RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-208ENST00000556009 CEP85Q6P2H3 762 aa21.63■■□□□ 1.05
NPC2-208ENST00000556009 DPF3Q92784 378 aa21.63■■□□□ 1.05
NPC2-208ENST00000556009 HTATIP2Q9BUP3 242 aa21.63■■□□□ 1.05
NPC2-208ENST00000556009 MORF4L1Q9UBU8 362 aa21.63■■□□□ 1.05
NPC2-208ENST00000556009 CYP7A1P22680 504 aa21.62■■□□□ 1.05
NPC2-208ENST00000556009 ERC1Q8IUD2 1116 aa21.62■■□□□ 1.05
NPC2-208ENST00000556009 CRACR2BQ8N4Y2 399 aaPredicted RBP21.62■■□□□ 1.05
NPC2-208ENST00000556009 PAK6Q9NQU5 681 aaPredicted RBP21.62■■□□□ 1.05
NPC2-208ENST00000556009 HLA-DOAP06340 250 aa21.61■■□□□ 1.05
NPC2-208ENST00000556009 DYNLL1P63167 89 aaKnown RBP21.61■■□□□ 1.05
NPC2-208ENST00000556009 MTMR2Q13614 643 aa21.61■■□□□ 1.05
NPC2-208ENST00000556009 TRIM34Q9BYJ4 488 aa21.61■■□□□ 1.05
NPC2-208ENST00000556009 TMOD4Q9NZQ9 345 aa21.61■■□□□ 1.05
NPC2-208ENST00000556009 GJD2Q9UKL4 321 aa21.61■■□□□ 1.05
NPC2-208ENST00000556009 USP17L10C9JJH3 530 aa21.6■■□□□ 1.05
NPC2-208ENST00000556009 IDH1O75874 414 aaKnown RBP21.6■■□□□ 1.05
NPC2-208ENST00000556009 FARP2O94887 1054 aaPredicted RBP21.59■■□□□ 1.05
NPC2-208ENST00000556009 IRX3P78415 501 aaPredicted RBP21.59■■□□□ 1.05
NPC2-208ENST00000556009 TATDN1Q6P1N9 297 aa21.59■■□□□ 1.05
NPC2-208ENST00000556009 DEFB118Q96PH6 123 aa21.59■■□□□ 1.05
NPC2-208ENST00000556009 P2RX7Q99572 595 aaKnown RBP21.59■■□□□ 1.05
NPC2-208ENST00000556009 CRISPLD2Q9H0B8 497 aa21.59■■□□□ 1.05
NPC2-208ENST00000556009 SAP30BPQ9UHR5 308 aaKnown RBP21.59■■□□□ 1.05
NPC2-208ENST00000556009 ZBTB21Q9ULJ3 1066 aa21.59■■□□□ 1.05
NPC2-208ENST00000556009 ZBED9Q6R2W3 1325 aa21.58■■□□□ 1.05
NPC2-208ENST00000556009 TFRCP02786 760 aaKnown RBP21.58■■□□□ 1.05
NPC2-208ENST00000556009 MAP3K12Q12852 859 aa21.58■■□□□ 1.05
NPC2-208ENST00000556009 SHROOM1Q2M3G4 852 aaPredicted RBP21.58■■□□□ 1.05
NPC2-208ENST00000556009 HSP90AB4PQ58FF6 505 aa21.58■■□□□ 1.05
NPC2-208ENST00000556009 RANBP2P49792 3224 aaKnown RBP21.58■■□□□ 1.04
NPC2-208ENST00000556009 SZT2Q5T011 3432 aa21.58■■□□□ 1.04
NPC2-208ENST00000556009 DDX60LQ5H9U9 1706 aaKnown RBP21.58■■□□□ 1.04
NPC2-208ENST00000556009 GDF11O95390 407 aa21.57■■□□□ 1.04
NPC2-208ENST00000556009 MS4A1P11836 297 aa21.57■■□□□ 1.04
NPC2-208ENST00000556009 AACSQ86V21 672 aa21.57■■□□□ 1.04
NPC2-208ENST00000556009 MAGEB6Q8N7X4 407 aa21.57■■□□□ 1.04
NPC2-208ENST00000556009 EHD4Q9H223 541 aa21.57■■□□□ 1.04
NPC2-208ENST00000556009 ANTXR1Q9H6X2 564 aa21.57■■□□□ 1.04
NPC2-208ENST00000556009 TAOK2Q9UL54 1235 aa21.57■■□□□ 1.04
NPC2-208ENST00000556009 EXOC6BQ9Y2D4 811 aa21.57■■□□□ 1.04
NPC2-208ENST00000556009 NR2E3Q9Y5X4 410 aa21.57■■□□□ 1.04
NPC2-208ENST00000556009 HMGCRP04035 888 aa21.56■■□□□ 1.04
NPC2-208ENST00000556009 HERVK_113P62684 666 aa21.56■■□□□ 1.04
NPC2-208ENST00000556009 TTC6Q86TZ1 520 aa21.56■■□□□ 1.04
NPC2-208ENST00000556009 MIGA1Q8NAN2 632 aa21.56■■□□□ 1.04
NPC2-208ENST00000556009 GPRC5AQ8NFJ5 357 aa21.56■■□□□ 1.04
NPC2-208ENST00000556009 PANK1Q8TE04 598 aa21.56■■□□□ 1.04
NPC2-208ENST00000556009 GTF3C2Q8WUA4 911 aaPredicted RBP21.56■■□□□ 1.04
NPC2-208ENST00000556009 EMILIN3Q9NT22 766 aa21.56■■□□□ 1.04
NPC2-208ENST00000556009 NAV1Q8NEY1 1877 aa21.56■■□□□ 1.04
NPC2-208ENST00000556009 USP5P45974 858 aa21.55■■□□□ 1.04
NPC2-208ENST00000556009 USP17L2Q6R6M4 530 aa21.55■■□□□ 1.04
NPC2-208ENST00000556009 CHRDL2Q6WN34 429 aa21.55■■□□□ 1.04
NPC2-208ENST00000556009 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.55■■□□□ 1.04
NPC2-208ENST00000556009 RBPJLQ9UBG7 517 aa21.55■■□□□ 1.04
NPC2-208ENST00000556009 SERPINB13Q9UIV8 391 aa21.55■■□□□ 1.04
NPC2-208ENST00000556009 NDUFB9Q9Y6M9 179 aa21.55■■□□□ 1.04
NPC2-208ENST00000556009 GH2P01242 217 aa21.54■■□□□ 1.04
NPC2-208ENST00000556009 XRCC5P13010 732 aaKnown RBP21.54■■□□□ 1.04
NPC2-208ENST00000556009 TTF1Q15361 905 aaPredicted RBP21.54■■□□□ 1.04
NPC2-208ENST00000556009 RPAP2Q8IXW5 612 aaPredicted RBP21.54■■□□□ 1.04
NPC2-208ENST00000556009 RHPN1Q8TCX5 695 aa21.54■■□□□ 1.04
NPC2-208ENST00000556009 C12orf42Q96LP6 360 aa21.54■■□□□ 1.04
NPC2-208ENST00000556009 TXNRD2Q9NNW7 524 aa21.54■■□□□ 1.04
NPC2-208ENST00000556009 RPTORQ8N122 1335 aa21.54■■□□□ 1.04
NPC2-208ENST00000556009 FRMPD3Q5JV73 1810 aa21.53■■□□□ 1.04
NPC2-208ENST00000556009 PEX10O60683 326 aa21.53■■□□□ 1.04
NPC2-208ENST00000556009 MAPK4P31152 587 aa21.53■■□□□ 1.04
NPC2-208ENST00000556009 ANKLE1Q8NAG6 615 aa21.53■■□□□ 1.04
NPC2-208ENST00000556009 RIOK1Q9BRS2 568 aaKnown RBP21.53■■□□□ 1.04
NPC2-208ENST00000556009 PRO3102Q9H379 93 aa21.53■■□□□ 1.04
NPC2-208ENST00000556009 HMX1Q9NP08 348 aaPredicted RBP21.53■■□□□ 1.04
NPC2-208ENST00000556009 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.52■■□□□ 1.04
NPC2-208ENST00000556009 SOCS4Q8WXH5 440 aa21.52■■□□□ 1.04
NPC2-208ENST00000556009 NUDT12Q9BQG2 462 aa21.52■■□□□ 1.04
NPC2-208ENST00000556009 IL1RAPL2Q9NP60 686 aa21.52■■□□□ 1.04
NPC2-208ENST00000556009 Q3C1V9 767 aa21.51■■□□□ 1.03
NPC2-208ENST00000556009 CERKLQ49MI3 558 aaPredicted RBP21.51■■□□□ 1.03
NPC2-208ENST00000556009 NECAB2Q7Z6G3 386 aa21.51■■□□□ 1.03
NPC2-208ENST00000556009 CLASRPQ8N2M8 674 aaKnown RBP21.51■■□□□ 1.03
NPC2-208ENST00000556009 TRIB2Q92519 343 aa21.51■■□□□ 1.03
NPC2-208ENST00000556009 KIF1BPQ96EK5 621 aa21.51■■□□□ 1.03
NPC2-208ENST00000556009 RBM27Q9P2N5 1060 aaKnown RBP21.51■■□□□ 1.03
NPC2-208ENST00000556009 MYH8P13535 1937 aa21.51■■□□□ 1.03
NPC2-208ENST00000556009 USP17L15C9J2P7 530 aa21.5■■□□□ 1.03
NPC2-208ENST00000556009 USP17L13C9JLJ4 530 aa21.5■■□□□ 1.03
NPC2-208ENST00000556009 USP17L11C9JVI0 530 aa21.5■■□□□ 1.03
NPC2-208ENST00000556009 USP17L18D6R9N7 530 aa21.5■■□□□ 1.03
NPC2-208ENST00000556009 USP17L22D6RA61 530 aa21.5■■□□□ 1.03
NPC2-208ENST00000556009 USP17L17D6RBQ6 530 aa21.5■■□□□ 1.03
NPC2-208ENST00000556009 USP17L19D6RCP7 530 aa21.5■■□□□ 1.03
NPC2-208ENST00000556009 USP17L20D6RJB6 530 aa21.5■■□□□ 1.03
NPC2-208ENST00000556009 EVI5O60447 810 aa21.5■■□□□ 1.03
NPC2-208ENST00000556009 CYP2B6P20813 491 aa21.5■■□□□ 1.03
NPC2-208ENST00000556009 USP14P54578 494 aa21.5■■□□□ 1.03
NPC2-208ENST00000556009 ERVK-9P63128 1117 aa21.5■■□□□ 1.03
NPC2-208ENST00000556009 ERVK-24P63145 666 aa21.5■■□□□ 1.03
NPC2-208ENST00000556009 USP17L24Q0WX57 530 aa21.5■■□□□ 1.03
NPC2-208ENST00000556009 TRIM32Q13049 653 aa21.5■■□□□ 1.03
NPC2-208ENST00000556009 MAP3K21Q5TCX8 1036 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms