RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 HLA-CQ95604 372 aa8.25□□□□□ -1.09
SLIRP-204ENST00000555890 ISCA1Q9BUE6 129 aa8.25□□□□□ -1.09
SLIRP-204ENST00000555890 COPRSQ9NQ92 184 aa8.25□□□□□ -1.09
SLIRP-204ENST00000555890 ZNF609O15014 1411 aa8.25□□□□□ -1.09
SLIRP-204ENST00000555890 FAM208BQ5VWN6 2430 aa8.24□□□□□ -1.09
SLIRP-204ENST00000555890 ERVV-1B6SEH8 477 aa8.24□□□□□ -1.09
SLIRP-204ENST00000555890 GLRX3O76003 335 aaKnown RBP8.24□□□□□ -1.09
SLIRP-204ENST00000555890 CAMTA2O94983 1202 aa8.24□□□□□ -1.09
SLIRP-204ENST00000555890 BMP1P13497 986 aa8.24□□□□□ -1.09
SLIRP-204ENST00000555890 GJA8P48165 433 aa8.24□□□□□ -1.09
SLIRP-204ENST00000555890 SREBF2Q12772 1141 aa8.24□□□□□ -1.09
SLIRP-204ENST00000555890 EPHA10Q5JZY3 1008 aa8.24□□□□□ -1.09
SLIRP-204ENST00000555890 ADGRD1Q6QNK2 874 aa8.24□□□□□ -1.09
SLIRP-204ENST00000555890 RTKN2Q8IZC4 609 aa8.24□□□□□ -1.09
SLIRP-204ENST00000555890 EPS8L1Q8TE68 723 aa8.24□□□□□ -1.09
SLIRP-204ENST00000555890 JARID2Q92833 1246 aaPredicted RBP8.24□□□□□ -1.09
SLIRP-204ENST00000555890 RILPL2Q969X0 211 aa8.24□□□□□ -1.09
SLIRP-204ENST00000555890 PA2G4Q9UQ80 394 aaKnown RBP8.24□□□□□ -1.09
SLIRP-204ENST00000555890 PTCH2Q9Y6C5 1203 aa8.24□□□□□ -1.09
SLIRP-204ENST00000555890 POLR2AP24928 1970 aaKnown RBP8.24□□□□□ -1.09
SLIRP-204ENST00000555890 WDFY4Q6ZS81 3184 aa8.24□□□□□ -1.09
SLIRP-204ENST00000555890 SCN7AQ01118 1682 aa8.24□□□□□ -1.09
SLIRP-204ENST00000555890 NCOR2Q9Y618 2525 aa8.24□□□□□ -1.09
SLIRP-204ENST00000555890 PCCAP05165 728 aaPredicted RBP8.23□□□□□ -1.09
SLIRP-204ENST00000555890 NPR1P16066 1061 aa8.23□□□□□ -1.09
SLIRP-204ENST00000555890 SLC4A3P48751 1232 aa8.23□□□□□ -1.09
SLIRP-204ENST00000555890 CASP7P55210 303 aa8.23□□□□□ -1.09
SLIRP-204ENST00000555890 FOXO4P98177 505 aa8.23□□□□□ -1.09
SLIRP-204ENST00000555890 ARHGEF6Q15052 776 aa8.23□□□□□ -1.09
SLIRP-204ENST00000555890 PROX2Q3B8N5 592 aa8.23□□□□□ -1.09
SLIRP-204ENST00000555890 LMBR1LQ6UX01 489 aa8.23□□□□□ -1.09
SLIRP-204ENST00000555890 AACSQ86V21 672 aa8.23□□□□□ -1.09
SLIRP-204ENST00000555890 DZIP3Q86Y13 1208 aaKnown RBP8.23□□□□□ -1.09
SLIRP-204ENST00000555890 CNBD1Q8NA66 436 aa8.23□□□□□ -1.09
SLIRP-204ENST00000555890 PSMD1Q99460 953 aa8.23□□□□□ -1.09
SLIRP-204ENST00000555890 ECHDC1Q9NTX5 307 aa8.23□□□□□ -1.09
SLIRP-204ENST00000555890 GPRC5DQ9NZD1 345 aa8.23□□□□□ -1.09
SLIRP-204ENST00000555890 GNEQ9Y223 722 aaKnown RBP8.23□□□□□ -1.09
SLIRP-204ENST00000555890 CHMP3Q9Y3E7 222 aa8.23□□□□□ -1.09
SLIRP-204ENST00000555890 MYH3P11055 1940 aa8.23□□□□□ -1.09
SLIRP-204ENST00000555890 PI4K2BG5E9Z4 385 aa8.22□□□□□ -1.09
SLIRP-204ENST00000555890 ATP9BO43861 1147 aa8.22□□□□□ -1.09
SLIRP-204ENST00000555890 SASH1O94885 1247 aa8.22□□□□□ -1.09
SLIRP-204ENST00000555890 RFX5P48382 616 aaPredicted RBP8.22□□□□□ -1.09
SLIRP-204ENST00000555890 SWT1Q5T5J6 900 aaKnown RBP8.22□□□□□ -1.09
SLIRP-204ENST00000555890 ZBTB38Q8NAP3 1195 aaPredicted RBP8.22□□□□□ -1.09
SLIRP-204ENST00000555890 ANP32EQ9BTT0 268 aa8.22□□□□□ -1.09
SLIRP-204ENST00000555890 SIL1Q9H173 461 aa8.22□□□□□ -1.09
SLIRP-204ENST00000555890 CDHR2Q9BYE9 1310 aa8.22□□□□□ -1.09
SLIRP-204ENST00000555890 DCHS1Q96JQ0 3298 aa8.21□□□□□ -1.09
SLIRP-204ENST00000555890 GJB1P08034 283 aa8.21□□□□□ -1.1
SLIRP-204ENST00000555890 HSP90B1P14625 803 aaKnown RBP8.21□□□□□ -1.1
SLIRP-204ENST00000555890 MCCP23508 829 aa8.21□□□□□ -1.1
SLIRP-204ENST00000555890 CHMLP26374 656 aa8.21□□□□□ -1.1
SLIRP-204ENST00000555890 IL15P40933 162 aaPredicted RBP8.21□□□□□ -1.1
SLIRP-204ENST00000555890 PTPN12Q05209 780 aaKnown RBP8.21□□□□□ -1.1
SLIRP-204ENST00000555890 NR6A1Q15406 480 aa8.21□□□□□ -1.1
SLIRP-204ENST00000555890 CCDC57Q2TAC2 916 aa8.21□□□□□ -1.1
SLIRP-204ENST00000555890 TSHZ3Q63HK5 1081 aa8.21□□□□□ -1.1
SLIRP-204ENST00000555890 NLRP10Q86W26 655 aa8.21□□□□□ -1.1
SLIRP-204ENST00000555890 HSCBQ8IWL3 235 aa8.21□□□□□ -1.1
SLIRP-204ENST00000555890 C7orf61Q8IZ16 206 aa8.21□□□□□ -1.1
SLIRP-204ENST00000555890 PI4K2BQ8TCG2 481 aa8.21□□□□□ -1.1
SLIRP-204ENST00000555890 SH3TC2Q8TF17 1288 aa8.21□□□□□ -1.1
SLIRP-204ENST00000555890 SETDB2Q96T68 719 aa8.21□□□□□ -1.1
SLIRP-204ENST00000555890 PLA2G12BQ9BX93 195 aa8.21□□□□□ -1.1
SLIRP-204ENST00000555890 USP26Q9BXU7 913 aa8.21□□□□□ -1.1
SLIRP-204ENST00000555890 TTYH1Q9H313 450 aaPredicted RBP8.21□□□□□ -1.1
SLIRP-204ENST00000555890 SH2B1Q9NRF2 756 aaPredicted RBP8.21□□□□□ -1.1
SLIRP-204ENST00000555890 KIAA1468Q9P260 1216 aa8.21□□□□□ -1.1
SLIRP-204ENST00000555890 PTPRZ1P23471 2315 aaPredicted RBP8.21□□□□□ -1.1
SLIRP-204ENST00000555890 GCN1Q92616 2671 aaKnown RBP8.2□□□□□ -1.1
SLIRP-204ENST00000555890 EYA2O00167 538 aa8.2□□□□□ -1.1
SLIRP-204ENST00000555890 HIP1O00291 1037 aa8.2□□□□□ -1.1
SLIRP-204ENST00000555890 EPB41L2O43491 1005 aaKnown RBP8.2□□□□□ -1.1
SLIRP-204ENST00000555890 CIAO1O76071 339 aa8.2□□□□□ -1.1
SLIRP-204ENST00000555890 SYN1P17600 705 aa8.2□□□□□ -1.1
SLIRP-204ENST00000555890 ST5P78524 1137 aa8.2□□□□□ -1.1
SLIRP-204ENST00000555890 ELOAQ14241 798 aaKnown RBP8.2□□□□□ -1.1
SLIRP-204ENST00000555890 HLFQ16534 295 aa8.2□□□□□ -1.1
SLIRP-204ENST00000555890 PARP10Q53GL7 1025 aa8.2□□□□□ -1.1
SLIRP-204ENST00000555890 ZNF34Q8IZ26 560 aa8.2□□□□□ -1.1
SLIRP-204ENST00000555890 KLHDC4Q8TBB5 520 aa8.2□□□□□ -1.1
SLIRP-204ENST00000555890 RUFY2Q8WXA3 655 aa8.2□□□□□ -1.1
SLIRP-204ENST00000555890 PPM1EQ8WY54 764 aa8.2□□□□□ -1.1
SLIRP-204ENST00000555890 EAF2Q96CJ1 260 aaPredicted RBP8.2□□□□□ -1.1
SLIRP-204ENST00000555890 EVI5LQ96CN4 794 aa8.2□□□□□ -1.1
SLIRP-204ENST00000555890 KCNK17Q96T54 332 aa8.2□□□□□ -1.1
SLIRP-204ENST00000555890 ESYT1Q9BSJ8 1104 aa8.2□□□□□ -1.1
SLIRP-204ENST00000555890 CCDC8Q9H0W5 538 aaPredicted RBP8.2□□□□□ -1.1
SLIRP-204ENST00000555890 GPR108Q9NPR9 543 aa8.2□□□□□ -1.1
SLIRP-204ENST00000555890 TRMT112Q9UI30 125 aaKnown RBP8.2□□□□□ -1.1
SLIRP-204ENST00000555890 ZNF652Q9Y2D9 606 aa8.2□□□□□ -1.1
SLIRP-204ENST00000555890 CDH23Q9H251 3354 aa8.2□□□□□ -1.1
SLIRP-204ENST00000555890 COL2A1P02458 1487 aaPredicted RBP8.19□□□□□ -1.1
SLIRP-204ENST00000555890 SHTN1A0MZ66 631 aa8.19□□□□□ -1.1
SLIRP-204ENST00000555890 ARHGAP33O14559 1287 aa8.19□□□□□ -1.1
SLIRP-204ENST00000555890 CSF1RP07333 972 aa8.19□□□□□ -1.1
SLIRP-204ENST00000555890 GPTP24298 496 aa8.19□□□□□ -1.1
SLIRP-204ENST00000555890 FUT2Q10981 343 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms