RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 NEDD1Q8NHV4 660 aa14.72□□□□□ -0.05
SHMT2-221ENST00000555773 JAKMIP1Q96N16 626 aaKnown RBP14.72□□□□□ -0.05
SHMT2-221ENST00000555773 ZSWIM6Q9HCJ5 1215 aa14.72□□□□□ -0.05
SHMT2-221ENST00000555773 TCP11L1Q9NUJ3 509 aa14.72□□□□□ -0.05
SHMT2-221ENST00000555773 ZSWIM5Q9P217 1185 aa14.72□□□□□ -0.05
SHMT2-221ENST00000555773 NEDD4P46934 1319 aa14.71□□□□□ -0.05
SHMT2-221ENST00000555773 PASKQ96RG2 1323 aa14.71□□□□□ -0.05
SHMT2-221ENST00000555773 TSPY2A6NKD2 308 aa14.71□□□□□ -0.05
SHMT2-221ENST00000555773 B4E1Z4 1266 aa14.71□□□□□ -0.05
SHMT2-221ENST00000555773 KDM4AO75164 1064 aa14.71□□□□□ -0.05
SHMT2-221ENST00000555773 ASNSP08243 561 aa14.71□□□□□ -0.05
SHMT2-221ENST00000555773 TSPY3P0CV98 308 aa14.71□□□□□ -0.05
SHMT2-221ENST00000555773 TSPY8P0CW00 308 aa14.71□□□□□ -0.05
SHMT2-221ENST00000555773 SLURP2P0DP57 97 aa14.71□□□□□ -0.05
SHMT2-221ENST00000555773 MCM5P33992 734 aa14.71□□□□□ -0.05
SHMT2-221ENST00000555773 TTLL12Q14166 644 aaPredicted RBP14.71□□□□□ -0.05
SHMT2-221ENST00000555773 ABCB5Q2M3G0 1257 aa14.71□□□□□ -0.05
SHMT2-221ENST00000555773 ADCK5Q3MIX3 580 aa14.71□□□□□ -0.05
SHMT2-221ENST00000555773 BLOC1S2Q6QNY1 142 aa14.71□□□□□ -0.05
SHMT2-221ENST00000555773 TMEM179Q6ZVK1 233 aa14.71□□□□□ -0.05
SHMT2-221ENST00000555773 DHX32Q7L7V1 743 aaKnown RBP14.71□□□□□ -0.05
SHMT2-221ENST00000555773 IQCA1Q86XH1 822 aa14.71□□□□□ -0.05
SHMT2-221ENST00000555773 MB21D2Q8IYB1 491 aaPredicted RBP14.71□□□□□ -0.05
SHMT2-221ENST00000555773 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.71□□□□□ -0.058e-7■■□□□ 11.7
SHMT2-221ENST00000555773 WRNIP1Q96S55 665 aa14.71□□□□□ -0.05
SHMT2-221ENST00000555773 GBA2Q9HCG7 927 aaPredicted RBP14.71□□□□□ -0.05
SHMT2-221ENST00000555773 ANGEL1Q9UNK9 670 aaKnown RBP14.71□□□□□ -0.05
SHMT2-221ENST00000555773 WDR19Q8NEZ3 1342 aa14.7□□□□□ -0.06
SHMT2-221ENST00000555773 AKR1B1P15121 316 aa14.7□□□□□ -0.06
SHMT2-221ENST00000555773 EXOSC10Q01780 885 aaKnown RBP14.7□□□□□ -0.06
SHMT2-221ENST00000555773 FMR1Q06787 632 aaKnown RBP eCLIP14.7□□□□□ -0.06
SHMT2-221ENST00000555773 PRKG1Q13976 671 aa14.7□□□□□ -0.06
SHMT2-221ENST00000555773 FAM47AQ5JRC9 791 aa14.7□□□□□ -0.06
SHMT2-221ENST00000555773 NOL9Q5SY16 702 aaKnown RBP14.7□□□□□ -0.06
SHMT2-221ENST00000555773 LDLRAD1Q5T700 205 aa14.7□□□□□ -0.06
SHMT2-221ENST00000555773 CST9Q5W186 159 aa14.7□□□□□ -0.06
SHMT2-221ENST00000555773 RUFY3Q7L099 469 aa14.7□□□□□ -0.06
SHMT2-221ENST00000555773 ANKRD13AQ8IZ07 590 aa14.7□□□□□ -0.06
SHMT2-221ENST00000555773 ZNF408Q9H9D4 720 aa14.7□□□□□ -0.06
SHMT2-221ENST00000555773 KANSL2Q9H9L4 492 aa14.7□□□□□ -0.06
SHMT2-221ENST00000555773 CYP46A1Q9Y6A2 500 aa14.7□□□□□ -0.06
SHMT2-221ENST00000555773 FOCADQ5VW36 1801 aa14.7□□□□□ -0.06
SHMT2-221ENST00000555773 MPHOSPH10O00566 681 aaKnown RBP14.69□□□□□ -0.06
SHMT2-221ENST00000555773 GH2P01242 217 aa14.69□□□□□ -0.06
SHMT2-221ENST00000555773 CASTP20810 708 aaKnown RBP14.69□□□□□ -0.06
SHMT2-221ENST00000555773 INPP5BP32019 993 aa14.69□□□□□ -0.06
SHMT2-221ENST00000555773 RRP1BQ14684 758 aaKnown RBP14.69□□□□□ -0.06
SHMT2-221ENST00000555773 SART3Q15020 963 aaKnown RBP14.69□□□□□ -0.06
SHMT2-221ENST00000555773 SCYL3Q8IZE3 742 aa14.69□□□□□ -0.06
SHMT2-221ENST00000555773 TMEM87BQ96K49 555 aa14.69□□□□□ -0.06
SHMT2-221ENST00000555773 TTC14Q96N46 770 aa14.69□□□□□ -0.06
SHMT2-221ENST00000555773 PICK1Q9NRD5 415 aa14.69□□□□□ -0.06
SHMT2-221ENST00000555773 CSADQ9Y600 493 aa14.69□□□□□ -0.06
SHMT2-221ENST00000555773 POLR2AP24928 1970 aaKnown RBP14.69□□□□□ -0.06
SHMT2-221ENST00000555773 SSC5DA1L4H1 1573 aa14.68□□□□□ -0.06
SHMT2-221ENST00000555773 MYH1P12882 1939 aa14.68□□□□□ -0.06
SHMT2-221ENST00000555773 PRC1O43663 620 aa14.68□□□□□ -0.06
SHMT2-221ENST00000555773 GDF11O95390 407 aa14.68□□□□□ -0.06
SHMT2-221ENST00000555773 RPS6KB1P23443 525 aa14.68□□□□□ -0.06
SHMT2-221ENST00000555773 RABEP1Q15276 862 aa14.68□□□□□ -0.06
SHMT2-221ENST00000555773 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-221ENST00000555773 CYB5R4Q7L1T6 521 aa14.68□□□□□ -0.06
SHMT2-221ENST00000555773 DGKHQ86XP1 1220 aa14.68□□□□□ -0.06
SHMT2-221ENST00000555773 TMTC2Q8N394 836 aa14.68□□□□□ -0.06
SHMT2-221ENST00000555773 FBXL16Q8N461 479 aa14.68□□□□□ -0.06
SHMT2-221ENST00000555773 ZKSCAN4Q969J2 545 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-221ENST00000555773 ZSCAN10Q96SZ4 725 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-221ENST00000555773 KIF2CQ99661 725 aa14.68□□□□□ -0.06
SHMT2-221ENST00000555773 UBAC1Q9BSL1 405 aa14.68□□□□□ -0.06
SHMT2-221ENST00000555773 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.68□□□□□ -0.065e-8■■■□□ 18.8
SHMT2-221ENST00000555773 TBC1D2Q9BYX2 928 aa14.68□□□□□ -0.06
SHMT2-221ENST00000555773 ZBTB21Q9ULJ3 1066 aa14.68□□□□□ -0.06
SHMT2-221ENST00000555773 DDX60LQ5H9U9 1706 aaKnown RBP14.68□□□□□ -0.06
SHMT2-221ENST00000555773 PLIN4Q96Q06 1357 aa14.68□□□□□ -0.06
SHMT2-221ENST00000555773 BAZ2AQ9UIF9 1905 aaKnown RBP14.68□□□□□ -0.06
SHMT2-221ENST00000555773 NAV1Q8NEY1 1877 aa14.67□□□□□ -0.06
SHMT2-221ENST00000555773 CDK5RAP2Q96SN8 1893 aa14.67□□□□□ -0.06
SHMT2-221ENST00000555773 IGKV6D-41A0A0C4DH26 115 aa14.67□□□□□ -0.06
SHMT2-221ENST00000555773 ERICH2A1L162 156 aa14.67□□□□□ -0.06
SHMT2-221ENST00000555773 USP17L5A8MUK1 530 aa14.67□□□□□ -0.06
SHMT2-221ENST00000555773 UBE2Q2LH0YL09 131 aa14.67□□□□□ -0.06
SHMT2-221ENST00000555773 IFIT3O14879 490 aaKnown RBP14.67□□□□□ -0.06
SHMT2-221ENST00000555773 NOVP48745 357 aa14.67□□□□□ -0.06
SHMT2-221ENST00000555773 JAG1P78504 1218 aa14.67□□□□□ -0.06
SHMT2-221ENST00000555773 IGDCC4Q8TDY8 1250 aa14.67□□□□□ -0.06
SHMT2-221ENST00000555773 ANKS1AQ92625 1134 aa14.67□□□□□ -0.06
SHMT2-221ENST00000555773 SLC10A4Q96EP9 437 aa14.67□□□□□ -0.06
SHMT2-221ENST00000555773 ALDH8A1Q9H2A2 487 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-221ENST00000555773 IL17RBQ9NRM6 502 aa14.67□□□□□ -0.06
SHMT2-221ENST00000555773 MTMR4Q9NYA4 1195 aa14.67□□□□□ -0.06
SHMT2-221ENST00000555773 NYAP2Q9P242 653 aa14.67□□□□□ -0.06
SHMT2-221ENST00000555773 FZD1Q9UP38 647 aa14.67□□□□□ -0.06
SHMT2-221ENST00000555773 TMEM88BA6NKF7 163 aa14.66□□□□□ -0.06
SHMT2-221ENST00000555773 TTLL1O95922 423 aa14.66□□□□□ -0.06
SHMT2-221ENST00000555773 PTPRAP18433 802 aa14.66□□□□□ -0.06
SHMT2-221ENST00000555773 GUCY1A2P33402 732 aa14.66□□□□□ -0.06
SHMT2-221ENST00000555773 LIFRP42702 1097 aa14.66□□□□□ -0.06
SHMT2-221ENST00000555773 NEK4P51957 841 aa14.66□□□□□ -0.06
SHMT2-221ENST00000555773 ANTXR2P58335 489 aa14.66□□□□□ -0.06
SHMT2-221ENST00000555773 VGLL4Q14135 290 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms