2-225ENST00000556798 TSKSQ9UJT2 592 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms