RNA–Protein interactions for RNA: ENST00000555612.5

SYNE2-220, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 6,766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-220ENST00000555612 PCCAP05165 728 aaPredicted RBP9.2□□□□□ -0.94
SYNE2-220ENST00000555612 HERC4Q5GLZ8 1057 aaPredicted RBP9.2□□□□□ -0.94
SYNE2-220ENST00000555612 RNF187Q5TA31 235 aaPredicted RBP9.2□□□□□ -0.94
SYNE2-220ENST00000555612 REXO1Q8N1G1 1221 aaKnown RBP9.2□□□□□ -0.94
SYNE2-220ENST00000555612 RAB3IL1Q8TBN0 382 aa9.2□□□□□ -0.94
SYNE2-220ENST00000555612 LEO1Q8WVC0 666 aaPredicted RBP9.2□□□□□ -0.94
SYNE2-220ENST00000555612 POLR3GO15318 223 aaPredicted RBP9.2□□□□□ -0.94
SYNE2-220ENST00000555612 ZBTB24O43167 697 aaPredicted RBP9.2□□□□□ -0.94
SYNE2-220ENST00000555612 CD19P15391 556 aa9.2□□□□□ -0.94
SYNE2-220ENST00000555612 UVSSAQ2YD98 709 aa9.2□□□□□ -0.94
SYNE2-220ENST00000555612 CNNM4Q6P4Q7 775 aa9.2□□□□□ -0.94
SYNE2-220ENST00000555612 GREM2Q9H772 168 aa9.2□□□□□ -0.94
SYNE2-220ENST00000555612 AGTPBP1Q9UPW5 1226 aa9.2□□□□□ -0.94
SYNE2-220ENST00000555612 SKILP12757 684 aa9.19□□□□□ -0.94
SYNE2-220ENST00000555612 HAUS7Q99871 368 aa9.19□□□□□ -0.94
SYNE2-220ENST00000555612 KDM5DQ9BY66 1539 aa9.19□□□□□ -0.94
SYNE2-220ENST00000555612 ERCC3P19447 782 aa9.19□□□□□ -0.94
SYNE2-220ENST00000555612 NOX5Q96PH1 765 aa9.19□□□□□ -0.94
SYNE2-220ENST00000555612 FAM107BQ9H098 131 aa9.19□□□□□ -0.94
SYNE2-220ENST00000555612 GUCA1BQ9UMX6 200 aa9.19□□□□□ -0.94
SYNE2-220ENST00000555612 METP08581 1390 aa9.19□□□□□ -0.94
SYNE2-220ENST00000555612 ELP1O95163 1332 aa9.19□□□□□ -0.94
SYNE2-220ENST00000555612 SMCO2A6NFE2 343 aa9.19□□□□□ -0.94
SYNE2-220ENST00000555612 TNFAIP3P21580 790 aa9.19□□□□□ -0.94
SYNE2-220ENST00000555612 KCTD2Q14681 263 aa9.19□□□□□ -0.94
SYNE2-220ENST00000555612 LRRC24Q50LG9 513 aa9.19□□□□□ -0.94
SYNE2-220ENST00000555612 SMC5Q8IY18 1101 aa9.19□□□□□ -0.94
SYNE2-220ENST00000555612 DEPTORQ8TB45 409 aa9.19□□□□□ -0.94
SYNE2-220ENST00000555612 CAPZA3Q96KX2 299 aa9.19□□□□□ -0.94
SYNE2-220ENST00000555612 CCDC77Q9BR77 488 aa9.19□□□□□ -0.94
SYNE2-220ENST00000555612 EXOC3O60645 756 aa9.19□□□□□ -0.94
SYNE2-220ENST00000555612 PRPF6O94906 941 aaKnown RBP9.19□□□□□ -0.94
SYNE2-220ENST00000555612 GOLGA8HP0CJ92 632 aa9.19□□□□□ -0.94
SYNE2-220ENST00000555612 IGBP1P78318 339 aa9.19□□□□□ -0.94
SYNE2-220ENST00000555612 NELFCDQ8IXH7 590 aa9.19□□□□□ -0.94
SYNE2-220ENST00000555612 USP26Q9BXU7 913 aa9.19□□□□□ -0.94
SYNE2-220ENST00000555612 VPS54Q9P1Q0 977 aa9.19□□□□□ -0.94
SYNE2-220ENST00000555612 LUC7L2Q9Y383 392 aaKnown RBP9.19□□□□□ -0.94
SYNE2-220ENST00000555612 PLEKHG1Q9ULL1 1385 aa9.19□□□□□ -0.94
SYNE2-220ENST00000555612 KRT86O43790 486 aa9.19□□□□□ -0.94
SYNE2-220ENST00000555612 GCNT3O95395 438 aa9.19□□□□□ -0.94
SYNE2-220ENST00000555612 ERFEQ4G0M1 354 aa9.19□□□□□ -0.94
SYNE2-220ENST00000555612 STK24Q9Y6E0 443 aa9.19□□□□□ -0.94
SYNE2-220ENST00000555612 CTAGE15A4D2H0 777 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 TMEM232C9JQI7 657 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 GAS8O95995 478 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 CTAGE8P0CG41 777 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 SNX16P57768 344 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 TYRO3Q06418 890 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 ABCB5Q2M3G0 1257 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 ANO1Q5XXA6 986 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 CCDC186Q7Z3E2 898 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 CTAGE6Q86UF2 777 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 CTAGE4Q8IX94 777 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 ZNF830Q96NB3 372 aaPredicted RBP9.18□□□□□ -0.94
SYNE2-220ENST00000555612 CSRNP1Q96S65 589 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 PPP1R9BQ96SB3 815 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 CETN3O15182 167 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 HSF2BPO75031 334 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 CSPG5O95196 566 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 POLR2MP0CAP2 368 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 FAM102BQ5T8I3 360 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 FAM193BQ96PV7 902 aaPredicted RBP9.18□□□□□ -0.94
SYNE2-220ENST00000555612 UGGT1Q9NYU2 1555 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 DNAI1Q9UI46 699 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 PPP1R7Q15435 360 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 CCDC93Q567U6 631 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 OTUD6AQ7L8S5 288 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 ARMC9Q7Z3E5 817 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 MRPL44Q9H9J2 332 aaKnown RBP9.18□□□□□ -0.94
SYNE2-220ENST00000555612 SUGCTQ9HAC7 445 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 PRKAG2Q9UGJ0 569 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 MRPL11Q9Y3B7 192 aaKnown RBP9.18□□□□□ -0.94
SYNE2-220ENST00000555612 SNX14Q9Y5W7 946 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 WDR17Q8IZU2 1322 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 KDRP35968 1356 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 ADCY10Q96PN6 1610 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 PALM3A6NDB9 673 aaPredicted RBP9.18□□□□□ -0.94
SYNE2-220ENST00000555612 DTNBO60941 627 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 NR1I2O75469 434 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 SPICE1Q8N0Z3 855 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 CMTR1Q8N1G2 835 aaKnown RBP9.18□□□□□ -0.94
SYNE2-220ENST00000555612 SRP68Q9UHB9 627 aaKnown RBP9.18□□□□□ -0.94
SYNE2-220ENST00000555612 MLH3Q9UHC1 1453 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 SPOPO43791 374 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 CCNA1P78396 465 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 KCNH3Q9ULD8 1083 aa9.18□□□□□ -0.94
SYNE2-220ENST00000555612 IL6STP40189 918 aaPredicted RBP9.17□□□□□ -0.94
SYNE2-220ENST00000555612 PRR16Q569H4 304 aa9.17□□□□□ -0.94
SYNE2-220ENST00000555612 CEP63Q96MT8 703 aa9.17□□□□□ -0.94
SYNE2-220ENST00000555612 CCPG1Q9ULG6 757 aa9.17□□□□□ -0.94
SYNE2-220ENST00000555612 AFF2P51816 1311 aa9.17□□□□□ -0.94
SYNE2-220ENST00000555612 EFCAB6Q5THR3 1501 aa9.17□□□□□ -0.94
SYNE2-220ENST00000555612 ABL1P00519 1130 aa9.17□□□□□ -0.94
SYNE2-220ENST00000555612 GABPAQ06546 454 aa9.17□□□□□ -0.94
SYNE2-220ENST00000555612 KARSQ15046 597 aaKnown RBP9.17□□□□□ -0.94
SYNE2-220ENST00000555612 SUPT20HL1Q3ZLR7 823 aa9.17□□□□□ -0.94
SYNE2-220ENST00000555612 CCDC14Q49A88 953 aa9.17□□□□□ -0.94
SYNE2-220ENST00000555612 SLFN13Q68D06 897 aa9.17□□□□□ -0.94
SYNE2-220ENST00000555612 CCDC25Q86WR0 208 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms