RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 TFRCP02786 760 aaKnown RBP17.64■□□□□ 0.41
CHMP4BP1-201ENST00000556017 DYNLL1P63167 89 aaKnown RBP17.64■□□□□ 0.41
CHMP4BP1-201ENST00000556017 MAP3K21Q5TCX8 1036 aa17.64■□□□□ 0.41
CHMP4BP1-201ENST00000556017 TRIB2Q92519 343 aa17.64■□□□□ 0.41
CHMP4BP1-201ENST00000556017 DHX36Q9H2U1 1008 aaKnown RBP17.64■□□□□ 0.41
CHMP4BP1-201ENST00000556017 C1orf115Q9H7X2 142 aa17.64■□□□□ 0.41
CHMP4BP1-201ENST00000556017 TAOK2Q9UL54 1235 aa17.64■□□□□ 0.41
CHMP4BP1-201ENST00000556017 DNAH12Q6ZR08 3092 aa17.64■□□□□ 0.41
CHMP4BP1-201ENST00000556017 FRMPD3Q5JV73 1810 aa17.63■□□□□ 0.41
CHMP4BP1-201ENST00000556017 SOX1O00570 391 aaPredicted RBP17.63■□□□□ 0.41
CHMP4BP1-201ENST00000556017 HMGCRP04035 888 aa17.63■□□□□ 0.41
CHMP4BP1-201ENST00000556017 Q3C1V9 767 aa17.63■□□□□ 0.41
CHMP4BP1-201ENST00000556017 TTC39AQ5SRH9 613 aa17.63■□□□□ 0.41
CHMP4BP1-201ENST00000556017 USP6NLQ92738 828 aa17.63■□□□□ 0.41
CHMP4BP1-201ENST00000556017 EAF2Q96CJ1 260 aaPredicted RBP17.63■□□□□ 0.41
CHMP4BP1-201ENST00000556017 RBPJLQ9UBG7 517 aa17.63■□□□□ 0.41
CHMP4BP1-201ENST00000556017 NR2E3Q9Y5X4 410 aa17.63■□□□□ 0.41
CHMP4BP1-201ENST00000556017 GDF11O95390 407 aa17.62■□□□□ 0.41
CHMP4BP1-201ENST00000556017 ASNSP08243 561 aa17.62■□□□□ 0.41
CHMP4BP1-201ENST00000556017 CAPN2P17655 700 aa17.62■□□□□ 0.41
CHMP4BP1-201ENST00000556017 PABPC4Q13310 644 aaKnown RBP eCLIP17.62■□□□□ 0.41
CHMP4BP1-201ENST00000556017 ZKSCAN2Q63HK3 967 aa17.62■□□□□ 0.41
CHMP4BP1-201ENST00000556017 FOXP4Q8IVH2 680 aaPredicted RBP17.62■□□□□ 0.41
CHMP4BP1-201ENST00000556017 AS3MTQ9HBK9 375 aa17.62■□□□□ 0.41
CHMP4BP1-201ENST00000556017 EMILIN3Q9NT22 766 aa17.62■□□□□ 0.41
CHMP4BP1-201ENST00000556017 ZBTB21Q9ULJ3 1066 aa17.62■□□□□ 0.41
CHMP4BP1-201ENST00000556017 SURF6O75683 361 aaKnown RBP17.61■□□□□ 0.41
CHMP4BP1-201ENST00000556017 BAG3O95817 575 aa17.61■□□□□ 0.41
CHMP4BP1-201ENST00000556017 HERVK_113P62684 666 aa17.61■□□□□ 0.41
CHMP4BP1-201ENST00000556017 SAP30BPQ9UHR5 308 aaKnown RBP17.61■□□□□ 0.41
CHMP4BP1-201ENST00000556017 NDUFB9Q9Y6M9 179 aa17.61■□□□□ 0.41
CHMP4BP1-201ENST00000556017 RPTORQ8N122 1335 aa17.61■□□□□ 0.41
CHMP4BP1-201ENST00000556017 EVI5O60447 810 aa17.6■□□□□ 0.41
CHMP4BP1-201ENST00000556017 PLCG2P16885 1265 aa17.6■□□□□ 0.41
CHMP4BP1-201ENST00000556017 CCDC158Q5M9N0 1113 aa17.6■□□□□ 0.41
CHMP4BP1-201ENST00000556017 TATDN1Q6P1N9 297 aa17.6■□□□□ 0.41
CHMP4BP1-201ENST00000556017 ANKLE1Q8NAG6 615 aa17.6■□□□□ 0.41
CHMP4BP1-201ENST00000556017 CCDC8Q9H0W5 538 aaPredicted RBP17.6■□□□□ 0.41
CHMP4BP1-201ENST00000556017 PORCNQ9H237 461 aa17.6■□□□□ 0.41
CHMP4BP1-201ENST00000556017 ANTXR1Q9H6X2 564 aa17.6■□□□□ 0.41
CHMP4BP1-201ENST00000556017 STAP2Q9UGK3 403 aa17.6■□□□□ 0.41
CHMP4BP1-201ENST00000556017 RLFQ13129 1914 aa17.59■□□□□ 0.41
CHMP4BP1-201ENST00000556017 C19orf81C9J6K1 198 aa17.59■□□□□ 0.41
CHMP4BP1-201ENST00000556017 USP17L10C9JJH3 530 aa17.59■□□□□ 0.41
CHMP4BP1-201ENST00000556017 NECAB2Q7Z6G3 386 aa17.59■□□□□ 0.41
CHMP4BP1-201ENST00000556017 GDF15Q99988 308 aa17.59■□□□□ 0.41
CHMP4BP1-201ENST00000556017 NOL10Q9BSC4 688 aaKnown RBP17.59■□□□□ 0.41
CHMP4BP1-201ENST00000556017 GINM1Q9NU53 330 aa17.59■□□□□ 0.41
CHMP4BP1-201ENST00000556017 OGDHLQ9ULD0 1010 aa17.59■□□□□ 0.41
CHMP4BP1-201ENST00000556017 PFASO15067 1338 aa17.58■□□□□ 0.4
CHMP4BP1-201ENST00000556017 A0A0C4DFX4 3053 aa17.58■□□□□ 0.4
CHMP4BP1-201ENST00000556017 A0A1W2PPC1 479 aa17.58■□□□□ 0.4
CHMP4BP1-201ENST00000556017 IGSF3O75054 1194 aa17.58■□□□□ 0.4
CHMP4BP1-201ENST00000556017 CNMDO75829 334 aa17.58■□□□□ 0.4
CHMP4BP1-201ENST00000556017 XRCC5P13010 732 aaKnown RBP17.58■□□□□ 0.4
CHMP4BP1-201ENST00000556017 CYP2B6P20813 491 aa17.58■□□□□ 0.4
CHMP4BP1-201ENST00000556017 IRX3P78415 501 aaPredicted RBP17.58■□□□□ 0.4
CHMP4BP1-201ENST00000556017 MORN1Q5T089 497 aa17.58■□□□□ 0.4
CHMP4BP1-201ENST00000556017 LRCH3Q96II8 777 aa17.58■□□□□ 0.4
CHMP4BP1-201ENST00000556017 C12orf42Q96LP6 360 aa17.58■□□□□ 0.4
CHMP4BP1-201ENST00000556017 HMX1Q9NP08 348 aaPredicted RBP17.58■□□□□ 0.4
CHMP4BP1-201ENST00000556017 LAMA2P24043 3122 aaKnown RBP17.58■□□□□ 0.4
CHMP4BP1-201ENST00000556017 NAV1Q8NEY1 1877 aa17.57■□□□□ 0.4
CHMP4BP1-201ENST00000556017 GH2P01242 217 aa17.57■□□□□ 0.4
CHMP4BP1-201ENST00000556017 CYP7A1P22680 504 aa17.57■□□□□ 0.4
CHMP4BP1-201ENST00000556017 ERVK-9P63128 1117 aa17.57■□□□□ 0.4
CHMP4BP1-201ENST00000556017 ERVK-24P63145 666 aa17.57■□□□□ 0.4
CHMP4BP1-201ENST00000556017 EVX2Q03828 476 aa17.57■□□□□ 0.4
CHMP4BP1-201ENST00000556017 CCL14Q16627 93 aa17.57■□□□□ 0.4
CHMP4BP1-201ENST00000556017 MIGA1Q8NAN2 632 aa17.57■□□□□ 0.4
CHMP4BP1-201ENST00000556017 GPRC5AQ8NFJ5 357 aa17.57■□□□□ 0.4
CHMP4BP1-201ENST00000556017 PRKAR2AP13861 404 aaKnown RBP17.56■□□□□ 0.4
CHMP4BP1-201ENST00000556017 CACNB2Q08289 660 aaPredicted RBP17.56■□□□□ 0.4
CHMP4BP1-201ENST00000556017 OS9Q13438 667 aaPredicted RBP17.56■□□□□ 0.4
CHMP4BP1-201ENST00000556017 LHX8Q68G74 356 aa17.56■□□□□ 0.4
CHMP4BP1-201ENST00000556017 CEP85Q6P2H3 762 aa17.56■□□□□ 0.4
CHMP4BP1-201ENST00000556017 CRACR2BQ8N4Y2 399 aaPredicted RBP17.56■□□□□ 0.4
CHMP4BP1-201ENST00000556017 RIOK1Q9BRS2 568 aaKnown RBP17.56■□□□□ 0.4
CHMP4BP1-201ENST00000556017 NBPF3Q9H094 633 aa17.56■□□□□ 0.4
CHMP4BP1-201ENST00000556017 TMOD4Q9NZQ9 345 aa17.56■□□□□ 0.4
CHMP4BP1-201ENST00000556017 IDH1O75874 414 aaKnown RBP17.55■□□□□ 0.4
CHMP4BP1-201ENST00000556017 COL6A1P12109 1028 aa17.55■□□□□ 0.4
CHMP4BP1-201ENST00000556017 GUCY1A2P33402 732 aa17.55■□□□□ 0.4
CHMP4BP1-201ENST00000556017 BMP8BP34820 402 aa17.55■□□□□ 0.4
CHMP4BP1-201ENST00000556017 GPR142Q7Z601 462 aa17.55■□□□□ 0.4
CHMP4BP1-201ENST00000556017 C7orf61Q8IZ16 206 aa17.55■□□□□ 0.4
CHMP4BP1-201ENST00000556017 MAGEB6Q8N7X4 407 aa17.55■□□□□ 0.4
CHMP4BP1-201ENST00000556017 ACER1Q8TDN7 264 aa17.55■□□□□ 0.4
CHMP4BP1-201ENST00000556017 NUDT12Q9BQG2 462 aa17.55■□□□□ 0.4
CHMP4BP1-201ENST00000556017 EHD4Q9H223 541 aa17.55■□□□□ 0.4
CHMP4BP1-201ENST00000556017 IGHA2P01877 340 aa17.54■□□□□ 0.4
CHMP4BP1-201ENST00000556017 CCND3P30281 292 aaPredicted RBP17.54■□□□□ 0.4
CHMP4BP1-201ENST00000556017 MAPK4P31152 587 aa17.54■□□□□ 0.4
CHMP4BP1-201ENST00000556017 SHMT1P34896 483 aa17.54■□□□□ 0.4
CHMP4BP1-201ENST00000556017 PLCD1P51178 756 aa17.54■□□□□ 0.4
CHMP4BP1-201ENST00000556017 USP17L2Q6R6M4 530 aa17.54■□□□□ 0.4
CHMP4BP1-201ENST00000556017 SOCS4Q8WXH5 440 aa17.54■□□□□ 0.4
CHMP4BP1-201ENST00000556017 ZMYND8Q9ULU4 1186 aaPredicted RBP17.54■□□□□ 0.4
CHMP4BP1-201ENST00000556017 A0A0G2JMZ2 1700 aa17.54■□□□□ 0.4
CHMP4BP1-201ENST00000556017 PARP14Q460N5 1801 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms