RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 HMG20BQ9P0W2 317 aa8.24□□□□□ -1.09
PSEN1-216ENST00000556066 PTPN22Q9Y2R2 807 aa8.24□□□□□ -1.09
PSEN1-216ENST00000556066 CENPFP49454 3210 aa8.24□□□□□ -1.09
PSEN1-216ENST00000556066 MROH7-TTC4A0A0A0MT08 1334 aa8.24□□□□□ -1.09
PSEN1-216ENST00000556066 GAKO14976 1311 aa8.24□□□□□ -1.09
PSEN1-216ENST00000556066 DOCK1Q14185 1865 aa8.23□□□□□ -1.09
PSEN1-216ENST00000556066 PTPRFP10586 1907 aa8.23□□□□□ -1.09
PSEN1-216ENST00000556066 ENTPD3O75355 529 aa8.23□□□□□ -1.09
PSEN1-216ENST00000556066 FXR1P51114 621 aaKnown RBP eCLIP8.23□□□□□ -1.09
PSEN1-216ENST00000556066 CAP1Q01518 475 aa8.23□□□□□ -1.09
PSEN1-216ENST00000556066 KIF22Q14807 665 aa8.23□□□□□ -1.09
PSEN1-216ENST00000556066 THSD4Q6ZMP0 1018 aa8.23□□□□□ -1.09
PSEN1-216ENST00000556066 DDX12PQ92771 950 aa8.23□□□□□ -1.09
PSEN1-216ENST00000556066 PICK1Q9NRD5 415 aa8.23□□□□□ -1.09
PSEN1-216ENST00000556066 LRP2BPQ9P2M1 347 aa8.23□□□□□ -1.09
PSEN1-216ENST00000556066 ZNF112Q9UJU3 913 aa8.23□□□□□ -1.09
PSEN1-216ENST00000556066 ATAD5Q96QE3 1844 aa8.23□□□□□ -1.09
PSEN1-216ENST00000556066 PDS5AQ29RF7 1337 aaKnown RBP8.23□□□□□ -1.09
PSEN1-216ENST00000556066 MGAMO43451 1857 aa8.22□□□□□ -1.09
PSEN1-216ENST00000556066 CDK5RAP2Q96SN8 1893 aa8.22□□□□□ -1.09
PSEN1-216ENST00000556066 DDTLA6NHG4 134 aaPredicted RBP8.22□□□□□ -1.09
PSEN1-216ENST00000556066 PDHXO00330 501 aa8.22□□□□□ -1.09
PSEN1-216ENST00000556066 TLR2O60603 784 aa8.22□□□□□ -1.09
PSEN1-216ENST00000556066 SURF6O75683 361 aaKnown RBP8.22□□□□□ -1.09
PSEN1-216ENST00000556066 MYCP01106 439 aaPredicted RBP8.22□□□□□ -1.09
PSEN1-216ENST00000556066 LDHCP07864 332 aa8.22□□□□□ -1.09
PSEN1-216ENST00000556066 UQCRFS1P1P0C7P4 283 aa8.22□□□□□ -1.09
PSEN1-216ENST00000556066 SLURP2P0DP57 97 aa8.22□□□□□ -1.09
PSEN1-216ENST00000556066 PTPREP23469 700 aa8.22□□□□□ -1.09
PSEN1-216ENST00000556066 MCAMP43121 646 aa8.22□□□□□ -1.09
PSEN1-216ENST00000556066 GSTO1P78417 241 aa8.22□□□□□ -1.09
PSEN1-216ENST00000556066 SLC9C1Q4G0N8 1177 aa8.22□□□□□ -1.09
PSEN1-216ENST00000556066 TTC39AQ5SRH9 613 aa8.22□□□□□ -1.09
PSEN1-216ENST00000556066 SH3BP5LQ7L8J4 393 aa8.22□□□□□ -1.09
PSEN1-216ENST00000556066 ZNF454Q8N9F8 522 aa8.22□□□□□ -1.09
PSEN1-216ENST00000556066 IDI2Q9BXS1 227 aa8.22□□□□□ -1.09
PSEN1-216ENST00000556066 ARHGAP39Q9C0H5 1083 aa8.22□□□□□ -1.09
PSEN1-216ENST00000556066 NBPF3Q9H094 633 aa8.22□□□□□ -1.09
PSEN1-216ENST00000556066 ZCCHC17Q9NP64 241 aaKnown RBP8.22□□□□□ -1.09
PSEN1-216ENST00000556066 DDX4Q9NQI0 724 aaKnown RBP8.22□□□□□ -1.09
PSEN1-216ENST00000556066 SNRKQ9NRH2 765 aa8.22□□□□□ -1.09
PSEN1-216ENST00000556066 CPA4Q9UI42 421 aa8.22□□□□□ -1.09
PSEN1-216ENST00000556066 PTCH2Q9Y6C5 1203 aa8.22□□□□□ -1.09
PSEN1-216ENST00000556066 ZHX2Q9Y6X8 837 aa8.22□□□□□ -1.09
PSEN1-216ENST00000556066 RBBP6Q7Z6E9 1792 aaKnown RBP8.22□□□□□ -1.09
PSEN1-216ENST00000556066 PHIPQ8WWQ0 1821 aa8.22□□□□□ -1.09
PSEN1-216ENST00000556066 MAST2Q6P0Q8 1798 aa8.21□□□□□ -1.1
PSEN1-216ENST00000556066 GPR75-ASB3A0A0A6YYF3 556 aa8.21□□□□□ -1.1
PSEN1-216ENST00000556066 FAM196BA6NMK8 535 aa8.21□□□□□ -1.1
PSEN1-216ENST00000556066 PHF20L1A8MW92 1017 aa8.21□□□□□ -1.1
PSEN1-216ENST00000556066 RLBP1P12271 317 aa8.21□□□□□ -1.1
PSEN1-216ENST00000556066 ARID4AP29374 1257 aaPredicted RBP8.21□□□□□ -1.1
PSEN1-216ENST00000556066 LACTBP83111 547 aaPredicted RBP8.21□□□□□ -1.1
PSEN1-216ENST00000556066 ATP8B2P98198 1209 aa8.21□□□□□ -1.1
PSEN1-216ENST00000556066 TNNI3KQ59H18 835 aa8.21□□□□□ -1.1
PSEN1-216ENST00000556066 CCDC158Q5M9N0 1113 aa8.21□□□□□ -1.1
PSEN1-216ENST00000556066 NOL9Q5SY16 702 aaKnown RBP8.21□□□□□ -1.1
PSEN1-216ENST00000556066 GADL1Q6ZQY3 521 aa8.21□□□□□ -1.1
PSEN1-216ENST00000556066 ANKRD23Q86SG2 305 aa8.21□□□□□ -1.1
PSEN1-216ENST00000556066 NBPF11Q86T75 865 aa8.21□□□□□ -1.1
PSEN1-216ENST00000556066 GPIHBP1Q8IV16 184 aa8.21□□□□□ -1.1
PSEN1-216ENST00000556066 SCYL3Q8IZE3 742 aa8.21□□□□□ -1.1
PSEN1-216ENST00000556066 SSH3Q8TE77 659 aa8.21□□□□□ -1.1
PSEN1-216ENST00000556066 ZNF384Q8TF68 577 aa8.21□□□□□ -1.1
PSEN1-216ENST00000556066 NSUN4Q96CB9 384 aaKnown RBP8.21□□□□□ -1.1
PSEN1-216ENST00000556066 DBNDD2Q9BQY9 259 aa8.21□□□□□ -1.1
PSEN1-216ENST00000556066 NOL10Q9BSC4 688 aaKnown RBP8.21□□□□□ -1.1
PSEN1-216ENST00000556066 KCNH4Q9UQ05 1017 aa8.21□□□□□ -1.1
PSEN1-216ENST00000556066 FPGT-TNNI3KV9GXZ4 949 aa8.21□□□□□ -1.1
PSEN1-216ENST00000556066 RFX7Q2KHR2 1363 aa8.21□□□□□ -1.1
PSEN1-216ENST00000556066 ATRNL1Q5VV63 1379 aa8.21□□□□□ -1.1
PSEN1-216ENST00000556066 BRCA2P51587 3418 aa8.2□□□□□ -1.1
PSEN1-216ENST00000556066 TRIM75PA6NK02 468 aa8.2□□□□□ -1.1
PSEN1-216ENST00000556066 CXCL11O14625 94 aa8.2□□□□□ -1.1
PSEN1-216ENST00000556066 CTNND1O60716 968 aaKnown RBP8.2□□□□□ -1.1
PSEN1-216ENST00000556066 ZMYND10O75800 440 aa8.2□□□□□ -1.1
PSEN1-216ENST00000556066 PTPRAP18433 802 aa8.2□□□□□ -1.1
PSEN1-216ENST00000556066 EN2P19622 333 aaPredicted RBP8.2□□□□□ -1.1
PSEN1-216ENST00000556066 RHBDL3P58872 404 aa8.2□□□□□ -1.1
PSEN1-216ENST00000556066 SLC4A8Q2Y0W8 1093 aa8.2□□□□□ -1.1
PSEN1-216ENST00000556066 NAA16Q6N069 864 aaPredicted RBP8.2□□□□□ -1.1
PSEN1-216ENST00000556066 CCDC84Q86UT8 332 aaPredicted RBP8.2□□□□□ -1.1
PSEN1-216ENST00000556066 TEX11Q8IYF3 940 aa8.2□□□□□ -1.1
PSEN1-216ENST00000556066 PANK1Q8TE04 598 aa8.2□□□□□ -1.1
PSEN1-216ENST00000556066 SH3TC2Q8TF17 1288 aa8.2□□□□□ -1.1
PSEN1-216ENST00000556066 ARMC5Q96C12 935 aa8.2□□□□□ -1.1
PSEN1-216ENST00000556066 BCL11AQ9H165 835 aa8.2□□□□□ -1.1
PSEN1-216ENST00000556066 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.2□□□□□ -1.1
PSEN1-216ENST00000556066 AATFQ9NY61 560 aaKnown RBP eCLIP8.2□□□□□ -1.1
PSEN1-216ENST00000556066 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.2□□□□□ -1.1
PSEN1-216ENST00000556066 FOCADQ5VW36 1801 aa8.19□□□□□ -1.1
PSEN1-216ENST00000556066 MYH1P12882 1939 aa8.19□□□□□ -1.1
PSEN1-216ENST00000556066 DOCK3Q8IZD9 2030 aa8.19□□□□□ -1.1
PSEN1-216ENST00000556066 ZBTB7BO15156 539 aaPredicted RBP8.19□□□□□ -1.1
PSEN1-216ENST00000556066 FMNL1O95466 1100 aaPredicted RBP8.19□□□□□ -1.1
PSEN1-216ENST00000556066 BAG3O95817 575 aa8.19□□□□□ -1.1
PSEN1-216ENST00000556066 CYP2C8P10632 490 aa8.19□□□□□ -1.1
PSEN1-216ENST00000556066 PSMC4P43686 418 aa8.19□□□□□ -1.1
PSEN1-216ENST00000556066 MOGSQ13724 837 aa8.19□□□□□ -1.1
PSEN1-216ENST00000556066 GPAT2Q6NUI2 795 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms