RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 OSBP2Q969R2 916 aa11.65□□□□□ -0.54
SRP54-210ENST00000556380 SLC10A4Q96EP9 437 aa11.65□□□□□ -0.54
SRP54-210ENST00000556380 DHX36Q9H2U1 1008 aaKnown RBP11.65□□□□□ -0.54
SRP54-210ENST00000556380 ARMT1Q9H993 441 aa11.65□□□□□ -0.54
SRP54-210ENST00000556380 PRKAB2O43741 272 aa11.64□□□□□ -0.55
SRP54-210ENST00000556380 MBD4O95243 580 aa11.64□□□□□ -0.55
SRP54-210ENST00000556380 CENPBP07199 599 aaPredicted RBP11.64□□□□□ -0.55
SRP54-210ENST00000556380 ZFYP08048 801 aaPredicted RBP11.64□□□□□ -0.55
SRP54-210ENST00000556380 INPP5BP32019 993 aa11.64□□□□□ -0.55
SRP54-210ENST00000556380 RRP1BQ14684 758 aaKnown RBP11.64□□□□□ -0.55
SRP54-210ENST00000556380 TICAM2Q86XR7 235 aa11.64□□□□□ -0.55
SRP54-210ENST00000556380 ZSCAN29Q8IWY8 852 aaPredicted RBP11.64□□□□□ -0.55
SRP54-210ENST00000556380 PTCD2Q8WV60 388 aaKnown RBP11.64□□□□□ -0.55
SRP54-210ENST00000556380 APPBP2Q92624 585 aa11.64□□□□□ -0.55
SRP54-210ENST00000556380 EVI5LQ96CN4 794 aa11.64□□□□□ -0.55
SRP54-210ENST00000556380 WNK4Q96J92 1243 aa11.64□□□□□ -0.55
SRP54-210ENST00000556380 WRNIP1Q96S55 665 aa11.64□□□□□ -0.55
SRP54-210ENST00000556380 STRBPQ96SI9 672 aaKnown RBP11.64□□□□□ -0.55
SRP54-210ENST00000556380 CRNKL1Q9BZJ0 848 aaKnown RBP11.64□□□□□ -0.55
SRP54-210ENST00000556380 PI4KBQ9UBF8 816 aa11.64□□□□□ -0.55
SRP54-210ENST00000556380 PALD1Q9ULE6 856 aa11.64□□□□□ -0.55
SRP54-210ENST00000556380 SNCAIPQ9Y6H5 919 aa11.64□□□□□ -0.55
SRP54-210ENST00000556380 THSD7BQ9C0I4 1608 aa11.64□□□□□ -0.55
SRP54-210ENST00000556380 USP5P45974 858 aa11.63□□□□□ -0.55
SRP54-210ENST00000556380 ZMYM1Q5SVZ6 1142 aa11.63□□□□□ -0.55
SRP54-210ENST00000556380 NOL9Q5SY16 702 aaKnown RBP11.63□□□□□ -0.55
SRP54-210ENST00000556380 FOXP4Q8IVH2 680 aaPredicted RBP11.63□□□□□ -0.55
SRP54-210ENST00000556380 SDR42E1Q8WUS8 393 aa11.63□□□□□ -0.55
SRP54-210ENST00000556380 ELP3Q9H9T3 547 aa11.63□□□□□ -0.55
SRP54-210ENST00000556380 DCP1AQ9NPI6 582 aaPredicted RBP11.63□□□□□ -0.55
SRP54-210ENST00000556380 SAP30BPQ9UHR5 308 aaKnown RBP11.63□□□□□ -0.55
SRP54-210ENST00000556380 SPDYE5A6NIY4 337 aa11.62□□□□□ -0.55
SRP54-210ENST00000556380 FAM196BA6NMK8 535 aa11.62□□□□□ -0.55
SRP54-210ENST00000556380 M0R2C6 588 aa11.62□□□□□ -0.55
SRP54-210ENST00000556380 ZBTB48P10074 688 aaPredicted RBP11.62□□□□□ -0.55
SRP54-210ENST00000556380 TM4SF4P48230 202 aa11.62□□□□□ -0.55
SRP54-210ENST00000556380 PLCD1P51178 756 aa11.62□□□□□ -0.55
SRP54-210ENST00000556380 MAP2K1Q02750 393 aaPredicted RBP11.62□□□□□ -0.55
SRP54-210ENST00000556380 SEC62Q99442 399 aaKnown RBP11.62□□□□□ -0.55
SRP54-210ENST00000556380 FSD1Q9BTV5 496 aa11.62□□□□□ -0.55
SRP54-210ENST00000556380 DNAJC18Q9H819 358 aa11.62□□□□□ -0.55
SRP54-210ENST00000556380 ATP8A2Q9NTI2 1148 aa11.62□□□□□ -0.55
SRP54-210ENST00000556380 HERC5Q9UII4 1024 aaKnown RBP11.62□□□□□ -0.55
SRP54-210ENST00000556380 CSADQ9Y600 493 aa11.62□□□□□ -0.55
SRP54-210ENST00000556380 TESPA1A2RU30 521 aaPredicted RBP11.61□□□□□ -0.55
SRP54-210ENST00000556380 GTPBP6O43824 516 aaPredicted RBP11.61□□□□□ -0.55
SRP54-210ENST00000556380 CTNND1O60716 968 aaKnown RBP11.61□□□□□ -0.55
SRP54-210ENST00000556380 HSPA1AP0DMV8 641 aaKnown RBP11.61□□□□□ -0.55
SRP54-210ENST00000556380 HSPA1BP0DMV9 641 aaKnown RBP11.61□□□□□ -0.55
SRP54-210ENST00000556380 GABPAQ06546 454 aa11.61□□□□□ -0.55
SRP54-210ENST00000556380 LRRFIP1Q32MZ4 808 aaKnown RBP11.61□□□□□ -0.55
SRP54-210ENST00000556380 CENPQQ7L2Z9 268 aaPredicted RBP11.61□□□□□ -0.55
SRP54-210ENST00000556380 ERO1BQ86YB8 467 aa11.61□□□□□ -0.55
SRP54-210ENST00000556380 AIDAQ96BJ3 306 aa11.61□□□□□ -0.55
SRP54-210ENST00000556380 OPTNQ96CV9 577 aa11.61□□□□□ -0.55
SRP54-210ENST00000556380 EHD4Q9H223 541 aa11.61□□□□□ -0.55
SRP54-210ENST00000556380 CDK5RAP2Q96SN8 1893 aa11.6□□□□□ -0.55
SRP54-210ENST00000556380 GSG1L2A8MUP6 293 aa11.6□□□□□ -0.55
SRP54-210ENST00000556380 FOXP2O15409 715 aa11.6□□□□□ -0.55
SRP54-210ENST00000556380 GPAA1O43292 621 aa11.6□□□□□ -0.55
SRP54-210ENST00000556380 CYP2D6P10635 497 aa11.6□□□□□ -0.55
SRP54-210ENST00000556380 JAG1P78504 1218 aa11.6□□□□□ -0.55
SRP54-210ENST00000556380 PPATQ06203 517 aa11.6□□□□□ -0.55
SRP54-210ENST00000556380 PPIL2Q13356 520 aa11.6□□□□□ -0.55
SRP54-210ENST00000556380 TATDN1Q6P1N9 297 aa11.6□□□□□ -0.55
SRP54-210ENST00000556380 TTC6Q86TZ1 520 aa11.6□□□□□ -0.55
SRP54-210ENST00000556380 SCYL3Q8IZE3 742 aa11.6□□□□□ -0.55
SRP54-210ENST00000556380 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.6□□□□□ -0.55
SRP54-210ENST00000556380 SLC4A4Q9Y6R1 1079 aa11.6□□□□□ -0.55
SRP54-210ENST00000556380 FOCADQ5VW36 1801 aa11.6□□□□□ -0.55
SRP54-210ENST00000556380 MANSC4A6NHS7 340 aaPredicted RBP11.59□□□□□ -0.55
SRP54-210ENST00000556380 TRIM6-TRIM34B2RNG4 842 aa11.59□□□□□ -0.55
SRP54-210ENST00000556380 SMIM22K7EJ46 135 aa11.59□□□□□ -0.55
SRP54-210ENST00000556380 IRF6O14896 467 aa11.59□□□□□ -0.55
SRP54-210ENST00000556380 FOXN1O15353 648 aa11.59□□□□□ -0.55
SRP54-210ENST00000556380 HLA-DOAP06340 250 aa11.59□□□□□ -0.55
SRP54-210ENST00000556380 GSPT1P15170 499 aaKnown RBP11.59□□□□□ -0.55
SRP54-210ENST00000556380 PTPRAP18433 802 aa11.59□□□□□ -0.55
SRP54-210ENST00000556380 CAP2P40123 477 aa11.59□□□□□ -0.55
SRP54-210ENST00000556380 INHBEP58166 350 aa11.59□□□□□ -0.55
SRP54-210ENST00000556380 SLC4A8Q2Y0W8 1093 aa11.59□□□□□ -0.55
SRP54-210ENST00000556380 TTC22Q5TAA0 569 aa11.59□□□□□ -0.55
SRP54-210ENST00000556380 C12orf60Q5U649 245 aa11.59□□□□□ -0.55
SRP54-210ENST00000556380 ERICH6BQ5W0A0 696 aa11.59□□□□□ -0.55
SRP54-210ENST00000556380 GIMAP6Q6P9H5 292 aa11.59□□□□□ -0.55
SRP54-210ENST00000556380 PTPN18Q99952 460 aa11.59□□□□□ -0.55
SRP54-210ENST00000556380 RNF186Q9NXI6 227 aa11.59□□□□□ -0.55
SRP54-210ENST00000556380 MCM9Q9NXL9 1143 aa11.59□□□□□ -0.55
SRP54-210ENST00000556380 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.59□□□□□ -0.55
SRP54-210ENST00000556380 SERPINB13Q9UIV8 391 aa11.59□□□□□ -0.55
SRP54-210ENST00000556380 KCNH4Q9UQ05 1017 aa11.59□□□□□ -0.55
SRP54-210ENST00000556380 OTOFQ9HC10 1997 aa11.59□□□□□ -0.55
SRP54-210ENST00000556380 MYH7P12883 1935 aa11.58□□□□□ -0.55
SRP54-210ENST00000556380 AK9Q5TCS8 1911 aa11.58□□□□□ -0.55
SRP54-210ENST00000556380 SIPA1L1O43166 1804 aa11.58□□□□□ -0.56
SRP54-210ENST00000556380 CYP2D7A0A087X1C5 515 aa11.58□□□□□ -0.56
SRP54-210ENST00000556380 A0A0D9SFI3 127 aa11.58□□□□□ -0.56
SRP54-210ENST00000556380 PATL2C9JE40 543 aaKnown RBP11.58□□□□□ -0.56
SRP54-210ENST00000556380 USP17L12C9JPN9 530 aa11.58□□□□□ -0.56
SRP54-210ENST00000556380 USP17L21D6R901 530 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms